EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00021857 (Gene tree)
Gene ID: -
Gene Symbol: iffb-1
Alias: -
Full Name: Eukaryotic translation initiation factor eIF5B%3B Initiation Factor Five B (eIF5B)
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 12466 bases
Position: chrIII:2314436-2326901
Accession: G5EGT7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y54F10BM	IF-2	PF11987.8	1.9e-18	1	1
Y54F10BM	GTP_EFTU	PF00009.27	8.7e-32	1	1
Y54F10BM	MMR_HSR1	PF01926.23	1.8e-06	1	1
Y54F10BM	GTP_EFTU_D2	PF03144.25	6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y54F10BM.2	-	3655	NM_065135	Y54F10BM.2	1074 (aa)	NP_497536	G5EGT7

Gene Model

Click here to download WBGene00021857's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00021857's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00021857	iffb-1	58	57.395	ENSAPOG00000004375	eif5b	52	57.395	Acanthochromis_polyacanthus
WBGene00021857	iffb-1	58	57.235	ENSACIG00000024324	eif5b	62	57.235	Amphilophus_citrinellus
WBGene00021857	iffb-1	58	57.717	ENSAOCG00000018386	eif5b	52	57.717	Amphiprion_ocellaris
WBGene00021857	iffb-1	58	57.717	ENSATEG00000006765	eif5b	50	57.717	Anabas_testudineus
WBGene00021857	iffb-1	58	57.717	ENSATEG00000011259	eif5b	63	57.717	Anabas_testudineus
WBGene00021857	iffb-1	56	58.264	ENSATEG00000011451	-	61	58.264	Anabas_testudineus
WBGene00021857	iffb-1	58	57.878	ENSACAG00000008305	-	52	57.878	Anolis_carolinensis
WBGene00021857	iffb-1	58	57.556	ENSACLG00000005530	eif5b	63	57.556	Astatotilapia_calliptera
WBGene00021857	iffb-1	58	57.878	ENSAMXG00000018383	eif5b	52	57.878	Astyanax_mexicanus
WBGene00021857	iffb-1	74	46.459	ENSCAPG00000014619	-	50	55.649	Cavia_aperea
WBGene00021857	iffb-1	62	55.038	ENSCPOG00000011967	-	51	56.543	Cavia_porcellus
WBGene00021857	iffb-1	57	56.149	ENSCSAVG00000008808	-	67	55.821	Ciona_savignyi
WBGene00021857	iffb-1	58	57.878	ENSCSEG00000014153	eif5b	51	57.878	Cynoglossus_semilaevis
WBGene00021857	iffb-1	58	57.235	ENSCVAG00000019619	eif5b	52	57.235	Cyprinodon_variegatus
WBGene00021857	iffb-1	58	58.805	FBgn0026259	eIF5B	54	58.805	Drosophila_melanogaster
WBGene00021857	iffb-1	58	57.027	ENSELUG00000001132	eif5b	58	57.027	Esox_lucius
WBGene00021857	iffb-1	58	57.188	ENSGMOG00000002031	eif5b	53	57.561	Gadus_morhua
WBGene00021857	iffb-1	58	57.074	ENSGACG00000010536	eif5b	85	57.074	Gasterosteus_aculeatus
WBGene00021857	iffb-1	57	57.516	ENSGAGG00000022242	-	91	57.236	Gopherus_agassizii
WBGene00021857	iffb-1	58	57.556	ENSHBUG00000023319	eif5b	52	57.556	Haplochromis_burtoni
WBGene00021857	iffb-1	58	57.556	ENSHCOG00000002807	eif5b	52	57.556	Hippocampus_comes
WBGene00021857	iffb-1	58	56.913	ENSIPUG00000020910	eif5b	53	56.913	Ictalurus_punctatus
WBGene00021857	iffb-1	58	56.300	ENSLACG00000011688	eif5b	51	56.452	Latimeria_chalumnae
WBGene00021857	iffb-1	58	57.717	ENSMAMG00000022568	eif5b	51	57.717	Mastacembelus_armatus
WBGene00021857	iffb-1	58	57.556	ENSMZEG00005012696	eif5b	52	57.556	Maylandia_zebra
WBGene00021857	iffb-1	61	55.623	ENSMODG00000001387	-	52	56.913	Monodelphis_domestica
WBGene00021857	iffb-1	77	49.243	ENSMALG00000005862	eif5b	73	48.430	Monopterus_albus
WBGene00021857	iffb-1	58	57.235	ENSNBRG00000021912	eif5b	77	48.944	Neolamprologus_brichardi
WBGene00021857	iffb-1	58	57.556	ENSONIG00000018749	eif5b	52	57.556	Oreochromis_niloticus
WBGene00021857	iffb-1	74	49.148	ENSOANG00000004621	-	53	57.395	Ornithorhynchus_anatinus
WBGene00021857	iffb-1	58	56.752	ENSOCUG00000021154	-	51	56.752	Oryctolagus_cuniculus
WBGene00021857	iffb-1	58	58.039	ENSORLG00000001525	eif5b	52	58.039	Oryzias_latipes
WBGene00021857	iffb-1	58	57.878	ENSORLG00020005327	eif5b	53	57.878	Oryzias_latipes_hni
WBGene00021857	iffb-1	58	58.039	ENSORLG00015008949	eif5b	52	58.039	Oryzias_latipes_hsok
WBGene00021857	iffb-1	66	52.660	ENSOMEG00000016539	eif5b	79	57.717	Oryzias_melastigma
WBGene00021857	iffb-1	58	56.109	ENSPKIG00000011133	eif5b	51	56.109	Paramormyrops_kingsleyae
WBGene00021857	iffb-1	74	47.694	ENSPMAG00000004508	eif5b	71	46.330	Petromyzon_marinus
WBGene00021857	iffb-1	58	56.592	ENSPFOG00000007543	eif5b	89	57.447	Poecilia_formosa
WBGene00021857	iffb-1	58	56.592	ENSPLAG00000015913	eif5b	72	47.886	Poecilia_latipinna
WBGene00021857	iffb-1	58	56.592	ENSPMEG00000006712	eif5b	73	47.398	Poecilia_mexicana
WBGene00021857	iffb-1	61	51.286	ENSPCAG00000007829	-	51	52.894	Procavia_capensis
WBGene00021857	iffb-1	58	53.376	ENSPCOG00000019508	-	100	54.662	Propithecus_coquereli
WBGene00021857	iffb-1	58	57.556	ENSPNYG00000021051	eif5b	63	57.556	Pundamilia_nyererei
WBGene00021857	iffb-1	77	48.897	ENSPNAG00000023852	eif5b	51	57.395	Pygocentrus_nattereri
WBGene00021857	iffb-1	69	42.968	YAL035W	FUN12	61	48.366	Saccharomyces_cerevisiae
WBGene00021857	iffb-1	58	56.913	ENSSFOG00015000594	eif5b	51	56.913	Scleropages_formosus
WBGene00021857	iffb-1	58	58.360	ENSSMAG00000000045	eif5b	61	58.360	Scophthalmus_maximus
WBGene00021857	iffb-1	74	50.366	ENSSDUG00000005847	eif5b	61	58.199	Seriola_dumerili
WBGene00021857	iffb-1	58	58.360	ENSSLDG00000013738	eif5b	62	58.360	Seriola_lalandi_dorsalis
WBGene00021857	iffb-1	58	55.145	ENSSPAG00000005335	eif5b	61	55.145	Stegastes_partitus
WBGene00021857	iffb-1	58	58.039	ENSTRUG00000007772	eif5b	61	58.039	Takifugu_rubripes
WBGene00021857	iffb-1	75	49.333	ENSTNIG00000006580	eif5b	93	48.958	Tetraodon_nigroviridis
WBGene00021857	iffb-1	75	48.514	ENSXETG00000019377	eif5b	52	57.886	Xenopus_tropicalis