EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00022253 (Gene tree)
Gene ID: -
Gene Symbol: hrpf-2
Alias: -
Full Name: HnRNP F homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 3362 bases
Position: chrIV:6373162-6376523
Accession: V6CLR1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y73B6BL	RRM_1	PF00076.22	4.1e-30	1	3
Y73B6BL	RRM_1	PF00076.22	4.1e-30	2	3
Y73B6BL	RRM_1	PF00076.22	4.1e-30	3	3
Y73B6BL	RRM_1	PF00076.22	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y73B6BL.33b	-	1965	-	Y73B6BL.33b	348 (aa)	NP_001293781	V6CLR1
Y73B6BL.33a	-	2269	NM_171360	Y73B6BL.33a	610 (aa)	NP_741422	Q8MXR2

Gene Model

Click here to download WBGene00022253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00022253's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00022253	hrpf-2	56	38.158	WBGene00020936	hrpf-1	55	38.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00022253	hrpf-2	53	34.109	FBgn0259139	glo	85	37.008	Drosophila_melanogaster