EuRBPDB

Description

Ensembl ID: YAL021C (Gene tree)
Gene ID: -
Gene Symbol: CCR4
Alias: FUN27|NUT21
Full Name: Component of the CCR4-NOT transcriptional complex%3B CCR4-NOT is involved in regulation of gene expression%3B component of the major cytoplasmic deadenylase%2C which is involved in mRNA poly(A) tail shortening
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 2514 bases
Position: chrI:110846-113359
Accession: S000000019
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YAL021C_mRNA	Exo_endo_phos	PF03372.23	4.9e-22	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YAL021C_mRNA	-	2514	-	YAL021C_mRNA	837 (aa)	-	P31384

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YAL021C	CCR4	59	37.262	WBGene00000376	ccr-4	89	39.106	Caenorhabditis_elegans
YAL021C	CCR4	59	35.084	ENSCING00000006911	-	91	35.084	Ciona_intestinalis
YAL021C	CCR4	59	37.548	FBgn0011725	twin	96	38.109	Drosophila_melanogaster