EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00050885 (Gene tree)
Gene ID: -
Gene Symbol: Y94H6A.12
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 1097 bases
Position: chrIV:2711939-2713035
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
Y94H6A	PTH2	PF01981.16	8.8e-20	1	1
Y94H6A	PTH2	PF01981.16	8.8e-20	1	1
Y94H6A	PTH2	PF01981.16	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
Y94H6A.12b	-	272	-	Y94H6A.12b	60 (aa)	NP_001294319	U4PE54
Y94H6A.12a.2	-	442	NM_001129359	Y94H6A.12a.2	120 (aa)	NP_001122831	A7WK43
Y94H6A.12a.1	-	431	NM_001129359	Y94H6A.12a.1	120 (aa)	NP_001122831	A7WK43

Gene Model

Click here to download WBGene00050885's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00050885's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00050885	Y94H6A.12	100	45.161	ENSG00000184924	PTRHD1	81	44.737	Homo_sapiens
WBGene00050885	Y94H6A.12	100	48.000	ENSAPOG00000024433	ptrhd1	99	48.000	Acanthochromis_polyacanthus
WBGene00050885	Y94H6A.12	100	43.548	ENSAMEG00000002651	PTRHD1	81	44.737	Ailuropoda_melanoleuca
WBGene00050885	Y94H6A.12	100	46.774	ENSACIG00000002596	ptrhd1	90	50.442	Amphilophus_citrinellus
WBGene00050885	Y94H6A.12	100	48.000	ENSAOCG00000007632	ptrhd1	99	48.000	Amphiprion_ocellaris
WBGene00050885	Y94H6A.12	100	48.000	ENSAPEG00000011491	ptrhd1	99	48.000	Amphiprion_percula
WBGene00050885	Y94H6A.12	100	48.387	ENSATEG00000019199	ptrhd1	90	51.327	Anabas_testudineus
WBGene00050885	Y94H6A.12	100	45.161	ENSANAG00000019089	PTRHD1	81	44.737	Aotus_nancymaae
WBGene00050885	Y94H6A.12	100	46.774	ENSACLG00000000814	ptrhd1	90	51.327	Astatotilapia_calliptera
WBGene00050885	Y94H6A.12	100	43.548	ENSAMXG00000034266	ptrhd1	78	46.903	Astyanax_mexicanus
WBGene00050885	Y94H6A.12	100	48.387	ENSBTAG00000015012	PTRHD1	81	47.368	Bos_taurus
WBGene00050885	Y94H6A.12	100	46.774	ENSCJAG00000008012	PTRHD1	81	45.614	Callithrix_jacchus
WBGene00050885	Y94H6A.12	100	45.161	ENSCAFG00000024865	PTRHD1	81	44.737	Canis_familiaris
WBGene00050885	Y94H6A.12	100	48.387	ENSCHIG00000014757	PTRHD1	81	46.491	Capra_hircus
WBGene00050885	Y94H6A.12	100	45.161	ENSTSYG00000009995	PTRHD1	81	44.737	Carlito_syrichta
WBGene00050885	Y94H6A.12	100	41.935	ENSCPOG00000005561	PTRHD1	81	44.737	Cavia_porcellus
WBGene00050885	Y94H6A.12	100	45.161	ENSCCAG00000033856	PTRHD1	81	44.737	Cebus_capucinus
WBGene00050885	Y94H6A.12	100	45.161	ENSCATG00000033690	PTRHD1	81	45.133	Cercocebus_atys
WBGene00050885	Y94H6A.12	100	45.161	ENSCLAG00000006505	PTRHD1	79	44.737	Chinchilla_lanigera
WBGene00050885	Y94H6A.12	100	45.161	ENSCSAG00000008490	PTRHD1	81	44.737	Chlorocebus_sabaeus
WBGene00050885	Y94H6A.12	97	45.000	ENSCHOG00000001920	PTRHD1	87	35.593	Choloepus_hoffmanni
WBGene00050885	Y94H6A.12	100	45.161	ENSCPBG00000022276	PTRHD1	87	43.443	Chrysemys_picta_bellii
WBGene00050885	Y94H6A.12	100	41.935	ENSCING00000019647	-	98	43.103	Ciona_intestinalis
WBGene00050885	Y94H6A.12	100	45.161	ENSCANG00000034444	PTRHD1	81	44.737	Colobus_angolensis_palliatus
WBGene00050885	Y94H6A.12	100	45.161	ENSCGRG00001003289	Ptrhd1	54	44.737	Cricetulus_griseus_chok1gshd
WBGene00050885	Y94H6A.12	100	45.161	ENSCGRG00000011834	Ptrhd1	81	44.737	Cricetulus_griseus_crigri
WBGene00050885	Y94H6A.12	100	49.206	ENSCSEG00000006943	ptrhd1	90	51.754	Cynoglossus_semilaevis
WBGene00050885	Y94H6A.12	100	48.800	ENSCVAG00000016345	ptrhd1	99	48.800	Cyprinodon_variegatus
WBGene00050885	Y94H6A.12	100	47.200	ENSDARG00000016122	ptrhd1	99	47.200	Danio_rerio
WBGene00050885	Y94H6A.12	100	45.161	ENSDNOG00000043646	PTRHD1	75	45.614	Dasypus_novemcinctus
WBGene00050885	Y94H6A.12	100	45.161	ENSDORG00000026776	Ptrhd1	82	43.860	Dipodomys_ordii
WBGene00050885	Y94H6A.12	100	45.161	FBgn0038446	CG14903	97	43.103	Drosophila_melanogaster
WBGene00050885	Y94H6A.12	94	40.351	ENSETEG00000009379	-	85	40.351	Echinops_telfairi
WBGene00050885	Y94H6A.12	100	45.161	ENSEBUG00000002249	ptrhd1	97	47.863	Eptatretus_burgeri
WBGene00050885	Y94H6A.12	97	38.333	ENSEASG00005001302	-	80	31.579	Equus_asinus_asinus
WBGene00050885	Y94H6A.12	97	38.333	ENSECAG00000005314	-	78	33.333	Equus_caballus
WBGene00050885	Y94H6A.12	100	45.161	ENSECAG00000017730	PTRHD1	81	46.491	Equus_caballus
WBGene00050885	Y94H6A.12	100	45.161	ENSEEUG00000004263	PTRHD1	81	45.614	Erinaceus_europaeus
WBGene00050885	Y94H6A.12	99	44.628	ENSELUG00000003837	ptrhd1	96	44.628	Esox_lucius
WBGene00050885	Y94H6A.12	100	45.161	ENSFCAG00000003648	PTRHD1	81	45.614	Felis_catus
WBGene00050885	Y94H6A.12	100	45.161	ENSFDAG00000004017	PTRHD1	81	44.737	Fukomys_damarensis
WBGene00050885	Y94H6A.12	100	48.387	ENSFHEG00000009135	ptrhd1	94	49.153	Fundulus_heteroclitus
WBGene00050885	Y94H6A.12	100	38.710	ENSGALG00000016610	PTRHD1	83	41.026	Gallus_gallus
WBGene00050885	Y94H6A.12	100	48.387	ENSGAFG00000005717	ptrhd1	94	48.305	Gambusia_affinis
WBGene00050885	Y94H6A.12	100	45.161	ENSGACG00000006743	ptrhd1	89	48.673	Gasterosteus_aculeatus
WBGene00050885	Y94H6A.12	100	46.774	ENSGAGG00000023951	PTRHD1	94	45.378	Gopherus_agassizii
WBGene00050885	Y94H6A.12	100	43.548	ENSGGOG00000043870	PTRHD1	90	43.860	Gorilla_gorilla
WBGene00050885	Y94H6A.12	100	46.774	ENSHBUG00000014289	ptrhd1	90	51.327	Haplochromis_burtoni
WBGene00050885	Y94H6A.12	100	45.161	ENSHGLG00000008203	PTRHD1	81	43.860	Heterocephalus_glaber_female
WBGene00050885	Y94H6A.12	100	45.161	ENSHGLG00100004341	-	83	42.105	Heterocephalus_glaber_male
WBGene00050885	Y94H6A.12	100	43.548	ENSHGLG00100012553	PTRHD1	81	42.982	Heterocephalus_glaber_male
WBGene00050885	Y94H6A.12	100	48.387	ENSHCOG00000013504	ptrhd1	89	50.442	Hippocampus_comes
WBGene00050885	Y94H6A.12	100	48.387	ENSIPUG00000004885	ptrhd1	95	50.442	Ictalurus_punctatus
WBGene00050885	Y94H6A.12	100	45.161	ENSSTOG00000006030	PTRHD1	81	44.737	Ictidomys_tridecemlineatus
WBGene00050885	Y94H6A.12	100	46.774	ENSJJAG00000024180	Ptrhd1	83	47.368	Jaculus_jaculus
WBGene00050885	Y94H6A.12	100	43.548	ENSKMAG00000016961	ptrhd1	99	48.214	Kryptolebias_marmoratus
WBGene00050885	Y94H6A.12	100	48.000	ENSLBEG00000024406	ptrhd1	99	48.000	Labrus_bergylta
WBGene00050885	Y94H6A.12	84	51.456	ENSLACG00000018052	PTRHD1	90	51.327	Latimeria_chalumnae
WBGene00050885	Y94H6A.12	100	43.548	ENSLOCG00000015890	ptrhd1	88	48.673	Lepisosteus_oculatus
WBGene00050885	Y94H6A.12	100	46.774	ENSLAFG00000014453	PTRHD1	81	46.491	Loxodonta_africana
WBGene00050885	Y94H6A.12	100	45.161	ENSMFAG00000040267	PTRHD1	81	44.737	Macaca_fascicularis
WBGene00050885	Y94H6A.12	100	45.161	ENSMMUG00000009598	PTRHD1	81	44.737	Macaca_mulatta
WBGene00050885	Y94H6A.12	100	45.161	ENSMNEG00000035044	PTRHD1	81	44.737	Macaca_nemestrina
WBGene00050885	Y94H6A.12	100	45.161	ENSMLEG00000030314	PTRHD1	81	42.478	Mandrillus_leucophaeus
WBGene00050885	Y94H6A.12	100	50.000	ENSMAMG00000021201	ptrhd1	90	50.442	Mastacembelus_armatus
WBGene00050885	Y94H6A.12	100	46.774	ENSMZEG00005021808	ptrhd1	90	51.327	Maylandia_zebra
WBGene00050885	Y94H6A.12	100	43.548	ENSMAUG00000019251	Ptrhd1	81	43.860	Mesocricetus_auratus
WBGene00050885	Y94H6A.12	100	46.774	ENSMICG00000001578	PTRHD1	81	46.491	Microcebus_murinus
WBGene00050885	Y94H6A.12	100	45.161	ENSMOCG00000001204	Ptrhd1	81	44.737	Microtus_ochrogaster
WBGene00050885	Y94H6A.12	100	43.548	ENSMMOG00000015284	ptrhd1	92	47.414	Mola_mola
WBGene00050885	Y94H6A.12	97	41.176	ENSMODG00000015895	PTRHD1	88	41.176	Monodelphis_domestica
WBGene00050885	Y94H6A.12	100	50.000	ENSMALG00000003471	ptrhd1	90	50.442	Monopterus_albus
WBGene00050885	Y94H6A.12	100	45.161	MGP_CAROLIEiJ_G0017582	Ptrhd1	81	44.737	Mus_caroli
WBGene00050885	Y94H6A.12	100	45.161	ENSMUSG00000096199	Ptrhd1	81	44.737	Mus_musculus
WBGene00050885	Y94H6A.12	100	45.161	MGP_SPRETEiJ_G0018426	Ptrhd1	81	44.737	Mus_spretus
WBGene00050885	Y94H6A.12	100	46.774	ENSMPUG00000014016	PTRHD1	81	46.491	Mustela_putorius_furo
WBGene00050885	Y94H6A.12	100	45.161	ENSMLUG00000014127	PTRHD1	81	44.737	Myotis_lucifugus
WBGene00050885	Y94H6A.12	100	43.548	ENSNGAG00000016335	Ptrhd1	81	43.860	Nannospalax_galili
WBGene00050885	Y94H6A.12	100	46.774	ENSNBRG00000009690	ptrhd1	90	51.327	Neolamprologus_brichardi
WBGene00050885	Y94H6A.12	100	45.161	ENSNLEG00000000990	PTRHD1	81	44.737	Nomascus_leucogenys
WBGene00050885	Y94H6A.12	52	46.032	ENSMEUG00000010482	-	76	46.032	Notamacropus_eugenii
WBGene00050885	Y94H6A.12	100	40.323	ENSOPRG00000008600	PTRHD1	81	42.982	Ochotona_princeps
WBGene00050885	Y94H6A.12	100	45.161	ENSODEG00000007805	PTRHD1	79	44.737	Octodon_degus
WBGene00050885	Y94H6A.12	100	45.161	ENSONIG00000015722	ptrhd1	83	50.442	Oreochromis_niloticus
WBGene00050885	Y94H6A.12	100	43.548	ENSOCUG00000015432	PTRHD1	89	43.200	Oryctolagus_cuniculus
WBGene00050885	Y94H6A.12	100	44.444	ENSORLG00000028768	ptrhd1	97	48.246	Oryzias_latipes
WBGene00050885	Y94H6A.12	100	44.444	ENSORLG00020002857	ptrhd1	97	48.246	Oryzias_latipes_hni
WBGene00050885	Y94H6A.12	100	44.444	ENSORLG00015018271	ptrhd1	97	48.246	Oryzias_latipes_hsok
WBGene00050885	Y94H6A.12	100	43.548	ENSOMEG00000017594	ptrhd1	89	47.788	Oryzias_melastigma
WBGene00050885	Y94H6A.12	100	48.387	ENSOGAG00000000756	PTRHD1	81	45.614	Otolemur_garnettii
WBGene00050885	Y94H6A.12	100	48.387	ENSOARG00000018052	PTRHD1	81	47.368	Ovis_aries
WBGene00050885	Y94H6A.12	100	45.161	ENSPPAG00000035395	PTRHD1	81	44.737	Pan_paniscus
WBGene00050885	Y94H6A.12	100	45.161	ENSPPRG00000022961	PTRHD1	81	45.614	Panthera_pardus
WBGene00050885	Y94H6A.12	100	45.161	ENSPTIG00000012136	PTRHD1	81	45.614	Panthera_tigris_altaica
WBGene00050885	Y94H6A.12	100	45.161	ENSPTRG00000011716	PTRHD1	81	44.737	Pan_troglodytes
WBGene00050885	Y94H6A.12	100	43.548	ENSPANG00000006781	PTRHD1	81	43.860	Papio_anubis
WBGene00050885	Y94H6A.12	100	45.161	ENSPKIG00000015207	ptrhd1	82	44.628	Paramormyrops_kingsleyae
WBGene00050885	Y94H6A.12	100	48.387	ENSPMGG00000020297	ptrhd1	94	49.153	Periophthalmus_magnuspinnatus
WBGene00050885	Y94H6A.12	93	42.478	ENSPMAG00000007352	ptrhd1	96	42.975	Petromyzon_marinus
WBGene00050885	Y94H6A.12	100	38.710	ENSPCIG00000025242	PTRHD1	90	42.105	Phascolarctos_cinereus
WBGene00050885	Y94H6A.12	100	48.387	ENSPFOG00000004468	ptrhd1	84	48.305	Poecilia_formosa
WBGene00050885	Y94H6A.12	100	48.387	ENSPLAG00000018019	ptrhd1	94	48.305	Poecilia_latipinna
WBGene00050885	Y94H6A.12	100	48.387	ENSPMEG00000001321	ptrhd1	94	48.305	Poecilia_mexicana
WBGene00050885	Y94H6A.12	100	48.387	ENSPREG00000017624	ptrhd1	94	48.305	Poecilia_reticulata
WBGene00050885	Y94H6A.12	100	45.161	ENSPPYG00000012597	PTRHD1	81	44.737	Pongo_abelii
WBGene00050885	Y94H6A.12	100	46.774	ENSPCAG00000007535	PTRHD1	81	46.491	Procavia_capensis
WBGene00050885	Y94H6A.12	100	46.774	ENSPCOG00000003110	PTRHD1	81	45.614	Propithecus_coquereli
WBGene00050885	Y94H6A.12	100	43.548	ENSPVAG00000017514	PTRHD1	81	43.860	Pteropus_vampyrus
WBGene00050885	Y94H6A.12	100	46.774	ENSPNYG00000016755	ptrhd1	90	51.327	Pundamilia_nyererei
WBGene00050885	Y94H6A.12	100	43.548	ENSPNAG00000028214	ptrhd1	89	47.788	Pygocentrus_nattereri
WBGene00050885	Y94H6A.12	100	46.774	ENSRNOG00000004059	Ptrhd1	81	45.614	Rattus_norvegicus
WBGene00050885	Y94H6A.12	100	45.161	ENSRBIG00000032190	PTRHD1	81	44.737	Rhinopithecus_bieti
WBGene00050885	Y94H6A.12	100	45.161	ENSRROG00000029627	PTRHD1	81	44.737	Rhinopithecus_roxellana
WBGene00050885	Y94H6A.12	100	45.161	ENSSBOG00000031751	PTRHD1	81	44.737	Saimiri_boliviensis_boliviensis
WBGene00050885	Y94H6A.12	100	38.710	ENSSHAG00000005774	PTRHD1	77	40.336	Sarcophilus_harrisii
WBGene00050885	Y94H6A.12	100	43.548	ENSSFOG00015000526	ptrhd1	93	46.018	Scleropages_formosus
WBGene00050885	Y94H6A.12	100	45.161	ENSSMAG00000004450	ptrhd1	95	47.107	Scophthalmus_maximus
WBGene00050885	Y94H6A.12	100	48.387	ENSSDUG00000004610	ptrhd1	76	51.327	Seriola_dumerili
WBGene00050885	Y94H6A.12	100	48.387	ENSSLDG00000006231	ptrhd1	90	51.327	Seriola_lalandi_dorsalis
WBGene00050885	Y94H6A.12	100	45.161	ENSSPUG00000002905	PTRHD1	86	46.491	Sphenodon_punctatus
WBGene00050885	Y94H6A.12	100	48.800	ENSSPAG00000000997	ptrhd1	99	48.800	Stegastes_partitus
WBGene00050885	Y94H6A.12	92	43.636	ENSSSCG00000040441	-	76	37.634	Sus_scrofa
WBGene00050885	Y94H6A.12	100	40.323	ENSTGUG00000015169	-	86	41.525	Taeniopygia_guttata
WBGene00050885	Y94H6A.12	100	46.774	ENSTRUG00000007201	ptrhd1	90	49.558	Takifugu_rubripes
WBGene00050885	Y94H6A.12	100	41.935	ENSTNIG00000019143	ptrhd1	90	46.018	Tetraodon_nigroviridis
WBGene00050885	Y94H6A.12	100	48.387	ENSTTRG00000015128	PTRHD1	71	46.465	Tursiops_truncatus
WBGene00050885	Y94H6A.12	100	43.548	ENSUAMG00000007305	PTRHD1	81	44.737	Ursus_americanus
WBGene00050885	Y94H6A.12	100	48.387	ENSVPAG00000005556	PTRHD1	82	48.246	Vicugna_pacos
WBGene00050885	Y94H6A.12	84	50.485	ENSXETG00000021176	ptrhd1	83	48.696	Xenopus_tropicalis
WBGene00050885	Y94H6A.12	100	48.387	ENSXCOG00000019083	ptrhd1	94	48.305	Xiphophorus_couchianus
WBGene00050885	Y94H6A.12	100	48.387	ENSXMAG00000024458	ptrhd1	94	48.305	Xiphophorus_maculatus