EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00022025 (Gene tree)
Gene ID: -
Gene Symbol: Y65B4A.1
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 4721 bases
Position: chrI:654090-658810
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y65B4A	RRM_1	PF00076.22	3.9e-15	1	2
Y65B4A	RRM_1	PF00076.22	3.9e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y65B4A.1	-	1533	NM_058364	Y65B4A.1	442 (aa)	NP_490765	Q9BL57

Gene Model

Click here to download WBGene00022025's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00022025's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00022025	Y65B4A.1	71	39.385	ENSG00000102241	HTATSF1	80	40.566	Homo_sapiens
WBGene00022025	Y65B4A.1	75	38.571	ENSAPOG00000009823	htatsf1	76	38.793	Acanthochromis_polyacanthus
WBGene00022025	Y65B4A.1	76	37.360	ENSACIG00000020459	htatsf1	77	38.527	Amphilophus_citrinellus
WBGene00022025	Y65B4A.1	75	38.462	ENSAOCG00000020994	htatsf1	75	39.031	Amphiprion_ocellaris
WBGene00022025	Y65B4A.1	75	38.462	ENSAPEG00000016432	htatsf1	75	39.031	Amphiprion_percula
WBGene00022025	Y65B4A.1	80	36.486	ENSATEG00000008903	htatsf1	78	39.205	Anabas_testudineus
WBGene00022025	Y65B4A.1	75	37.822	ENSAPLG00000012401	HTATSF1	76	37.273	Anas_platyrhynchos
WBGene00022025	Y65B4A.1	75	35.965	ENSACAG00000009346	HTATSF1	83	37.982	Anolis_carolinensis
WBGene00022025	Y65B4A.1	77	37.190	ENSACLG00000008096	htatsf1	78	38.268	Astatotilapia_calliptera
WBGene00022025	Y65B4A.1	71	39.823	ENSAMXG00000008387	htatsf1	70	39.879	Astyanax_mexicanus
WBGene00022025	Y65B4A.1	71	38.558	ENSCPBG00000026092	HTATSF1	75	38.019	Chrysemys_picta_bellii
WBGene00022025	Y65B4A.1	78	34.006	ENSCING00000005914	-	52	37.354	Ciona_intestinalis
WBGene00022025	Y65B4A.1	79	34.746	ENSCSAVG00000000371	-	53	39.024	Ciona_savignyi
WBGene00022025	Y65B4A.1	75	37.822	ENSCVAG00000014070	htatsf1	72	37.879	Cyprinodon_variegatus
WBGene00022025	Y65B4A.1	78	39.167	ENSDARG00000056649	htatsf1	77	38.352	Danio_rerio
WBGene00022025	Y65B4A.1	94	30.723	FBgn0037081	barc	57	38.769	Drosophila_melanogaster
WBGene00022025	Y65B4A.1	77	37.666	ENSEBUG00000001534	htatsf1	72	38.462	Eptatretus_burgeri
WBGene00022025	Y65B4A.1	76	37.822	ENSELUG00000005486	htatsf1	67	39.429	Esox_lucius
WBGene00022025	Y65B4A.1	77	36.975	ENSFALG00000003728	HTATSF1	73	37.463	Ficedula_albicollis
WBGene00022025	Y65B4A.1	76	38.028	ENSFHEG00000020286	htatsf1	79	38.028	Fundulus_heteroclitus
WBGene00022025	Y65B4A.1	70	39.198	ENSGMOG00000016444	htatsf1	88	38.629	Gadus_morhua
WBGene00022025	Y65B4A.1	75	36.782	ENSGALG00000006410	HTATSF1	70	36.170	Gallus_gallus
WBGene00022025	Y65B4A.1	77	37.017	ENSGAFG00000003041	htatsf1	77	38.202	Gambusia_affinis
WBGene00022025	Y65B4A.1	75	42.075	ENSGACG00000020459	htatsf1	77	42.075	Gasterosteus_aculeatus
WBGene00022025	Y65B4A.1	77	36.915	ENSHBUG00000004392	htatsf1	78	37.989	Haplochromis_burtoni
WBGene00022025	Y65B4A.1	75	38.329	ENSHCOG00000009056	htatsf1	79	38.329	Hippocampus_comes
WBGene00022025	Y65B4A.1	75	39.535	ENSIPUG00000017828	htatsf1	67	41.456	Ictalurus_punctatus
WBGene00022025	Y65B4A.1	76	37.853	ENSKMAG00000007622	htatsf1	77	38.418	Kryptolebias_marmoratus
WBGene00022025	Y65B4A.1	76	39.542	ENSLBEG00000001154	htatsf1	76	39.542	Labrus_bergylta
WBGene00022025	Y65B4A.1	76	39.031	ENSLACG00000015989	HTATSF1	76	38.728	Latimeria_chalumnae
WBGene00022025	Y65B4A.1	77	37.047	ENSMAMG00000021225	htatsf1	79	37.640	Mastacembelus_armatus
WBGene00022025	Y65B4A.1	77	37.158	ENSMZEG00005000485	htatsf1	78	38.268	Maylandia_zebra
WBGene00022025	Y65B4A.1	75	36.782	ENSMGAG00000003558	HTATSF1	73	36.170	Meleagris_gallopavo
WBGene00022025	Y65B4A.1	77	37.047	ENSMMOG00000011013	htatsf1	77	38.462	Mola_mola
WBGene00022025	Y65B4A.1	79	37.394	ENSMODG00000014087	-	74	37.353	Monodelphis_domestica
WBGene00022025	Y65B4A.1	75	40.171	ENSMALG00000019977	htatsf1	77	40.456	Monopterus_albus
WBGene00022025	Y65B4A.1	77	37.158	ENSNBRG00000003818	htatsf1	78	38.268	Neolamprologus_brichardi
WBGene00022025	Y65B4A.1	75	40.059	ENSMEUG00000004133	-	78	40.059	Notamacropus_eugenii
WBGene00022025	Y65B4A.1	77	36.612	ENSONIG00000008638	htatsf1	78	37.709	Oreochromis_niloticus
WBGene00022025	Y65B4A.1	75	37.798	ENSOANG00000011674	-	75	37.855	Ornithorhynchus_anatinus
WBGene00022025	Y65B4A.1	75	38.746	ENSORLG00000002356	htatsf1	76	39.601	Oryzias_latipes
WBGene00022025	Y65B4A.1	75	38.746	ENSORLG00020017818	htatsf1	73	38.462	Oryzias_latipes_hni
WBGene00022025	Y65B4A.1	75	38.746	ENSORLG00015002268	htatsf1	76	39.601	Oryzias_latipes_hsok
WBGene00022025	Y65B4A.1	75	39.377	ENSOMEG00000007564	htatsf1	76	39.601	Oryzias_melastigma
WBGene00022025	Y65B4A.1	78	37.778	ENSPKIG00000024852	htatsf1	75	38.757	Paramormyrops_kingsleyae
WBGene00022025	Y65B4A.1	59	38.550	ENSPSIG00000010192	HTATSF1	66	41.277	Pelodiscus_sinensis
WBGene00022025	Y65B4A.1	75	37.430	ENSPMGG00000006172	htatsf1	77	37.709	Periophthalmus_magnuspinnatus
WBGene00022025	Y65B4A.1	78	38.968	ENSPCIG00000030173	-	75	39.403	Phascolarctos_cinereus
WBGene00022025	Y65B4A.1	75	36.119	ENSPCIG00000018896	-	74	36.119	Phascolarctos_cinereus
WBGene00022025	Y65B4A.1	77	37.326	ENSPFOG00000007871	htatsf1	76	38.202	Poecilia_formosa
WBGene00022025	Y65B4A.1	78	38.227	ENSPLAG00000007532	htatsf1	78	38.418	Poecilia_latipinna
WBGene00022025	Y65B4A.1	77	36.712	ENSPMEG00000000352	htatsf1	79	37.640	Poecilia_mexicana
WBGene00022025	Y65B4A.1	77	38.997	ENSPREG00000007811	htatsf1	79	39.326	Poecilia_reticulata
WBGene00022025	Y65B4A.1	77	37.158	ENSPNYG00000016693	htatsf1	78	38.268	Pundamilia_nyererei
WBGene00022025	Y65B4A.1	71	40.256	ENSPNAG00000006166	htatsf1	72	40.176	Pygocentrus_nattereri
WBGene00022025	Y65B4A.1	79	38.781	ENSSHAG00000018908	-	73	39.701	Sarcophilus_harrisii
WBGene00022025	Y65B4A.1	78	38.873	ENSSHAG00000006440	-	85	39.583	Sarcophilus_harrisii
WBGene00022025	Y65B4A.1	75	38.953	ENSSFOG00015012002	htatsf1	72	39.535	Scleropages_formosus
WBGene00022025	Y65B4A.1	75	37.883	ENSSMAG00000002970	htatsf1	70	37.941	Scophthalmus_maximus
WBGene00022025	Y65B4A.1	72	40.000	ENSSDUG00000020002	htatsf1	77	40.303	Seriola_dumerili
WBGene00022025	Y65B4A.1	75	39.316	ENSSLDG00000016880	htatsf1	77	40.171	Seriola_lalandi_dorsalis
WBGene00022025	Y65B4A.1	75	36.182	ENSSPUG00000014767	HTATSF1	73	36.752	Sphenodon_punctatus
WBGene00022025	Y65B4A.1	75	38.571	ENSSPAG00000000732	htatsf1	75	39.429	Stegastes_partitus
WBGene00022025	Y65B4A.1	77	36.857	ENSTGUG00000002099	HTATSF1	74	36.888	Taeniopygia_guttata
WBGene00022025	Y65B4A.1	76	36.111	ENSTRUG00000013383	htatsf1	79	36.648	Takifugu_rubripes
WBGene00022025	Y65B4A.1	76	37.500	ENSTNIG00000016140	htatsf1	78	38.068	Tetraodon_nigroviridis
WBGene00022025	Y65B4A.1	72	36.449	ENSTTRG00000002269	HTATSF1	53	36.449	Tursiops_truncatus
WBGene00022025	Y65B4A.1	84	36.735	ENSXETG00000019749	htatsf1	65	37.536	Xenopus_tropicalis
WBGene00022025	Y65B4A.1	77	39.535	ENSXCOG00000006912	htatsf1	79	40.469	Xiphophorus_couchianus
WBGene00022025	Y65B4A.1	77	39.155	ENSXMAG00000000490	htatsf1	78	40.173	Xiphophorus_maculatus