EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00021921 (Gene tree)
Gene ID: -
Gene Symbol: Y55F3AM.3
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 6935 bases
Position: chrIV:1012624-1019558
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y55F3AM	RRM_1	PF00076.22	4.8e-35	1	2
Y55F3AM	RRM_1	PF00076.22	4.8e-35	2	2
Y55F3AM	RRM_1	PF00076.22	4.8e-35	1	2
Y55F3AM	RRM_1	PF00076.22	4.8e-35	2	2
Y55F3AM	RRM_1	PF00076.22	4.8e-35	1	2
Y55F3AM	RRM_1	PF00076.22	4.8e-35	2	2
Y55F3AM	RRM_1	PF00076.22	1.6e-34	1	2
Y55F3AM	RRM_1	PF00076.22	1.6e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y55F3AM.3a	-	2197	NM_067624	Y55F3AM.3a	580 (aa)	NP_500025	Q9N368
Y55F3AM.3b	-	1809	NR_136395	-	- (aa)	-	-
Y55F3AM.3c.2	-	1827	NM_171252	Y55F3AM.3c.2	435 (aa)	NP_741301	Q8MXS6
Y55F3AM.3c.3	-	1727	NM_171252	Y55F3AM.3c.3	435 (aa)	NP_741301	Q8MXS6
Y55F3AM.3c.1	-	2263	-	Y55F3AM.3c.1	435 (aa)	-	Q8MXS6

Gene Model

Click here to download WBGene00021921's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00021921's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00021921	Y55F3AM.3	81	46.721	ENSCING00000020692	-	84	44.975	Ciona_intestinalis
WBGene00021921	Y55F3AM.3	83	46.113	ENSCSAVG00000006572	-	82	45.802	Ciona_savignyi
WBGene00021921	Y55F3AM.3	86	50.129	FBgn0031883	Caper	63	49.871	Drosophila_melanogaster