EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YAL025C (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Essential nuclear protein%3B constituent of 66S pre-ribosomal particles%3B required for maturation of 25S and 5.8S rRNAs%3B required for maintenance of M1 satellite double-stranded RNA of the L-A virus
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 921 bases
Position: chrI:100225-101145
Accession: S000000023
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YAL025C_mRNA	Ribosomal_L28e	PF01778.17	7.2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YAL025C_mRNA	-	921	-	YAL025C_mRNA	306 (aa)	-	P10962

Gene Model

Click here to download YAL025C's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YAL025C's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YAL025C	-	96	48.505	ENSG00000198042	MAK16	96	58.647	Homo_sapiens
YAL025C	-	95	47.297	ENSAPOG00000024252	mak16	79	49.793	Acanthochromis_polyacanthus
YAL025C	-	96	46.622	ENSAMEG00000002852	MAK16	81	50.000	Ailuropoda_melanoleuca
YAL025C	-	57	56.571	ENSACIG00000004962	mak16	62	56.571	Amphilophus_citrinellus
YAL025C	-	95	43.729	ENSAOCG00000018230	mak16	58	57.143	Amphiprion_ocellaris
YAL025C	-	57	57.386	ENSAPEG00000022237	mak16	58	57.386	Amphiprion_percula
YAL025C	-	96	45.763	ENSATEG00000012637	mak16	59	57.955	Anabas_testudineus
YAL025C	-	96	47.987	ENSACAG00000000888	MAK16	60	59.322	Anolis_carolinensis
YAL025C	-	96	47.525	ENSANAG00000030954	MAK16	58	57.062	Aotus_nancymaae
YAL025C	-	96	41.414	ENSACLG00000006342	mak16	78	46.502	Astatotilapia_calliptera
YAL025C	-	96	46.535	ENSAMXG00000033330	mak16	56	56.818	Astyanax_mexicanus
YAL025C	-	96	48.485	ENSBTAG00000033504	MAK16	81	51.012	Bos_taurus
YAL025C	-	72	45.909	WBGene00015811	C16A3.6	54	51.429	Caenorhabditis_elegans
YAL025C	-	96	47.855	ENSCJAG00000048459	MAK16	58	57.627	Callithrix_jacchus
YAL025C	-	96	46.823	ENSCAFG00000006325	MAK16	81	49.798	Canis_familiaris
YAL025C	-	96	46.284	ENSCAFG00020001324	MAK16	81	49.180	Canis_lupus_dingo
YAL025C	-	90	38.628	ENSCHIG00000014271	-	53	43.182	Capra_hircus
YAL025C	-	96	48.495	ENSCHIG00000017057	-	81	51.012	Capra_hircus
YAL025C	-	96	47.826	ENSTSYG00000028100	MAK16	81	50.202	Carlito_syrichta
YAL025C	-	96	46.309	ENSCCAG00000025382	MAK16	81	49.590	Cebus_capucinus
YAL025C	-	96	48.185	ENSCATG00000030566	MAK16	58	57.627	Cercocebus_atys
YAL025C	-	96	47.667	ENSCLAG00000002726	MAK16	59	57.627	Chinchilla_lanigera
YAL025C	-	89	47.794	ENSCHOG00000009081	MAK16	51	60.784	Choloepus_hoffmanni
YAL025C	-	96	47.195	ENSCPBG00000000176	MAK16	58	59.322	Chrysemys_picta_bellii
YAL025C	-	57	57.865	ENSCING00000007225	-	85	57.865	Ciona_intestinalis
YAL025C	-	96	44.595	ENSCSAVG00000005901	-	60	56.742	Ciona_savignyi
YAL025C	-	96	47.855	ENSCANG00000032211	MAK16	58	57.627	Colobus_angolensis_palliatus
YAL025C	-	96	47.841	ENSCGRG00001016542	Mak16	81	50.202	Cricetulus_griseus_chok1gshd
YAL025C	-	96	47.841	ENSCGRG00000007547	Mak16	81	50.202	Cricetulus_griseus_crigri
YAL025C	-	76	50.633	ENSCSEG00000010069	mak16	60	55.682	Cynoglossus_semilaevis
YAL025C	-	96	45.973	ENSCVAG00000017294	mak16	58	55.682	Cyprinodon_variegatus
YAL025C	-	96	48.161	ENSDARG00000003527	mak16	91	51.261	Danio_rerio
YAL025C	-	96	47.811	ENSDNOG00000008424	MAK16	59	58.757	Dasypus_novemcinctus
YAL025C	-	58	45.198	ENSDORG00000024387	-	63	46.328	Dipodomys_ordii
YAL025C	-	96	46.959	ENSDORG00000015722	-	58	56.571	Dipodomys_ordii
YAL025C	-	57	58.286	FBgn0030067	Rbm13	50	58.286	Drosophila_melanogaster
YAL025C	-	98	44.984	ENSEBUG00000011900	mak16	59	60.795	Eptatretus_burgeri
YAL025C	-	96	47.475	ENSEASG00005016762	MAK16	81	49.798	Equus_asinus_asinus
YAL025C	-	96	47.475	ENSECAG00000016532	MAK16	81	49.798	Equus_caballus
YAL025C	-	96	47.651	ENSEEUG00000006280	MAK16	81	51.230	Erinaceus_europaeus
YAL025C	-	96	48.322	ENSELUG00000008291	mak16	78	50.617	Esox_lucius
YAL025C	-	96	46.284	ENSFCAG00000033972	MAK16	81	48.770	Felis_catus
YAL025C	-	76	50.424	ENSFALG00000006827	MAK16	60	58.192	Ficedula_albicollis
YAL025C	-	96	47.651	ENSFDAG00000012817	MAK16	59	57.627	Fukomys_damarensis
YAL025C	-	95	45.424	ENSFHEG00000007084	mak16	58	56.818	Fundulus_heteroclitus
YAL025C	-	95	48.475	ENSGMOG00000000511	mak16	78	52.790	Gadus_morhua
YAL025C	-	76	49.153	ENSGALG00000001663	MAK16	60	58.192	Gallus_gallus
YAL025C	-	95	44.746	ENSGAFG00000015800	mak16	58	55.682	Gambusia_affinis
YAL025C	-	95	45.973	ENSGACG00000001081	mak16	59	56.818	Gasterosteus_aculeatus
YAL025C	-	96	47.508	ENSGAGG00000022177	MAK16	59	59.887	Gopherus_agassizii
YAL025C	-	96	48.505	ENSGGOG00000010487	MAK16	58	58.192	Gorilla_gorilla
YAL025C	-	57	52.273	ENSHBUG00000006023	mak16	57	52.273	Haplochromis_burtoni
YAL025C	-	96	47.351	ENSHGLG00000002981	MAK16	59	58.192	Heterocephalus_glaber_female
YAL025C	-	96	47.351	ENSHGLG00100007722	MAK16	59	58.192	Heterocephalus_glaber_male
YAL025C	-	99	39.286	ENSHCOG00000013162	mak16	53	57.237	Hippocampus_comes
YAL025C	-	96	47.368	ENSIPUG00000005863	mak16	56	58.523	Ictalurus_punctatus
YAL025C	-	64	53.535	ENSSTOG00000007812	MAK16	59	57.062	Ictidomys_tridecemlineatus
YAL025C	-	82	45.914	ENSJJAG00000000383	-	64	53.672	Jaculus_jaculus
YAL025C	-	96	41.137	ENSJJAG00000020605	-	55	46.893	Jaculus_jaculus
YAL025C	-	96	47.492	ENSJJAG00000015237	-	60	57.627	Jaculus_jaculus
YAL025C	-	95	45.085	ENSKMAG00000011338	mak16	58	55.682	Kryptolebias_marmoratus
YAL025C	-	57	57.386	ENSLBEG00000026813	mak16	57	57.386	Labrus_bergylta
YAL025C	-	96	49.495	ENSLACG00000018758	MAK16	57	60.795	Latimeria_chalumnae
YAL025C	-	76	52.321	ENSLOCG00000015135	mak16	56	57.955	Lepisosteus_oculatus
YAL025C	-	97	47.651	ENSLAFG00000026404	MAK16	78	49.787	Loxodonta_africana
YAL025C	-	96	47.855	ENSMFAG00000031257	MAK16	58	57.627	Macaca_fascicularis
YAL025C	-	96	47.855	ENSMMUG00000010244	MAK16	58	57.627	Macaca_mulatta
YAL025C	-	96	47.855	ENSMNEG00000035461	MAK16	58	57.627	Macaca_nemestrina
YAL025C	-	96	47.855	ENSMLEG00000028683	MAK16	59	57.627	Mandrillus_leucophaeus
YAL025C	-	57	56.818	ENSMAMG00000018478	mak16	93	45.833	Mastacembelus_armatus
YAL025C	-	96	44.631	ENSMZEG00005001916	mak16	57	57.386	Maylandia_zebra
YAL025C	-	81	46.988	ENSMGAG00000001635	MAK16	58	55.367	Meleagris_gallopavo
YAL025C	-	96	47.651	ENSMAUG00000008496	Mak16	81	50.820	Mesocricetus_auratus
YAL025C	-	96	47.826	ENSMICG00000013106	MAK16	58	57.062	Microcebus_murinus
YAL025C	-	58	57.062	ENSMOCG00000007445	Mak16	81	50.607	Microtus_ochrogaster
YAL025C	-	97	43.771	ENSMODG00000011096	MAK16	58	56.818	Monodelphis_domestica
YAL025C	-	57	52.247	ENSMALG00000003829	mak16	59	52.247	Monopterus_albus
YAL025C	-	96	46.179	MGP_CAROLIEiJ_G0030957	Mak16	59	57.627	Mus_caroli
YAL025C	-	96	47.297	ENSMUSG00000031578	Mak16	59	57.627	Mus_musculus
YAL025C	-	96	48.845	MGP_PahariEiJ_G0021426	Mak16	59	57.627	Mus_pahari
YAL025C	-	58	57.627	MGP_SPRETEiJ_G0032075	Mak16	59	57.627	Mus_spretus
YAL025C	-	77	50.000	ENSMPUG00000010181	MAK16	82	50.000	Mustela_putorius_furo
YAL025C	-	96	47.475	ENSMLUG00000002758	MAK16	59	56.497	Myotis_lucifugus
YAL025C	-	96	47.059	ENSNGAG00000008772	Mak16	82	50.202	Nannospalax_galili
YAL025C	-	96	47.525	ENSNLEG00000028118	MAK16	58	57.627	Nomascus_leucogenys
YAL025C	-	98	48.693	ENSMEUG00000006945	MAK16	59	58.192	Notamacropus_eugenii
YAL025C	-	58	50.282	ENSODEG00000000020	-	61	50.282	Octodon_degus
YAL025C	-	81	42.857	ENSODEG00000002030	-	88	42.339	Octodon_degus
YAL025C	-	96	49.164	ENSODEG00000005524	-	83	51.417	Octodon_degus
YAL025C	-	57	57.386	ENSONIG00000000560	mak16	58	57.386	Oreochromis_niloticus
YAL025C	-	58	59.322	ENSOANG00000002395	MAK16	64	59.322	Ornithorhynchus_anatinus
YAL025C	-	96	45.946	ENSOCUG00000008735	MAK16	59	57.062	Oryctolagus_cuniculus
YAL025C	-	96	44.631	ENSORLG00000019058	mak16	59	55.682	Oryzias_latipes
YAL025C	-	96	44.966	ENSORLG00015007275	mak16	59	56.250	Oryzias_latipes_hsok
YAL025C	-	96	45.118	ENSOMEG00000009317	mak16	58	56.250	Oryzias_melastigma
YAL025C	-	99	40.453	ENSOGAG00000024416	MAK16	59	52.542	Otolemur_garnettii
YAL025C	-	96	48.148	ENSOARG00000000384	MAK16	81	51.012	Ovis_aries
YAL025C	-	96	48.173	ENSPPAG00000035102	MAK16	58	57.627	Pan_paniscus
YAL025C	-	96	46.309	ENSPPRG00000002317	MAK16	81	48.770	Panthera_pardus
YAL025C	-	96	46.309	ENSPTIG00000014223	MAK16	81	48.770	Panthera_tigris_altaica
YAL025C	-	96	47.841	ENSPTRG00000020149	MAK16	58	57.627	Pan_troglodytes
YAL025C	-	96	47.078	ENSPANG00000010420	MAK16	59	56.044	Papio_anubis
YAL025C	-	97	47.855	ENSPKIG00000002082	mak16	57	59.659	Paramormyrops_kingsleyae
YAL025C	-	96	41.290	ENSPSIG00000012396	MAK16	59	49.727	Pelodiscus_sinensis
YAL025C	-	96	42.671	ENSPMGG00000004162	mak16	53	52.542	Periophthalmus_magnuspinnatus
YAL025C	-	96	47.315	ENSPEMG00000015171	Mak16	81	50.820	Peromyscus_maniculatus_bairdii
YAL025C	-	98	46.885	ENSPCIG00000028005	MAK16	82	49.798	Phascolarctos_cinereus
YAL025C	-	95	45.424	ENSPFOG00000001068	mak16	58	55.682	Poecilia_formosa
YAL025C	-	95	45.085	ENSPLAG00000022551	mak16	62	55.429	Poecilia_latipinna
YAL025C	-	95	45.424	ENSPMEG00000006460	mak16	61	55.429	Poecilia_mexicana
YAL025C	-	96	48.837	ENSPPYG00000018501	MAK16	58	57.627	Pongo_abelii
YAL025C	-	55	52.976	ENSPCOG00000018065	-	98	52.976	Propithecus_coquereli
YAL025C	-	96	43.919	ENSPVAG00000004692	MAK16	60	57.062	Pteropus_vampyrus
YAL025C	-	58	58.427	ENSPNAG00000014528	mak16	64	58.427	Pygocentrus_nattereri
YAL025C	-	58	56.497	ENSRNOG00000010783	Mak16	82	50.000	Rattus_norvegicus
YAL025C	-	96	46.865	ENSRBIG00000039940	MAK16	58	57.627	Rhinopithecus_bieti
YAL025C	-	96	46.865	ENSRROG00000032196	MAK16	58	57.627	Rhinopithecus_roxellana
YAL025C	-	96	47.000	ENSSBOG00000030325	MAK16	58	57.062	Saimiri_boliviensis_boliviensis
YAL025C	-	58	58.757	ENSSHAG00000007593	MAK16	58	58.757	Sarcophilus_harrisii
YAL025C	-	85	46.947	ENSSFOG00015019462	-	53	60.993	Scleropages_formosus
YAL025C	-	96	47.811	ENSSFOG00015019447	mak16	58	59.659	Scleropages_formosus
YAL025C	-	57	57.955	ENSSMAG00000018432	mak16	58	57.955	Scophthalmus_maximus
YAL025C	-	57	57.955	ENSSDUG00000013093	mak16	56	57.955	Seriola_dumerili
YAL025C	-	57	57.714	ENSSLDG00000002408	mak16	57	57.714	Seriola_lalandi_dorsalis
YAL025C	-	77	45.339	ENSSARG00000009574	MAK16	76	48.315	Sorex_araneus
YAL025C	-	97	46.488	ENSSPUG00000008956	MAK16	60	58.192	Sphenodon_punctatus
YAL025C	-	95	41.980	ENSSPAG00000005102	mak16	79	49.383	Stegastes_partitus
YAL025C	-	96	47.315	ENSSSCG00000036947	MAK16	81	50.410	Sus_scrofa
YAL025C	-	58	41.243	ENSSSCG00000032618	-	61	41.243	Sus_scrofa
YAL025C	-	51	52.564	ENSTGUG00000017303	MAK16	53	52.564	Taeniopygia_guttata
YAL025C	-	57	57.386	ENSTRUG00000011544	mak16	59	57.386	Takifugu_rubripes
YAL025C	-	89	36.462	ENSTBEG00000001861	MAK16	54	44.444	Tupaia_belangeri
YAL025C	-	96	46.959	ENSTTRG00000013015	MAK16	81	49.590	Tursiops_truncatus
YAL025C	-	96	45.608	ENSUAMG00000026894	MAK16	81	49.590	Ursus_americanus
YAL025C	-	96	45.608	ENSUMAG00000021133	MAK16	81	49.590	Ursus_maritimus
YAL025C	-	96	42.333	ENSVPAG00000006017	MAK16	50	56.376	Vicugna_pacos
YAL025C	-	96	46.309	ENSVVUG00000019933	MAK16	81	49.180	Vulpes_vulpes
YAL025C	-	97	48.667	ENSXETG00000016495	mak16	80	51.029	Xenopus_tropicalis
YAL025C	-	95	41.077	ENSXCOG00000012528	mak16	57	49.438	Xiphophorus_couchianus
YAL025C	-	95	45.085	ENSXMAG00000029335	mak16	58	56.250	Xiphophorus_maculatus