EuRBPDB

Description

Ensembl ID: YAL005C (Gene tree)
Gene ID: -
Gene Symbol: SSA1
Alias: YG100
Full Name: ATPase involved in protein folding and NLS-directed nuclear transport%3B member of HSP70 family%3B required for ubiquitin-dependent degradation of short-lived proteins%3B forms chaperone complex with Ydj1p%3B localized to nucleus%2C cytoplasm%2C cell wall%3B 98%25 identical to paralog Ssa2p with different functional specificity in propagation of yeast
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 1929
Position: chrI: 139503-141431
Accession: S000000004
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YAL005C_mRNA	-	1929	-	YAL005C_mRNA	642 (aa)	-	P10591

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YAL005C	SSA1	100	97.664	YLL024C	SSA2	100	97.664	Saccharomyces_cerevisiae
YAL005C	SSA1	100	79.815	YBL075C	SSA3	100	79.353	Saccharomyces_cerevisiae
YAL005C	SSA1	100	81.269	YER103W	SSA4	95	83.580	Saccharomyces_cerevisiae