EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00022046 (Gene tree)
Gene ID: -
Gene Symbol: Y66H1A.4
Alias: -
Full Name: Probable H/ACA ribonucleoprotein complex subunit 1-like protein
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Plus strand
Length: 1233 bases
Position: chrIV:425972-427204
Accession: Q9TYK1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y66H1A	Gar1	PF04410.14	7.1e-29	1	1
Y66H1A	Gar1	PF04410.14	7.1e-29	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y66H1A.4.2	-	989	NM_067526	Y66H1A.4.2	244 (aa)	NP_499927	Q9TYK1
Y66H1A.4.1	-	1185	-	Y66H1A.4.1	244 (aa)	-	Q9TYK1

Gene Model

Click here to download WBGene00022046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00022046's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00022046	Y66H1A.4	54	52.632	ENSAPOG00000019754	gar1	53	57.143	Acanthochromis_polyacanthus
WBGene00022046	Y66H1A.4	64	50.000	ENSANAG00000021608	GAR1	64	54.286	Aotus_nancymaae
WBGene00022046	Y66H1A.4	64	50.000	ENSCJAG00000004041	GAR1	64	54.286	Callithrix_jacchus
WBGene00022046	Y66H1A.4	55	48.529	ENSTSYG00000026632	-	50	54.082	Carlito_syrichta
WBGene00022046	Y66H1A.4	64	50.000	ENSCCAG00000029372	GAR1	64	54.286	Cebus_capucinus
WBGene00022046	Y66H1A.4	59	51.754	ENSCSAVG00000006355	-	63	53.636	Ciona_savignyi
WBGene00022046	Y66H1A.4	54	54.478	ENSHGLG00000000493	GAR1	62	57.447	Heterocephalus_glaber_female
WBGene00022046	Y66H1A.4	69	52.941	ENSLACG00000003306	GAR1	60	58.586	Latimeria_chalumnae
WBGene00022046	Y66H1A.4	61	40.667	ENSMFAG00000003572	-	64	50.617	Macaca_fascicularis
WBGene00022046	Y66H1A.4	61	40.667	ENSMMUG00000038929	-	64	50.617	Macaca_mulatta
WBGene00022046	Y66H1A.4	58	56.250	ENSMAUG00000016788	Gar1	59	57.447	Mesocricetus_auratus
WBGene00022046	Y66H1A.4	58	56.944	MGP_CAROLIEiJ_G0025627	Gar1	59	57.447	Mus_caroli
WBGene00022046	Y66H1A.4	58	56.944	ENSMUSG00000028010	Gar1	59	57.447	Mus_musculus
WBGene00022046	Y66H1A.4	58	56.250	MGP_PahariEiJ_G0027076	Gar1	59	57.447	Mus_pahari
WBGene00022046	Y66H1A.4	58	56.944	MGP_SPRETEiJ_G0026580	Gar1	59	57.447	Mus_spretus
WBGene00022046	Y66H1A.4	64	49.367	ENSOCUG00000003901	GAR1	65	53.571	Oryctolagus_cuniculus
WBGene00022046	Y66H1A.4	58	56.250	ENSPEMG00000015838	Gar1	59	57.447	Peromyscus_maniculatus_bairdii
WBGene00022046	Y66H1A.4	50	57.724	ENSRNOG00000061146	Gar1	57	61.224	Rattus_norvegicus
WBGene00022046	Y66H1A.4	61	56.250	ENSSPUG00000008707	GAR1	55	60.606	Sphenodon_punctatus
WBGene00022046	Y66H1A.4	57	54.930	ENSXMAG00000002316	GAR1	60	54.930	Xiphophorus_maculatus