EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00022400 (Gene tree)
Gene ID: -
Gene Symbol: rpb-9
Alias: -
Full Name: DNA-directed RNA polymerase subunit
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 1127 bases
Position: chrV:8011219-8012345
Accession: Q965S0
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y97E10AR	RNA_POL_M_15KD	PF02150.16	1.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y97E10AR.5	-	641	NM_072661	Y97E10AR.5	167 (aa)	NP_505062	Q965S0

Gene Model

Click here to download WBGene00022400's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00022400's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00022400	rpb-9	74	62.097	ENSG00000105258	POLR2I	97	64.706	Homo_sapiens
WBGene00022400	rpb-9	72	64.463	ENSAPOG00000012409	polr2i	96	64.463	Acanthochromis_polyacanthus
WBGene00022400	rpb-9	74	62.097	ENSAMEG00000000993	POLR2I	99	62.097	Ailuropoda_melanoleuca
WBGene00022400	rpb-9	72	64.463	ENSAOCG00000024378	polr2i	96	64.463	Amphiprion_ocellaris
WBGene00022400	rpb-9	72	64.463	ENSAPEG00000021748	polr2i	96	64.463	Amphiprion_percula
WBGene00022400	rpb-9	72	65.289	ENSATEG00000000758	polr2i	96	65.289	Anabas_testudineus
WBGene00022400	rpb-9	74	62.097	ENSANAG00000035318	POLR2I	99	62.097	Aotus_nancymaae
WBGene00022400	rpb-9	74	63.710	ENSACLG00000001663	polr2i	98	63.710	Astatotilapia_calliptera
WBGene00022400	rpb-9	72	64.463	ENSAMXG00000030198	polr2i	96	64.463	Astyanax_mexicanus
WBGene00022400	rpb-9	74	62.097	ENSBTAG00000015002	POLR2I	99	62.097	Bos_taurus
WBGene00022400	rpb-9	74	62.097	ENSCJAG00000009671	POLR2I	99	62.097	Callithrix_jacchus
WBGene00022400	rpb-9	74	62.097	ENSCAFG00000006601	POLR2I	99	62.097	Canis_familiaris
WBGene00022400	rpb-9	74	62.097	ENSCAFG00020018113	POLR2I	99	62.097	Canis_lupus_dingo
WBGene00022400	rpb-9	74	62.097	ENSCHIG00000011961	POLR2I	99	62.097	Capra_hircus
WBGene00022400	rpb-9	62	41.748	ENSTSYG00000031752	-	95	41.748	Carlito_syrichta
WBGene00022400	rpb-9	74	62.097	ENSTSYG00000028318	-	100	61.165	Carlito_syrichta
WBGene00022400	rpb-9	74	62.097	ENSCPOG00000012097	POLR2I	99	62.097	Cavia_porcellus
WBGene00022400	rpb-9	74	62.097	ENSCCAG00000022138	-	99	62.097	Cebus_capucinus
WBGene00022400	rpb-9	74	61.290	ENSCCAG00000032214	-	99	61.290	Cebus_capucinus
WBGene00022400	rpb-9	74	62.097	ENSCATG00000017413	POLR2I	99	62.097	Cercocebus_atys
WBGene00022400	rpb-9	74	62.097	ENSCLAG00000011800	POLR2I	99	62.097	Chinchilla_lanigera
WBGene00022400	rpb-9	74	62.097	ENSCSAG00000004254	POLR2I	99	62.097	Chlorocebus_sabaeus
WBGene00022400	rpb-9	74	62.097	ENSCPBG00000006726	POLR2I	99	62.097	Chrysemys_picta_bellii
WBGene00022400	rpb-9	70	62.393	ENSCSAVG00000010630	-	93	62.393	Ciona_savignyi
WBGene00022400	rpb-9	62	61.538	ENSCANG00000031951	POLR2I	99	61.538	Colobus_angolensis_palliatus
WBGene00022400	rpb-9	72	66.116	ENSCSEG00000002213	polr2i	96	66.116	Cynoglossus_semilaevis
WBGene00022400	rpb-9	72	63.636	ENSCVAG00000014797	polr2i	96	63.636	Cyprinodon_variegatus
WBGene00022400	rpb-9	72	64.463	ENSDARG00000040443	polr2i	96	64.463	Danio_rerio
WBGene00022400	rpb-9	74	62.097	ENSDNOG00000015842	POLR2I	99	62.097	Dasypus_novemcinctus
WBGene00022400	rpb-9	59	47.475	ENSDORG00000028026	-	99	47.475	Dipodomys_ordii
WBGene00022400	rpb-9	65	50.926	ENSDORG00000029259	-	90	50.926	Dipodomys_ordii
WBGene00022400	rpb-9	64	51.402	ENSDORG00000028728	-	91	51.402	Dipodomys_ordii
WBGene00022400	rpb-9	74	62.097	ENSDORG00000001852	-	99	62.097	Dipodomys_ordii
WBGene00022400	rpb-9	71	69.492	FBgn0004855	RpII15	91	69.492	Drosophila_melanogaster
WBGene00022400	rpb-9	74	62.097	ENSETEG00000012679	POLR2I	99	62.097	Echinops_telfairi
WBGene00022400	rpb-9	71	63.559	ENSEBUG00000007333	polr2i	100	59.223	Eptatretus_burgeri
WBGene00022400	rpb-9	74	62.097	ENSEASG00005002231	POLR2I	99	62.097	Equus_asinus_asinus
WBGene00022400	rpb-9	74	62.097	ENSECAG00000013654	POLR2I	99	62.097	Equus_caballus
WBGene00022400	rpb-9	74	62.097	ENSEEUG00000002113	POLR2I	99	62.097	Erinaceus_europaeus
WBGene00022400	rpb-9	72	64.463	ENSELUG00000018012	polr2i	96	64.463	Esox_lucius
WBGene00022400	rpb-9	74	62.097	ENSFCAG00000026052	POLR2I	99	62.097	Felis_catus
WBGene00022400	rpb-9	74	62.097	ENSFDAG00000011350	POLR2I	99	62.097	Fukomys_damarensis
WBGene00022400	rpb-9	72	63.636	ENSFHEG00000015659	polr2i	96	63.636	Fundulus_heteroclitus
WBGene00022400	rpb-9	72	64.463	ENSGMOG00000013806	polr2i	96	64.463	Gadus_morhua
WBGene00022400	rpb-9	74	63.710	ENSGALG00000038595	POLR2I	95	63.710	Gallus_gallus
WBGene00022400	rpb-9	72	64.463	ENSGAFG00000001037	polr2i	96	64.463	Gambusia_affinis
WBGene00022400	rpb-9	74	64.228	ENSGACG00000006679	polr2i	98	64.228	Gasterosteus_aculeatus
WBGene00022400	rpb-9	74	62.097	ENSGAGG00000015806	POLR2I	99	62.097	Gopherus_agassizii
WBGene00022400	rpb-9	74	62.097	ENSGGOG00000015426	POLR2I	99	62.097	Gorilla_gorilla
WBGene00022400	rpb-9	72	64.463	ENSHBUG00000004140	polr2i	96	64.463	Haplochromis_burtoni
WBGene00022400	rpb-9	62	61.165	ENSHGLG00000007388	POLR2I	100	61.165	Heterocephalus_glaber_female
WBGene00022400	rpb-9	62	61.165	ENSHGLG00100014515	POLR2I	100	61.165	Heterocephalus_glaber_male
WBGene00022400	rpb-9	72	64.463	ENSHCOG00000010967	polr2i	96	64.463	Hippocampus_comes
WBGene00022400	rpb-9	72	64.463	ENSIPUG00000001127	polr2i	96	64.463	Ictalurus_punctatus
WBGene00022400	rpb-9	74	62.097	ENSSTOG00000009411	POLR2I	99	62.097	Ictidomys_tridecemlineatus
WBGene00022400	rpb-9	74	62.097	ENSJJAG00000014400	Polr2i	99	62.097	Jaculus_jaculus
WBGene00022400	rpb-9	72	64.463	ENSKMAG00000001567	polr2i	96	64.463	Kryptolebias_marmoratus
WBGene00022400	rpb-9	50	66.265	ENSLBEG00000028538	-	93	66.265	Labrus_bergylta
WBGene00022400	rpb-9	72	64.463	ENSLBEG00000001220	polr2i	96	64.463	Labrus_bergylta
WBGene00022400	rpb-9	71	65.254	ENSLACG00000009590	POLR2I	94	65.254	Latimeria_chalumnae
WBGene00022400	rpb-9	72	64.463	ENSLOCG00000014818	polr2i	96	64.463	Lepisosteus_oculatus
WBGene00022400	rpb-9	74	62.097	ENSLAFG00000015527	POLR2I	99	62.097	Loxodonta_africana
WBGene00022400	rpb-9	74	62.097	ENSMFAG00000039443	POLR2I	99	62.097	Macaca_fascicularis
WBGene00022400	rpb-9	62	61.165	ENSMMUG00000000522	POLR2I	100	61.165	Macaca_mulatta
WBGene00022400	rpb-9	74	62.097	ENSMNEG00000029421	POLR2I	99	62.097	Macaca_nemestrina
WBGene00022400	rpb-9	74	62.097	ENSMLEG00000039720	POLR2I	99	62.097	Mandrillus_leucophaeus
WBGene00022400	rpb-9	72	65.289	ENSMAMG00000013970	polr2i	96	65.289	Mastacembelus_armatus
WBGene00022400	rpb-9	72	64.463	ENSMZEG00005013082	polr2i	96	64.463	Maylandia_zebra
WBGene00022400	rpb-9	74	63.710	ENSMGAG00000008576	POLR2I	99	63.710	Meleagris_gallopavo
WBGene00022400	rpb-9	74	62.097	ENSMAUG00000001001	Polr2i	99	62.097	Mesocricetus_auratus
WBGene00022400	rpb-9	74	62.097	ENSMICG00000010241	POLR2I	99	62.097	Microcebus_murinus
WBGene00022400	rpb-9	74	62.097	ENSMOCG00000011984	Polr2i	99	62.097	Microtus_ochrogaster
WBGene00022400	rpb-9	62	63.107	ENSMMOG00000004945	polr2i	100	63.107	Mola_mola
WBGene00022400	rpb-9	74	62.097	ENSMODG00000014172	POLR2I	99	62.097	Monodelphis_domestica
WBGene00022400	rpb-9	74	62.097	MGP_CAROLIEiJ_G0029507	Polr2i	100	61.165	Mus_caroli
WBGene00022400	rpb-9	74	62.097	ENSMUSG00000019738	Polr2i	100	61.165	Mus_musculus
WBGene00022400	rpb-9	74	62.097	MGP_PahariEiJ_G0012741	Polr2i	100	61.165	Mus_pahari
WBGene00022400	rpb-9	74	62.097	MGP_SPRETEiJ_G0030603	Polr2i	100	61.165	Mus_spretus
WBGene00022400	rpb-9	74	62.097	ENSMPUG00000005702	POLR2I	99	62.097	Mustela_putorius_furo
WBGene00022400	rpb-9	74	62.097	ENSMLUG00000012317	POLR2I	99	62.097	Myotis_lucifugus
WBGene00022400	rpb-9	74	62.097	ENSNGAG00000014966	Polr2i	99	62.097	Nannospalax_galili
WBGene00022400	rpb-9	72	64.463	ENSNBRG00000000723	polr2i	96	64.463	Neolamprologus_brichardi
WBGene00022400	rpb-9	74	62.097	ENSNLEG00000011691	POLR2I	99	62.097	Nomascus_leucogenys
WBGene00022400	rpb-9	74	62.097	ENSOPRG00000001789	-	99	62.097	Ochotona_princeps
WBGene00022400	rpb-9	74	61.290	ENSOPRG00000008681	-	99	61.290	Ochotona_princeps
WBGene00022400	rpb-9	74	62.097	ENSODEG00000015015	-	99	62.097	Octodon_degus
WBGene00022400	rpb-9	69	52.586	ENSODEG00000017901	-	88	52.586	Octodon_degus
WBGene00022400	rpb-9	72	64.463	ENSONIG00000005397	polr2i	96	64.463	Oreochromis_niloticus
WBGene00022400	rpb-9	74	62.097	ENSOCUG00000013044	POLR2I	99	62.097	Oryctolagus_cuniculus
WBGene00022400	rpb-9	74	62.097	ENSOCUG00000024998	-	99	62.097	Oryctolagus_cuniculus
WBGene00022400	rpb-9	72	64.463	ENSORLG00000013308	polr2i	96	64.463	Oryzias_latipes
WBGene00022400	rpb-9	72	64.463	ENSORLG00020011281	polr2i	96	64.463	Oryzias_latipes_hni
WBGene00022400	rpb-9	72	64.463	ENSORLG00015019529	polr2i	96	64.463	Oryzias_latipes_hsok
WBGene00022400	rpb-9	72	64.463	ENSOMEG00000012586	polr2i	96	64.463	Oryzias_melastigma
WBGene00022400	rpb-9	74	62.097	ENSOGAG00000024254	POLR2I	99	62.097	Otolemur_garnettii
WBGene00022400	rpb-9	74	62.097	ENSOARG00000005266	POLR2I	99	62.097	Ovis_aries
WBGene00022400	rpb-9	74	62.097	ENSPPAG00000033446	POLR2I	99	62.097	Pan_paniscus
WBGene00022400	rpb-9	74	62.097	ENSPPRG00000007194	POLR2I	99	62.097	Panthera_pardus
WBGene00022400	rpb-9	74	62.097	ENSPTIG00000018661	POLR2I	99	62.097	Panthera_tigris_altaica
WBGene00022400	rpb-9	74	62.097	ENSPTRG00000010885	POLR2I	99	62.097	Pan_troglodytes
WBGene00022400	rpb-9	74	62.097	ENSPANG00000004508	POLR2I	99	62.097	Papio_anubis
WBGene00022400	rpb-9	72	64.463	ENSPKIG00000001086	polr2i	96	64.463	Paramormyrops_kingsleyae
WBGene00022400	rpb-9	62	61.165	ENSPSIG00000011560	POLR2I	100	61.165	Pelodiscus_sinensis
WBGene00022400	rpb-9	72	60.800	ENSPMGG00000016154	polr2i	96	60.800	Periophthalmus_magnuspinnatus
WBGene00022400	rpb-9	74	62.097	ENSPEMG00000014212	Polr2i	99	62.097	Peromyscus_maniculatus_bairdii
WBGene00022400	rpb-9	74	62.097	ENSPCIG00000015436	-	99	62.097	Phascolarctos_cinereus
WBGene00022400	rpb-9	72	64.463	ENSPFOG00000016816	polr2i	96	64.463	Poecilia_formosa
WBGene00022400	rpb-9	72	64.463	ENSPLAG00000010639	polr2i	96	64.463	Poecilia_latipinna
WBGene00022400	rpb-9	72	64.463	ENSPMEG00000005956	polr2i	96	64.463	Poecilia_mexicana
WBGene00022400	rpb-9	72	64.463	ENSPREG00000004227	polr2i	96	64.463	Poecilia_reticulata
WBGene00022400	rpb-9	74	62.097	ENSPPYG00000009897	POLR2I	99	62.097	Pongo_abelii
WBGene00022400	rpb-9	74	62.097	ENSPCAG00000003494	POLR2I	99	62.097	Procavia_capensis
WBGene00022400	rpb-9	74	62.097	ENSPCOG00000018643	POLR2I	99	62.097	Propithecus_coquereli
WBGene00022400	rpb-9	74	62.097	ENSPVAG00000012883	POLR2I	99	62.097	Pteropus_vampyrus
WBGene00022400	rpb-9	72	64.463	ENSPNYG00000011908	polr2i	96	64.463	Pundamilia_nyererei
WBGene00022400	rpb-9	72	64.463	ENSPNAG00000005859	polr2i	96	64.463	Pygocentrus_nattereri
WBGene00022400	rpb-9	74	62.097	ENSRNOG00000050560	Polr2i	99	62.097	Rattus_norvegicus
WBGene00022400	rpb-9	74	62.097	ENSRNOG00000020799	LOC103690054	99	62.097	Rattus_norvegicus
WBGene00022400	rpb-9	74	62.097	ENSRBIG00000037225	POLR2I	99	62.097	Rhinopithecus_bieti
WBGene00022400	rpb-9	74	62.097	ENSRROG00000042843	POLR2I	99	62.097	Rhinopithecus_roxellana
WBGene00022400	rpb-9	66	44.144	YGL070C	RPB9	89	44.144	Saccharomyces_cerevisiae
WBGene00022400	rpb-9	74	62.097	ENSSBOG00000030799	-	99	62.097	Saimiri_boliviensis_boliviensis
WBGene00022400	rpb-9	69	49.138	ENSSBOG00000022998	-	68	49.138	Saimiri_boliviensis_boliviensis
WBGene00022400	rpb-9	72	64.463	ENSSFOG00015022523	polr2i	96	64.463	Scleropages_formosus
WBGene00022400	rpb-9	72	65.289	ENSSMAG00000003335	polr2i	96	65.289	Scophthalmus_maximus
WBGene00022400	rpb-9	72	65.289	ENSSDUG00000005483	polr2i	96	65.289	Seriola_dumerili
WBGene00022400	rpb-9	72	65.289	ENSSLDG00000009341	polr2i	96	65.289	Seriola_lalandi_dorsalis
WBGene00022400	rpb-9	74	62.097	ENSSARG00000009331	POLR2I	99	62.097	Sorex_araneus
WBGene00022400	rpb-9	74	61.290	ENSSPUG00000012658	POLR2I	99	61.290	Sphenodon_punctatus
WBGene00022400	rpb-9	72	64.463	ENSSPAG00000015734	polr2i	96	64.463	Stegastes_partitus
WBGene00022400	rpb-9	74	62.097	ENSSSCG00000039196	POLR2I	99	62.097	Sus_scrofa
WBGene00022400	rpb-9	72	64.463	ENSTRUG00000022235	polr2i	96	64.463	Takifugu_rubripes
WBGene00022400	rpb-9	72	64.463	ENSTNIG00000011737	polr2i	96	64.463	Tetraodon_nigroviridis
WBGene00022400	rpb-9	74	62.097	ENSTTRG00000003919	POLR2I	99	62.097	Tursiops_truncatus
WBGene00022400	rpb-9	74	62.097	ENSUAMG00000020575	POLR2I	99	62.097	Ursus_americanus
WBGene00022400	rpb-9	74	62.097	ENSUMAG00000020809	POLR2I	99	62.097	Ursus_maritimus
WBGene00022400	rpb-9	74	62.097	ENSVVUG00000013588	POLR2I	99	62.097	Vulpes_vulpes
WBGene00022400	rpb-9	72	64.463	ENSXCOG00000001119	polr2i	96	64.463	Xiphophorus_couchianus
WBGene00022400	rpb-9	72	64.463	ENSXMAG00000021278	polr2i	96	64.463	Xiphophorus_maculatus