EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: WBGene00194707 (Gene tree)
Gene ID: -
Gene Symbol: C53A5.17
Alias: -
Full Name: tRNA (guanine(37)-N1)-methyltransferase
Gene Type: protein_coding
Species: Caenorhabditis_elegans
Status: putative
Strand: Minus strand
Length: 1730 bases
Position: chrV:14519371-14521100
Accession: A8WHT1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
C53A5	TRM	PF02005.16	1.8e-06	1	1
C53A5	Met_10	PF02475.16	8e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
C53A5.17	-	1622	NM_001269663	C53A5.17	474 (aa)	NP_001256592	A8WHT1

Gene Model

Click here to download WBGene00194707's gene model file

Protein-Protein Interaction (PPI)

Clik here to download WBGene00194707's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
WBGene00194707	C53A5.17	91	33.487	ENSG00000126814	TRMT5	79	33.487	Homo_sapiens
WBGene00194707	C53A5.17	97	34.979	ENSAPOG00000015490	trmt5	93	35.240	Acanthochromis_polyacanthus
WBGene00194707	C53A5.17	93	33.333	ENSAMEG00000002979	TRMT5	80	33.333	Ailuropoda_melanoleuca
WBGene00194707	C53A5.17	97	34.904	ENSACIG00000024216	trmt5	95	35.520	Amphilophus_citrinellus
WBGene00194707	C53A5.17	98	34.664	ENSAOCG00000007757	trmt5	91	35.566	Amphiprion_ocellaris
WBGene00194707	C53A5.17	98	35.504	ENSAPEG00000022718	trmt5	91	36.490	Amphiprion_percula
WBGene00194707	C53A5.17	91	35.417	ENSATEG00000015576	trmt5	84	35.650	Anabas_testudineus
WBGene00194707	C53A5.17	95	34.945	ENSAPLG00000008002	TRMT5	82	35.240	Anas_platyrhynchos
WBGene00194707	C53A5.17	96	33.909	ENSACAG00000006533	TRMT5	79	34.624	Anolis_carolinensis
WBGene00194707	C53A5.17	91	32.949	ENSANAG00000024875	TRMT5	73	32.949	Aotus_nancymaae
WBGene00194707	C53A5.17	97	33.400	ENSACLG00000020216	trmt5	86	32.696	Astatotilapia_calliptera
WBGene00194707	C53A5.17	97	34.375	ENSAMXG00000021299	trmt5	86	34.914	Astyanax_mexicanus
WBGene00194707	C53A5.17	91	32.273	ENSBTAG00000011796	TRMT5	81	32.273	Bos_taurus
WBGene00194707	C53A5.17	91	32.727	ENSCJAG00000019157	TRMT5	79	32.727	Callithrix_jacchus
WBGene00194707	C53A5.17	97	32.974	ENSCAFG00000015647	TRMT5	82	33.793	Canis_familiaris
WBGene00194707	C53A5.17	97	32.974	ENSCAFG00020008016	TRMT5	82	33.793	Canis_lupus_dingo
WBGene00194707	C53A5.17	97	31.760	ENSCHIG00000018801	TRMT5	81	32.723	Capra_hircus
WBGene00194707	C53A5.17	93	31.416	ENSTSYG00000001043	TRMT5	83	31.416	Carlito_syrichta
WBGene00194707	C53A5.17	98	32.762	ENSCPOG00000014396	TRMT5	80	33.105	Cavia_porcellus
WBGene00194707	C53A5.17	91	33.867	ENSCCAG00000037835	TRMT5	79	33.867	Cebus_capucinus
WBGene00194707	C53A5.17	91	34.411	ENSCATG00000045352	TRMT5	79	34.411	Cercocebus_atys
WBGene00194707	C53A5.17	98	33.122	ENSCLAG00000013155	TRMT5	84	33.708	Chinchilla_lanigera
WBGene00194707	C53A5.17	91	33.409	ENSCSAG00000014159	TRMT5	72	33.409	Chlorocebus_sabaeus
WBGene00194707	C53A5.17	75	35.775	ENSCHOG00000008128	-	76	37.117	Choloepus_hoffmanni
WBGene00194707	C53A5.17	98	32.696	ENSCPBG00000022359	TRMT5	84	32.391	Chrysemys_picta_bellii
WBGene00194707	C53A5.17	99	31.622	ENSCING00000018970	-	96	33.460	Ciona_intestinalis
WBGene00194707	C53A5.17	99	33.195	ENSCSAVG00000000418	-	92	33.114	Ciona_savignyi
WBGene00194707	C53A5.17	91	34.180	ENSCANG00000032648	TRMT5	79	34.180	Colobus_angolensis_palliatus
WBGene00194707	C53A5.17	97	34.468	ENSCGRG00001018337	TRMT5	91	34.607	Cricetulus_griseus_chok1gshd
WBGene00194707	C53A5.17	97	34.468	ENSCGRG00000010454	Trmt5	80	34.607	Cricetulus_griseus_crigri
WBGene00194707	C53A5.17	92	34.703	ENSCSEG00000001533	trmt5	85	34.703	Cynoglossus_semilaevis
WBGene00194707	C53A5.17	98	34.607	ENSCVAG00000007630	trmt5	98	34.052	Cyprinodon_variegatus
WBGene00194707	C53A5.17	98	32.851	ENSDARG00000069278	trmt5	86	33.626	Danio_rerio
WBGene00194707	C53A5.17	91	33.333	ENSDNOG00000019211	TRMT5	79	33.409	Dasypus_novemcinctus
WBGene00194707	C53A5.17	97	33.691	ENSDORG00000015555	Trmt5	81	34.325	Dipodomys_ordii
WBGene00194707	C53A5.17	93	35.650	FBgn0052281	CG32281	91	35.650	Drosophila_melanogaster
WBGene00194707	C53A5.17	72	37.500	ENSETEG00000017163	TRMT5	65	37.500	Echinops_telfairi
WBGene00194707	C53A5.17	66	34.650	ENSEBUG00000002145	trmt5	54	34.795	Eptatretus_burgeri
WBGene00194707	C53A5.17	97	32.181	ENSEASG00005016123	TRMT5	81	32.426	Equus_asinus_asinus
WBGene00194707	C53A5.17	97	32.181	ENSECAG00000000057	TRMT5	81	32.426	Equus_caballus
WBGene00194707	C53A5.17	97	33.473	ENSELUG00000011314	trmt5	81	33.556	Esox_lucius
WBGene00194707	C53A5.17	99	32.645	ENSFCAG00000006820	TRMT5	81	33.407	Felis_catus
WBGene00194707	C53A5.17	96	35.408	ENSFALG00000003430	TRMT5	81	36.283	Ficedula_albicollis
WBGene00194707	C53A5.17	91	34.101	ENSFDAG00000018556	TRMT5	79	34.101	Fukomys_damarensis
WBGene00194707	C53A5.17	97	34.402	ENSFHEG00000008062	trmt5	85	35.000	Fundulus_heteroclitus
WBGene00194707	C53A5.17	96	33.827	ENSGMOG00000010858	trmt5	95	33.987	Gadus_morhua
WBGene00194707	C53A5.17	98	33.404	ENSGALG00000011904	TRMT5	84	33.996	Gallus_gallus
WBGene00194707	C53A5.17	97	33.333	ENSGAFG00000004103	trmt5	89	33.406	Gambusia_affinis
WBGene00194707	C53A5.17	97	34.483	ENSGACG00000008470	trmt5	95	38.585	Gasterosteus_aculeatus
WBGene00194707	C53A5.17	98	32.479	ENSGAGG00000023507	TRMT5	81	32.426	Gopherus_agassizii
WBGene00194707	C53A5.17	91	33.410	ENSGGOG00000006831	TRMT5	80	33.410	Gorilla_gorilla
WBGene00194707	C53A5.17	97	35.760	ENSHBUG00000023000	trmt5	85	35.227	Haplochromis_burtoni
WBGene00194707	C53A5.17	98	32.623	ENSHGLG00000013713	TRMT5	90	32.955	Heterocephalus_glaber_female
WBGene00194707	C53A5.17	98	32.976	ENSHGLG00100002392	TRMT5	79	33.562	Heterocephalus_glaber_male
WBGene00194707	C53A5.17	92	33.860	ENSHCOG00000012203	trmt5	97	33.860	Hippocampus_comes
WBGene00194707	C53A5.17	97	35.220	ENSIPUG00000002612	trmt5	84	35.570	Ictalurus_punctatus
WBGene00194707	C53A5.17	97	33.120	ENSSTOG00000011865	TRMT5	82	33.713	Ictidomys_tridecemlineatus
WBGene00194707	C53A5.17	91	35.845	ENSJJAG00000009935	Trmt5	93	35.845	Jaculus_jaculus
WBGene00194707	C53A5.17	97	35.032	ENSKMAG00000005992	trmt5	93	35.214	Kryptolebias_marmoratus
WBGene00194707	C53A5.17	97	33.763	ENSLBEG00000023240	trmt5	93	34.018	Labrus_bergylta
WBGene00194707	C53A5.17	96	33.474	ENSLACG00000018464	TRMT5	91	33.624	Latimeria_chalumnae
WBGene00194707	C53A5.17	97	33.962	ENSLOCG00000010120	trmt5	94	34.341	Lepisosteus_oculatus
WBGene00194707	C53A5.17	98	32.839	ENSLAFG00000003616	TRMT5	80	33.409	Loxodonta_africana
WBGene00194707	C53A5.17	91	34.411	ENSMFAG00000002940	TRMT5	79	34.411	Macaca_fascicularis
WBGene00194707	C53A5.17	91	31.409	ENSMMUG00000013611	TRMT5	78	31.178	Macaca_mulatta
WBGene00194707	C53A5.17	91	34.411	ENSMNEG00000000131	TRMT5	79	34.411	Macaca_nemestrina
WBGene00194707	C53A5.17	91	34.411	ENSMLEG00000043649	TRMT5	79	34.411	Mandrillus_leucophaeus
WBGene00194707	C53A5.17	97	35.484	ENSMAMG00000001758	trmt5	83	36.073	Mastacembelus_armatus
WBGene00194707	C53A5.17	97	35.332	ENSMZEG00005007457	trmt5	85	34.773	Maylandia_zebra
WBGene00194707	C53A5.17	98	33.830	ENSMGAG00000013565	TRMT5	82	34.598	Meleagris_gallopavo
WBGene00194707	C53A5.17	97	33.970	ENSMAUG00000016091	Trmt5	81	33.557	Mesocricetus_auratus
WBGene00194707	C53A5.17	97	32.251	ENSMICG00000044351	TRMT5	79	33.025	Microcebus_murinus
WBGene00194707	C53A5.17	97	34.534	ENSMOCG00000020904	Trmt5	80	34.989	Microtus_ochrogaster
WBGene00194707	C53A5.17	96	34.858	ENSMMOG00000012159	trmt5	84	35.570	Mola_mola
WBGene00194707	C53A5.17	97	35.345	ENSMODG00000008664	TRMT5	80	36.322	Monodelphis_domestica
WBGene00194707	C53A5.17	98	34.388	ENSMALG00000009533	trmt5	84	34.607	Monopterus_albus
WBGene00194707	C53A5.17	94	32.770	MGP_CAROLIEiJ_G0017843	Trmt5	80	34.247	Mus_caroli
WBGene00194707	C53A5.17	91	35.388	ENSMUSG00000034442	Trmt5	80	35.388	Mus_musculus
WBGene00194707	C53A5.17	97	34.690	MGP_PahariEiJ_G0029601	Trmt5	80	35.616	Mus_pahari
WBGene00194707	C53A5.17	91	35.388	MGP_SPRETEiJ_G0018690	Trmt5	80	35.388	Mus_spretus
WBGene00194707	C53A5.17	91	33.410	ENSMPUG00000006435	TRMT5	68	33.410	Mustela_putorius_furo
WBGene00194707	C53A5.17	91	32.949	ENSMLUG00000002357	TRMT5	79	32.949	Myotis_lucifugus
WBGene00194707	C53A5.17	93	34.066	ENSNGAG00000012691	Trmt5	85	34.066	Nannospalax_galili
WBGene00194707	C53A5.17	97	35.546	ENSNBRG00000009536	trmt5	93	35.000	Neolamprologus_brichardi
WBGene00194707	C53A5.17	91	34.305	ENSNLEG00000013805	TRMT5	79	34.305	Nomascus_leucogenys
WBGene00194707	C53A5.17	79	35.013	ENSOPRG00000011719	TRMT5	69	35.013	Ochotona_princeps
WBGene00194707	C53A5.17	92	34.842	ENSODEG00000013922	TRMT5	85	34.842	Octodon_degus
WBGene00194707	C53A5.17	97	35.760	ENSONIG00000020115	trmt5	77	35.147	Oreochromis_niloticus
WBGene00194707	C53A5.17	97	34.267	ENSOCUG00000014281	TRMT5	82	34.676	Oryctolagus_cuniculus
WBGene00194707	C53A5.17	97	34.328	ENSORLG00000015734	trmt5	85	34.086	Oryzias_latipes
WBGene00194707	C53A5.17	97	34.105	ENSORLG00020009860	trmt5	85	33.853	Oryzias_latipes_hni
WBGene00194707	C53A5.17	97	34.542	ENSORLG00015008653	trmt5	97	33.860	Oryzias_latipes_hsok
WBGene00194707	C53A5.17	97	34.681	ENSOMEG00000006629	trmt5	87	35.099	Oryzias_melastigma
WBGene00194707	C53A5.17	97	31.965	ENSOGAG00000016088	TRMT5	79	32.719	Otolemur_garnettii
WBGene00194707	C53A5.17	91	33.181	ENSOARG00000021132	TRMT5	80	33.181	Ovis_aries
WBGene00194707	C53A5.17	91	33.718	ENSPPAG00000035176	TRMT5	80	33.718	Pan_paniscus
WBGene00194707	C53A5.17	99	32.848	ENSPPRG00000013336	TRMT5	82	33.628	Panthera_pardus
WBGene00194707	C53A5.17	81	34.848	ENSPTIG00000006744	TRMT5	78	34.848	Panthera_tigris_altaica
WBGene00194707	C53A5.17	91	33.718	ENSPTRG00000006415	TRMT5	80	33.718	Pan_troglodytes
WBGene00194707	C53A5.17	91	34.180	ENSPANG00000016605	TRMT5	79	34.180	Papio_anubis
WBGene00194707	C53A5.17	97	35.991	ENSPKIG00000018196	trmt5	93	36.264	Paramormyrops_kingsleyae
WBGene00194707	C53A5.17	97	32.548	ENSPSIG00000014128	TRMT5	83	32.166	Pelodiscus_sinensis
WBGene00194707	C53A5.17	98	32.762	ENSPMGG00000003882	trmt5	81	32.747	Periophthalmus_magnuspinnatus
WBGene00194707	C53A5.17	97	34.839	ENSPEMG00000022664	Trmt5	84	34.744	Peromyscus_maniculatus_bairdii
WBGene00194707	C53A5.17	96	35.792	ENSPCIG00000020458	TRMT5	80	35.955	Phascolarctos_cinereus
WBGene00194707	C53A5.17	97	34.047	ENSPFOG00000008680	trmt5	98	34.130	Poecilia_formosa
WBGene00194707	C53A5.17	91	34.852	ENSPLAG00000014197	trmt5	87	34.852	Poecilia_latipinna
WBGene00194707	C53A5.17	97	34.261	ENSPMEG00000014848	trmt5	89	34.130	Poecilia_mexicana
WBGene00194707	C53A5.17	97	34.194	ENSPREG00000015503	trmt5	99	34.354	Poecilia_reticulata
WBGene00194707	C53A5.17	91	33.718	ENSPPYG00000005877	TRMT5	79	33.718	Pongo_abelii
WBGene00194707	C53A5.17	58	35.507	ENSPCAG00000006616	-	52	35.507	Procavia_capensis
WBGene00194707	C53A5.17	91	33.949	ENSPCOG00000017447	TRMT5	79	33.949	Propithecus_coquereli
WBGene00194707	C53A5.17	97	35.546	ENSPNYG00000022005	trmt5	93	35.000	Pundamilia_nyererei
WBGene00194707	C53A5.17	97	33.970	ENSPNAG00000022427	trmt5	84	34.081	Pygocentrus_nattereri
WBGene00194707	C53A5.17	94	33.544	ENSRNOG00000007785	Trmt5	96	33.617	Rattus_norvegicus
WBGene00194707	C53A5.17	97	33.475	ENSRBIG00000033903	TRMT5	79	34.411	Rhinopithecus_bieti
WBGene00194707	C53A5.17	91	34.411	ENSRROG00000035334	TRMT5	79	34.411	Rhinopithecus_roxellana
WBGene00194707	C53A5.17	68	34.454	YHR070W	-	69	34.454	Saccharomyces_cerevisiae
WBGene00194707	C53A5.17	93	32.174	ENSSBOG00000027786	TRMT5	87	32.174	Saimiri_boliviensis_boliviensis
WBGene00194707	C53A5.17	97	35.421	ENSSHAG00000003232	TRMT5	81	36.092	Sarcophilus_harrisii
WBGene00194707	C53A5.17	97	34.043	ENSSFOG00015013093	trmt5	95	34.368	Scleropages_formosus
WBGene00194707	C53A5.17	97	35.244	ENSSMAG00000001616	trmt5	84	35.347	Scophthalmus_maximus
WBGene00194707	C53A5.17	97	34.914	ENSSDUG00000019541	trmt5	82	35.011	Seriola_dumerili
WBGene00194707	C53A5.17	97	34.914	ENSSLDG00000001680	trmt5	93	35.011	Seriola_lalandi_dorsalis
WBGene00194707	C53A5.17	97	32.181	ENSSARG00000012431	TRMT5	79	32.949	Sorex_araneus
WBGene00194707	C53A5.17	97	32.903	ENSSPUG00000010098	TRMT5	85	32.747	Sphenodon_punctatus
WBGene00194707	C53A5.17	97	35.421	ENSSPAG00000012940	trmt5	85	35.632	Stegastes_partitus
WBGene00194707	C53A5.17	97	33.047	ENSSSCG00000024529	TRMT5	81	33.638	Sus_scrofa
WBGene00194707	C53A5.17	93	34.590	ENSTGUG00000012988	TRMT5	86	34.590	Taeniopygia_guttata
WBGene00194707	C53A5.17	96	33.906	ENSTRUG00000010888	trmt5	87	34.292	Takifugu_rubripes
WBGene00194707	C53A5.17	91	36.180	ENSTNIG00000017342	trmt5	92	36.180	Tetraodon_nigroviridis
WBGene00194707	C53A5.17	91	32.719	ENSTBEG00000005659	TRMT5	79	32.719	Tupaia_belangeri
WBGene00194707	C53A5.17	97	32.403	ENSTTRG00000013839	TRMT5	80	33.410	Tursiops_truncatus
WBGene00194707	C53A5.17	97	32.397	ENSUAMG00000023288	TRMT5	82	32.880	Ursus_americanus
WBGene00194707	C53A5.17	90	33.256	ENSUMAG00000013736	TRMT5	93	33.256	Ursus_maritimus
WBGene00194707	C53A5.17	97	32.120	ENSVPAG00000002392	TRMT5	79	32.877	Vicugna_pacos
WBGene00194707	C53A5.17	91	34.169	ENSVVUG00000029464	TRMT5	82	34.169	Vulpes_vulpes
WBGene00194707	C53A5.17	92	35.000	ENSXETG00000014455	trmt5	82	35.000	Xenopus_tropicalis
WBGene00194707	C53A5.17	97	34.115	ENSXCOG00000008547	trmt5	90	34.354	Xiphophorus_couchianus
WBGene00194707	C53A5.17	97	33.617	ENSXMAG00000013474	trmt5	92	34.130	Xiphophorus_maculatus