EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00022489 (Gene tree)
Gene ID: -
Gene Symbol: Y119D3B.12
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Plus strand
Length: 4799 bases
Position: chrIII:1202548-1207346
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y119D3B	LUC7	PF03194.15	2e-74	1	1
Y119D3B	LUC7	PF03194.15	2e-74	1	1
Y119D3B	LUC7	PF03194.15	2e-74	1	1
Y119D3B	LUC7	PF03194.15	2.9e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y119D3B.12a.1	-	1185	NM_064947	Y119D3B.12a.1	339 (aa)	NP_497348	H2L0S8
Y119D3B.12a.2	-	1282	NM_064947	Y119D3B.12a.2	339 (aa)	NP_497348	H2L0S8
Y119D3B.12a.3	-	1508	-	Y119D3B.12a.3	339 (aa)	-	H2L0S8
Y119D3B.12b	-	781	NM_181939	Y119D3B.12b	224 (aa)	NP_871668	Q8IAB4

Gene Model

Click here to download WBGene00022489's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00022489's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00022489	Y119D3B.12	89	33.171	WBGene00016811	C50D2.8	81	34.457

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00022489	Y119D3B.12	80	35.165	ENSG00000108848	LUC7L3	65	47.059	Homo_sapiens
WBGene00022489	Y119D3B.12	80	34.254	ENSAPOG00000018456	luc7l3	84	30.481	Acanthochromis_polyacanthus
WBGene00022489	Y119D3B.12	80	35.165	ENSAMEG00000007790	LUC7L3	70	31.348	Ailuropoda_melanoleuca
WBGene00022489	Y119D3B.12	80	34.807	ENSACIG00000000544	luc7l3	92	36.214	Amphilophus_citrinellus
WBGene00022489	Y119D3B.12	80	34.254	ENSAOCG00000002667	-	87	30.481	Amphiprion_ocellaris
WBGene00022489	Y119D3B.12	80	34.254	ENSAPEG00000008154	luc7l3	87	30.481	Amphiprion_percula
WBGene00022489	Y119D3B.12	68	33.333	ENSAPLG00000015263	LUC7L3	67	32.830	Anas_platyrhynchos
WBGene00022489	Y119D3B.12	80	34.254	ENSACAG00000001586	LUC7L3	63	32.131	Anolis_carolinensis
WBGene00022489	Y119D3B.12	80	35.165	ENSANAG00000030274	LUC7L3	65	47.059	Aotus_nancymaae
WBGene00022489	Y119D3B.12	80	30.726	ENSAMXG00000042216	zgc:158803	51	30.726	Astyanax_mexicanus
WBGene00022489	Y119D3B.12	80	34.807	ENSAMXG00000020856	luc7l3	56	35.270	Astyanax_mexicanus
WBGene00022489	Y119D3B.12	80	35.165	ENSBTAG00000002279	LUC7L3	70	31.348	Bos_taurus
WBGene00022489	Y119D3B.12	80	35.165	ENSCJAG00000018558	LUC7L3	96	36.170	Callithrix_jacchus
WBGene00022489	Y119D3B.12	80	35.165	ENSCAFG00000017220	LUC7L3	70	31.348	Canis_familiaris
WBGene00022489	Y119D3B.12	80	35.165	ENSCAFG00020024223	LUC7L3	64	31.348	Canis_lupus_dingo
WBGene00022489	Y119D3B.12	80	35.165	ENSCHIG00000012671	LUC7L3	62	31.034	Capra_hircus
WBGene00022489	Y119D3B.12	80	35.165	ENSCCAG00000033579	LUC7L3	65	47.059	Cebus_capucinus
WBGene00022489	Y119D3B.12	80	35.165	ENSCATG00000034891	LUC7L3	65	47.059	Cercocebus_atys
WBGene00022489	Y119D3B.12	80	35.165	ENSCLAG00000013901	LUC7L3	70	31.348	Chinchilla_lanigera
WBGene00022489	Y119D3B.12	80	35.165	ENSCSAG00000005485	LUC7L3	64	31.348	Chlorocebus_sabaeus
WBGene00022489	Y119D3B.12	80	35.165	ENSCHOG00000008575	LUC7L3	70	31.348	Choloepus_hoffmanni
WBGene00022489	Y119D3B.12	80	34.426	ENSCPBG00000028202	LUC7L3	65	30.818	Chrysemys_picta_bellii
WBGene00022489	Y119D3B.12	77	33.149	ENSCING00000003836	-	60	34.507	Ciona_intestinalis
WBGene00022489	Y119D3B.12	78	31.203	ENSCSAVG00000004990	-	97	31.203	Ciona_savignyi
WBGene00022489	Y119D3B.12	80	35.165	ENSCANG00000028098	LUC7L3	91	36.638	Colobus_angolensis_palliatus
WBGene00022489	Y119D3B.12	80	35.165	ENSCGRG00001009809	Luc7l3	68	30.539	Cricetulus_griseus_chok1gshd
WBGene00022489	Y119D3B.12	75	33.333	ENSCGRG00000002461	Luc7l3	70	30.519	Cricetulus_griseus_crigri
WBGene00022489	Y119D3B.12	73	34.008	ENSCSEG00000013074	luc7l3	98	34.008	Cynoglossus_semilaevis
WBGene00022489	Y119D3B.12	86	30.729	FBgn0036734	CG7564	60	31.273	Drosophila_melanogaster
WBGene00022489	Y119D3B.12	65	33.182	ENSEBUG00000000982	luc7l3	55	32.487	Eptatretus_burgeri
WBGene00022489	Y119D3B.12	80	35.165	ENSEASG00005016944	LUC7L3	65	31.348	Equus_asinus_asinus
WBGene00022489	Y119D3B.12	80	35.165	ENSECAG00000012760	LUC7L3	69	31.034	Equus_caballus
WBGene00022489	Y119D3B.12	80	31.319	ENSEEUG00000004761	LUC7L3	52	33.058	Erinaceus_europaeus
WBGene00022489	Y119D3B.12	74	30.120	ENSELUG00000009242	luc7l	52	30.120	Esox_lucius
WBGene00022489	Y119D3B.12	80	34.254	ENSELUG00000004700	luc7l3	52	34.981	Esox_lucius
WBGene00022489	Y119D3B.12	80	35.165	ENSFCAG00000012343	LUC7L3	68	47.170	Felis_catus
WBGene00022489	Y119D3B.12	80	34.807	ENSFALG00000001397	LUC7L3	65	30.818	Ficedula_albicollis
WBGene00022489	Y119D3B.12	68	33.333	ENSFDAG00000013781	LUC7L3	62	30.000	Fukomys_damarensis
WBGene00022489	Y119D3B.12	80	33.149	ENSGMOG00000003179	luc7l3	53	34.025	Gadus_morhua
WBGene00022489	Y119D3B.12	80	35.165	ENSGALG00000007386	LUC7L3	70	31.348	Gallus_gallus
WBGene00022489	Y119D3B.12	80	34.807	ENSGACG00000012598	luc7l3	52	36.929	Gasterosteus_aculeatus
WBGene00022489	Y119D3B.12	80	34.254	ENSGAGG00000007181	LUC7L3	65	30.818	Gopherus_agassizii
WBGene00022489	Y119D3B.12	80	35.165	ENSGGOG00000024399	LUC7L3	65	47.059	Gorilla_gorilla
WBGene00022489	Y119D3B.12	80	35.165	ENSHGLG00000010417	LUC7L3	64	31.348	Heterocephalus_glaber_female
WBGene00022489	Y119D3B.12	80	35.165	ENSHGLG00100014179	LUC7L3	70	31.348	Heterocephalus_glaber_male
WBGene00022489	Y119D3B.12	71	30.625	ENSHCOG00000016391	zgc:158803	55	30.625	Hippocampus_comes
WBGene00022489	Y119D3B.12	80	35.165	ENSSTOG00000004234	LUC7L3	70	31.348	Ictidomys_tridecemlineatus
WBGene00022489	Y119D3B.12	80	32.044	ENSJJAG00000021606	-	73	30.263	Jaculus_jaculus
WBGene00022489	Y119D3B.12	80	35.165	ENSJJAG00000011218	-	70	31.348	Jaculus_jaculus
WBGene00022489	Y119D3B.12	80	34.807	ENSKMAG00000000587	luc7l3	64	30.841	Kryptolebias_marmoratus
WBGene00022489	Y119D3B.12	80	34.807	ENSLBEG00000004857	luc7l3	55	33.813	Labrus_bergylta
WBGene00022489	Y119D3B.12	80	36.612	ENSLACG00000006164	LUC7L3	61	36.626	Latimeria_chalumnae
WBGene00022489	Y119D3B.12	80	35.359	ENSLOCG00000010953	luc7l3	67	32.188	Lepisosteus_oculatus
WBGene00022489	Y119D3B.12	80	35.165	ENSLAFG00000007054	LUC7L3	68	34.021	Loxodonta_africana
WBGene00022489	Y119D3B.12	80	35.165	ENSMFAG00000031780	LUC7L3	65	47.059	Macaca_fascicularis
WBGene00022489	Y119D3B.12	80	35.165	ENSMMUG00000010117	LUC7L3	65	47.059	Macaca_mulatta
WBGene00022489	Y119D3B.12	80	35.165	ENSMNEG00000005520	LUC7L3	65	47.059	Macaca_nemestrina
WBGene00022489	Y119D3B.12	80	35.165	ENSMLEG00000034172	LUC7L3	65	47.059	Mandrillus_leucophaeus
WBGene00022489	Y119D3B.12	80	34.807	ENSMAMG00000023698	luc7l3	52	36.929	Mastacembelus_armatus
WBGene00022489	Y119D3B.12	79	31.073	ENSMAMG00000003914	zgc:158803	53	31.073	Mastacembelus_armatus
WBGene00022489	Y119D3B.12	68	33.333	ENSMGAG00000008655	LUC7L3	69	30.000	Meleagris_gallopavo
WBGene00022489	Y119D3B.12	80	35.165	ENSMAUG00000016610	Luc7l3	70	31.348	Mesocricetus_auratus
WBGene00022489	Y119D3B.12	80	35.165	ENSMICG00000009835	-	93	36.626	Microcebus_murinus
WBGene00022489	Y119D3B.12	71	31.535	ENSMICG00000027443	-	91	31.739	Microcebus_murinus
WBGene00022489	Y119D3B.12	80	35.165	ENSMOCG00000013538	Luc7l3	70	31.348	Microtus_ochrogaster
WBGene00022489	Y119D3B.12	80	35.165	ENSMODG00000012711	LUC7L3	70	31.034	Monodelphis_domestica
WBGene00022489	Y119D3B.12	80	35.165	MGP_CAROLIEiJ_G0016977	Luc7l3	70	31.348	Mus_caroli
WBGene00022489	Y119D3B.12	80	35.165	ENSMUSG00000020863	Luc7l3	70	31.348	Mus_musculus
WBGene00022489	Y119D3B.12	80	35.165	MGP_PahariEiJ_G0018108	Luc7l3	70	31.348	Mus_pahari
WBGene00022489	Y119D3B.12	80	35.165	MGP_SPRETEiJ_G0017823	Luc7l3	70	31.348	Mus_spretus
WBGene00022489	Y119D3B.12	71	34.413	ENSMPUG00000015532	LUC7L3	64	30.247	Mustela_putorius_furo
WBGene00022489	Y119D3B.12	80	35.165	ENSNGAG00000007648	Luc7l3	70	31.348	Nannospalax_galili
WBGene00022489	Y119D3B.12	80	34.254	ENSNBRG00000006654	luc7l3	50	36.515	Neolamprologus_brichardi
WBGene00022489	Y119D3B.12	80	30.168	ENSNBRG00000018476	zgc:158803	52	30.168	Neolamprologus_brichardi
WBGene00022489	Y119D3B.12	80	35.714	ENSOPRG00000013537	LUC7L3	53	36.777	Ochotona_princeps
WBGene00022489	Y119D3B.12	80	35.714	ENSOCUG00000002765	LUC7L3	70	31.975	Oryctolagus_cuniculus
WBGene00022489	Y119D3B.12	80	35.359	ENSORLG00000010648	luc7l3	64	32.268	Oryzias_latipes
WBGene00022489	Y119D3B.12	80	35.359	ENSORLG00015004892	luc7l3	64	32.268	Oryzias_latipes_hsok
WBGene00022489	Y119D3B.12	60	42.697	ENSOMEG00000015396	luc7l3	59	45.783	Oryzias_melastigma
WBGene00022489	Y119D3B.12	80	35.165	ENSOGAG00000004535	LUC7L3	70	31.348	Otolemur_garnettii
WBGene00022489	Y119D3B.12	80	35.165	ENSOARG00000003331	LUC7L3	62	31.034	Ovis_aries
WBGene00022489	Y119D3B.12	80	35.165	ENSPPAG00000025115	LUC7L3	65	47.059	Pan_paniscus
WBGene00022489	Y119D3B.12	80	35.165	ENSPPRG00000002605	LUC7L3	68	47.170	Panthera_pardus
WBGene00022489	Y119D3B.12	80	35.165	ENSPTRG00000009409	LUC7L3	65	47.059	Pan_troglodytes
WBGene00022489	Y119D3B.12	80	35.165	ENSPANG00000022461	LUC7L3	94	36.910	Papio_anubis
WBGene00022489	Y119D3B.12	80	33.149	ENSPKIG00000015002	-	53	36.100	Paramormyrops_kingsleyae
WBGene00022489	Y119D3B.12	80	34.807	ENSPSIG00000012888	LUC7L3	65	31.132	Pelodiscus_sinensis
WBGene00022489	Y119D3B.12	80	35.165	ENSPEMG00000022694	Luc7l3	70	31.348	Peromyscus_maniculatus_bairdii
WBGene00022489	Y119D3B.12	57	35.417	ENSPMAG00000004423	luc7l	64	35.417	Petromyzon_marinus
WBGene00022489	Y119D3B.12	80	34.807	ENSPMAG00000001483	luc7l3	51	33.984	Petromyzon_marinus
WBGene00022489	Y119D3B.12	80	34.615	ENSPCIG00000012372	LUC7L3	70	30.721	Phascolarctos_cinereus
WBGene00022489	Y119D3B.12	80	34.807	ENSPLAG00000009062	luc7l3	71	32.113	Poecilia_latipinna
WBGene00022489	Y119D3B.12	80	33.862	ENSPPYG00000008273	LUC7L3	65	30.675	Pongo_abelii
WBGene00022489	Y119D3B.12	80	34.066	ENSPCAG00000004272	LUC7L3	70	30.721	Procavia_capensis
WBGene00022489	Y119D3B.12	80	35.165	ENSPCOG00000022270	LUC7L3	65	47.059	Propithecus_coquereli
WBGene00022489	Y119D3B.12	80	35.165	ENSPVAG00000013895	LUC7L3	80	31.348	Pteropus_vampyrus
WBGene00022489	Y119D3B.12	80	34.807	ENSPNYG00000013291	luc7l3	70	31.831	Pundamilia_nyererei
WBGene00022489	Y119D3B.12	80	35.165	ENSRNOG00000002835	Luc7l3	62	31.034	Rattus_norvegicus
WBGene00022489	Y119D3B.12	80	35.165	ENSRBIG00000032055	LUC7L3	65	47.059	Rhinopithecus_bieti
WBGene00022489	Y119D3B.12	80	35.165	ENSRROG00000039925	LUC7L3	65	47.059	Rhinopithecus_roxellana
WBGene00022489	Y119D3B.12	80	35.165	ENSSBOG00000034373	LUC7L3	65	47.059	Saimiri_boliviensis_boliviensis
WBGene00022489	Y119D3B.12	80	35.165	ENSSHAG00000016168	LUC7L3	70	31.034	Sarcophilus_harrisii
WBGene00022489	Y119D3B.12	77	34.682	ENSSFOG00015022582	luc7l3	66	31.392	Scleropages_formosus
WBGene00022489	Y119D3B.12	80	34.807	ENSSDUG00000001183	luc7l3	53	30.530	Seriola_dumerili
WBGene00022489	Y119D3B.12	68	33.333	ENSSARG00000010189	LUC7L3	69	30.000	Sorex_araneus
WBGene00022489	Y119D3B.12	68	33.333	ENSSPUG00000010664	-	66	30.000	Sphenodon_punctatus
WBGene00022489	Y119D3B.12	80	30.220	ENSSSCG00000037460	-	72	30.220	Sus_scrofa
WBGene00022489	Y119D3B.12	80	35.165	ENSSSCG00000017555	-	80	30.748	Sus_scrofa
WBGene00022489	Y119D3B.12	58	30.534	ENSTGUG00000014635	-	98	30.534	Taeniopygia_guttata
WBGene00022489	Y119D3B.12	80	34.807	ENSTGUG00000009216	-	70	31.132	Taeniopygia_guttata
WBGene00022489	Y119D3B.12	80	34.807	ENSTNIG00000012633	luc7l3	60	35.802	Tetraodon_nigroviridis
WBGene00022489	Y119D3B.12	80	35.165	ENSTTRG00000000222	LUC7L3	70	31.348	Tursiops_truncatus
WBGene00022489	Y119D3B.12	80	35.165	ENSUMAG00000014056	LUC7L3	69	31.034	Ursus_maritimus
WBGene00022489	Y119D3B.12	80	35.165	ENSVVUG00000011112	LUC7L3	64	31.348	Vulpes_vulpes
WBGene00022489	Y119D3B.12	80	34.807	ENSXETG00000011062	luc7l3	75	31.686	Xenopus_tropicalis
WBGene00022489	Y119D3B.12	80	34.807	ENSXCOG00000018363	luc7l3	63	31.715	Xiphophorus_couchianus
WBGene00022489	Y119D3B.12	80	34.807	ENSXMAG00000014091	luc7l3	53	36.929	Xiphophorus_maculatus
WBGene00022489	Y119D3B.12	78	30.286	ENSXMAG00000018644	luc7l	52	30.286	Xiphophorus_maculatus