EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00022739 (Gene tree)
Gene ID: -
Gene Symbol: toe-1
Alias: -
Full Name: HEAT repeat-containing protein 1 homolog
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: confidence
Strand: Plus strand
Length: 7447 bases
Position: chrII:4425167-4432613
Accession: Q23495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ZK430	U3snoRNP10	PF12397.8	1.8e-19	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA binding proteomes in eukaryotic organisms	mRBPome & elegans	2015 Nov 23	Matia-Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ZK430.1	-	5113	NM_062381	ZK430.1	1650 (aa)	NP_494782	Q23495

Gene Model

Click here to download WBGene00022739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00022739's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00022739	toe-1	85	30.081	ENSAMEG00000001015	HEATR1	61	30.081	Ailuropoda_melanoleuca
WBGene00022739	toe-1	84	30.352	ENSANAG00000021975	HEATR1	65	30.352	Aotus_nancymaae
WBGene00022739	toe-1	85	30.081	ENSCAFG00000010919	HEATR1	61	30.081	Canis_familiaris
WBGene00022739	toe-1	91	30.081	ENSCAFG00020026884	HEATR1	89	30.435	Canis_lupus_dingo
WBGene00022739	toe-1	84	30.526	ENSCCAG00000037071	HEATR1	64	30.352	Cebus_capucinus
WBGene00022739	toe-1	85	30.081	ENSDNOG00000009046	HEATR1	61	30.081	Dasypus_novemcinctus
WBGene00022739	toe-1	84	30.352	ENSGGOG00000006913	HEATR1	64	30.352	Gorilla_gorilla
WBGene00022739	toe-1	85	30.081	ENSSTOG00000007293	HEATR1	61	30.081	Ictidomys_tridecemlineatus
WBGene00022739	toe-1	84	30.081	ENSMFAG00000044672	HEATR1	61	30.081	Macaca_fascicularis
WBGene00022739	toe-1	84	30.081	ENSMMUG00000015135	HEATR1	64	30.081	Macaca_mulatta
WBGene00022739	toe-1	84	30.081	ENSMNEG00000035612	HEATR1	64	30.081	Macaca_nemestrina
WBGene00022739	toe-1	84	30.081	ENSMLEG00000035012	HEATR1	64	30.081	Mandrillus_leucophaeus
WBGene00022739	toe-1	85	30.081	ENSMUSG00000050244	Heatr1	84	31.438	Mus_musculus
WBGene00022739	toe-1	85	30.623	MGP_PahariEiJ_G0019273	Heatr1	61	30.623	Mus_pahari
WBGene00022739	toe-1	85	30.081	MGP_SPRETEiJ_G0019081	Heatr1	61	30.081	Mus_spretus
WBGene00022739	toe-1	85	30.081	ENSMPUG00000012748	HEATR1	61	30.081	Mustela_putorius_furo
WBGene00022739	toe-1	75	33.333	ENSOPRG00000010081	HEATR1	55	33.333	Ochotona_princeps
WBGene00022739	toe-1	88	30.894	ENSPPRG00000014254	HEATR1	64	30.894	Panthera_pardus
WBGene00022739	toe-1	88	31.165	ENSPTIG00000017413	HEATR1	64	31.165	Panthera_tigris_altaica
WBGene00022739	toe-1	84	30.081	ENSPTRG00000002141	HEATR1	64	30.081	Pan_troglodytes
WBGene00022739	toe-1	84	30.081	ENSPANG00000020212	HEATR1	61	30.081	Papio_anubis
WBGene00022739	toe-1	84	30.081	ENSRBIG00000039995	HEATR1	64	30.081	Rhinopithecus_bieti
WBGene00022739	toe-1	84	30.081	ENSSBOG00000033349	HEATR1	64	30.081	Saimiri_boliviensis_boliviensis
WBGene00022739	toe-1	85	30.352	ENSVVUG00000009369	HEATR1	61	30.352	Vulpes_vulpes