EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: WBGene00022678 (Gene tree)
Gene ID: -
Gene Symbol: sar-1
Alias: -
Full Name: GTP-binding protein SAR1
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Minus strand
Length: 1424 bases
Position: chrIV:4511896-4513319
Accession: Q23445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ZK180	MMR_HSR1	PF01926.23	1.4e-07	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ZK180.4	-	1071	-	ZK180.4	193 (aa)	NP_500582	Q23445

Gene Model

Click here to download WBGene00022678's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00022678's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
WBGene00022678	sar-1	79	31.928	WBGene00000193	arl-6	87	31.928
WBGene00022678	sar-1	67	36.641	WBGene00000192	arl-8	71	36.641
WBGene00022678	sar-1	89	33.140	WBGene00000188	arl-3	87	33.140
WBGene00022678	sar-1	74	31.579	WBGene00000182	arf-1.2	84	31.579
WBGene00022678	sar-1	92	30.168	WBGene00000183	arf-3	92	30.168

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00022678	sar-1	100	62.887	ENSCING00000005807	-	100	62.887	Ciona_intestinalis
WBGene00022678	sar-1	98	57.812	YPL218W	-	98	57.812	Saccharomyces_cerevisiae