EuRBPDB

Description

Ensembl ID: YAL019W (Gene tree)
Gene ID: -
Gene Symbol: FUN30
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 3396
Position: chrI:114919-118314
Accession: S000000017
RBP type: canonical RBP
Summary: Snf2p family member with ATP-dependent chromatin remodeling activity%3B has a role in silencing at the mating type locus%2C telomeres and centromeres%3B enriched at centromeres and is required for correct chromatin structure around centromeres%2C as well as at the boundary element of the silent HMR%3B recruited to DNA double-strand breaks (DSBs) where it promotes 5' strand resection of DSBs%3B potential Cdc28p substrate

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YAL019W_mRNA	ResIII	PF04851.15	7.6e-13	1	1
YAL019W_mRNA	DEAD	PF00270.29	3.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YAL019W_mRNA	-	3396	-	YAL019W_mRNA	1131 (aa)	-	P31380

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YAL019W	-	52	40.397	YFR038W	-	65	34.966

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YAL019W	-	53	42.029	ENSACIG00000018326	smarcad1a	78	45.333	Amphilophus_citrinellus
YAL019W	-	50	43.772	ENSACAG00000013554	SMARCAD1	52	43.393	Anolis_carolinensis
YAL019W	-	51	41.897	ENSIPUG00000000242	smarcad1a	56	42.314	Ictalurus_punctatus
YAL019W	-	51	42.414	ENSPNAG00000001663	smarcad1a	56	42.142	Pygocentrus_nattereri