EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
YBR025C (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Saccharomyces_cerevisiae
Status
confidence
Strand
Minus strand
Length
1185
Position
chrII:290681-291865
Accession
S000000229
RBP type
canonical RBP
Summary
P-loop ATPase with similarity to human OLA1 and bacterial YchF%3B identified as specifically interacting with the proteasome%3B null mutant displays increased translation rate and increased readthrough of premature stop codons%3B protein abundance increases in response to hydrogen peroxide and to DNA replication stress
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
YBR025C_mRNAMMR_HSR1PF01926.233e-1711
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
26632259The RNA-binding proteomes from yeast to man harbour conserved enigmRBPsRIC.PAR_CL & yeast2015 Dec 3Beckmann BMDOI: 10.1038/ncomms10127
26595419Conserved mRNA-binding proteomes in eukaryotic organismsmRBPome & yeast2015 Nov 23Matia Gonzalez AMDOI: 10.1038/nsmb.3128
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
YBR025C_mRNA-1185-YBR025C_mRNA394 (aa)-P38219
Gene Model
Click here to download YBR025C's gene model file
Protein-Protein Interaction (PPI)

Clik here to download YBR025C's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
YBR025C-9746.851YHL014CYLF29846.851
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
YBR025C-9853.827ENSG00000138430OLA110058.475Homo_sapiens
YBR025C-9853.964ENSAPOG00000023705ola19753.964Acanthochromis_polyacanthus
YBR025C-9952.538ENSAPOG00000015861OLA19852.538Acanthochromis_polyacanthus
YBR025C-6251.613ENSAMEG00000012204OLA19251.613Ailuropoda_melanoleuca
YBR025C-9454.813ENSACIG00000000692OLA19854.813Amphilophus_citrinellus
YBR025C-9847.826ENSACIG00000016766ola19747.826Amphilophus_citrinellus
YBR025C-9853.046ENSAOCG00000012625OLA19753.046Amphiprion_ocellaris
YBR025C-9854.476ENSAOCG00000019135ola19754.476Amphiprion_ocellaris
YBR025C-9854.476ENSAPEG00000014283ola19754.476Amphiprion_percula
YBR025C-9952.645ENSAPEG00000022047OLA19852.645Amphiprion_percula
YBR025C-9853.964ENSATEG00000009394ola19753.964Anabas_testudineus
YBR025C-9454.447ENSATEG00000015763OLA19754.447Anabas_testudineus
YBR025C-9053.911ENSAPLG00000008147OLA19753.911Anas_platyrhynchos
YBR025C-9854.082ENSACAG00000017018OLA19754.082Anolis_carolinensis
YBR025C-9853.571ENSANAG00000029072-9353.571Aotus_nancymaae
YBR025C-9443.272ENSANAG00000023787-9343.272Aotus_nancymaae
YBR025C-9853.708ENSACLG00000011067ola19753.708Astatotilapia_calliptera
YBR025C-9654.331ENSACLG00000009505OLA19554.331Astatotilapia_calliptera
YBR025C-9854.337ENSAMXG00000004913ola19754.337Astyanax_mexicanus
YBR025C-9854.337ENSBTAG00000006970OLA19754.337Bos_taurus
YBR025C-9951.145WBGene00012344ola-19851.145Caenorhabditis_elegans
YBR025C-6949.097ENSCJAG00000046788-8249.097Callithrix_jacchus
YBR025C-9853.827ENSCJAG00000007877OLA19353.827Callithrix_jacchus
YBR025C-9853.165ENSCAFG00000013178OLA19753.165Canis_familiaris
YBR025C-9854.337ENSCHIG00000024019OLA19654.337Capra_hircus
YBR025C-9853.827ENSTSYG00000005517-9753.827Carlito_syrichta
YBR025C-9853.827ENSCPOG00000031110OLA19753.827Cavia_porcellus
YBR025C-6448.627ENSCCAG00000030871-9453.175Cebus_capucinus
YBR025C-9850.765ENSCCAG00000022561-9950.378Cebus_capucinus
YBR025C-9853.827ENSCCAG00000017844-9753.827Cebus_capucinus
YBR025C-9853.827ENSCATG00000040710-9353.827Cercocebus_atys
YBR025C-9853.827ENSCATG00000038920-9353.827Cercocebus_atys
YBR025C-9853.827ENSCLAG00000008657OLA19753.827Chinchilla_lanigera
YBR025C-6251.613ENSCSAG00000014670OLA19251.613Chlorocebus_sabaeus
YBR025C-6959.016ENSCHOG00000005044OLA17559.016Choloepus_hoffmanni
YBR025C-9852.672ENSCPBG00000003917OLA19652.672Chrysemys_picta_bellii
YBR025C-9652.742ENSCING00000006759-9752.778Ciona_intestinalis
YBR025C-9852.525ENSCSAVG00000006512-9852.525Ciona_savignyi
YBR025C-9541.223ENSCANG00000029540-8341.223Colobus_angolensis_palliatus
YBR025C-9053.631ENSCANG00000039286-9253.631Colobus_angolensis_palliatus
YBR025C-9853.827ENSCGRG00001001469Ola19753.827Cricetulus_griseus_chok1gshd
YBR025C-9853.827ENSCGRG00000017472Ola19753.827Cricetulus_griseus_crigri
YBR025C-9854.569ENSCSEG00000005434ola19754.569Cynoglossus_semilaevis
YBR025C-9653.543ENSCSEG00000005504OLA17352.368Cynoglossus_semilaevis
YBR025C-9854.220ENSCVAG00000003966ola19754.220Cyprinodon_variegatus
YBR025C-9653.543ENSCVAG00000018673OLA19553.543Cyprinodon_variegatus
YBR025C-9852.806ENSDARG00000044565ola19853.360Danio_rerio
YBR025C-9854.082ENSDNOG00000010630OLA19754.082Dasypus_novemcinctus
YBR025C-9853.571ENSDORG00000008681-9753.571Dipodomys_ordii
YBR025C-9545.036ENSDORG00000024064-9544.928Dipodomys_ordii
YBR025C-9951.646FBgn0030151CG13549851.646Drosophila_melanogaster
YBR025C-6252.419ENSETEG00000012453OLA16152.419Echinops_telfairi
YBR025C-9851.918ENSEBUG00000006035ola19751.918Eptatretus_burgeri
YBR025C-9353.117ENSEASG00005022603OLA18853.117Equus_asinus_asinus
YBR025C-9853.827ENSECAG00000016353OLA19753.827Equus_caballus
YBR025C-9047.207ENSEEUG00000015203OLA19747.207Erinaceus_europaeus
YBR025C-9846.329ENSELUG00000010548ola19746.329Esox_lucius
YBR025C-9351.622ENSELUG00000022548OLA18951.622Esox_lucius
YBR025C-9853.827ENSFCAG00000036661-9753.827Felis_catus
YBR025C-9046.927ENSFCAG00000022771-7746.927Felis_catus
YBR025C-9853.827ENSFALG00000002944OLA19753.827Ficedula_albicollis
YBR025C-9853.571ENSFDAG00000011277OLA19753.571Fukomys_damarensis
YBR025C-9953.149ENSFHEG00000000700OLA19853.149Fundulus_heteroclitus
YBR025C-9853.708ENSFHEG00000009030ola19753.708Fundulus_heteroclitus
YBR025C-9852.430ENSGMOG00000000608ola19852.430Gadus_morhua
YBR025C-9853.571ENSGALG00000009325OLA19753.571Gallus_gallus
YBR025C-9854.476ENSGAFG00000019733ola19754.476Gambusia_affinis
YBR025C-9946.835ENSGAFG00000003776OLA19846.835Gambusia_affinis
YBR025C-9853.453ENSGACG00000010083ola19753.453Gasterosteus_aculeatus
YBR025C-9853.827ENSGGOG00000022215OLA19753.827Gorilla_gorilla
YBR025C-9654.068ENSHBUG00000019432OLA19454.068Haplochromis_burtoni
YBR025C-9853.708ENSHBUG00000006078ola19753.708Haplochromis_burtoni
YBR025C-9838.346ENSHGLG00000007643-9738.346Heterocephalus_glaber_female
YBR025C-9848.111ENSHGLG00000012199-9748.111Heterocephalus_glaber_female
YBR025C-9847.436ENSHGLG00000003777-9747.436Heterocephalus_glaber_female
YBR025C-9854.082ENSHGLG00000006618-9754.082Heterocephalus_glaber_female
YBR025C-9848.111ENSHGLG00100009225-9748.111Heterocephalus_glaber_male
YBR025C-9838.346ENSHGLG00100008457-9738.346Heterocephalus_glaber_male
YBR025C-9853.453ENSHCOG00000020085ola19753.453Hippocampus_comes
YBR025C-9854.337ENSIPUG00000019139ola19754.337Ictalurus_punctatus
YBR025C-9853.827ENSSTOG00000015547OLA19753.827Ictidomys_tridecemlineatus
YBR025C-9543.617ENSJJAG00000018538-9443.617Jaculus_jaculus
YBR025C-9853.827ENSJJAG00000022958-9753.827Jaculus_jaculus
YBR025C-9854.220ENSKMAG00000012576ola19754.220Kryptolebias_marmoratus
YBR025C-9952.645ENSKMAG00000015578OLA19852.645Kryptolebias_marmoratus
YBR025C-9654.068ENSLBEG00000016137OLA19853.316Labrus_bergylta
YBR025C-9853.571ENSLBEG00000018929ola19753.571Labrus_bergylta
YBR025C-9853.316ENSLACG00000007258OLA19753.316Latimeria_chalumnae
YBR025C-9854.847ENSLOCG00000007399ola19654.847Lepisosteus_oculatus
YBR025C-9853.827ENSLAFG00000002706OLA19753.827Loxodonta_africana
YBR025C-9853.827ENSMFAG00000044124OLA19753.827Macaca_fascicularis
YBR025C-9853.827ENSMMUG00000007092OLA19353.827Macaca_mulatta
YBR025C-9853.827ENSMNEG00000040767OLA19753.827Macaca_nemestrina
YBR025C-9853.827ENSMLEG00000040175OLA19353.827Mandrillus_leucophaeus
YBR025C-9847.570ENSMAMG00000003717ola19747.570Mastacembelus_armatus
YBR025C-9654.068ENSMAMG00000005934OLA19454.068Mastacembelus_armatus
YBR025C-9853.708ENSMZEG00005001203ola19753.708Maylandia_zebra
YBR025C-9654.450ENSMZEG00005005008OLA19454.450Maylandia_zebra
YBR025C-9549.869ENSMGAG00000009826OLA19853.221Meleagris_gallopavo
YBR025C-9853.827ENSMAUG00000019168Ola19753.827Mesocricetus_auratus
YBR025C-9853.827ENSMICG00000000354OLA19753.827Microcebus_murinus
YBR025C-9849.490ENSMOCG00000011603-9749.490Microtus_ochrogaster
YBR025C-9853.316ENSMOCG00000003125-9753.316Microtus_ochrogaster
YBR025C-9947.208ENSMMOG00000001661OLA19847.208Mola_mola
YBR025C-9847.059ENSMMOG00000008941ola19747.059Mola_mola
YBR025C-9851.020ENSMODG00000009296OLA19751.020Monodelphis_domestica
YBR025C-9853.708ENSMALG00000017692ola19747.059Monopterus_albus
YBR025C-9654.331ENSMALG00000009196OLA19448.294Monopterus_albus
YBR025C-9853.827MGP_CAROLIEiJ_G0023655Ola19753.827Mus_caroli
YBR025C-9853.827ENSMUSG00000027108Ola19753.827Mus_musculus
YBR025C-9853.827MGP_PahariEiJ_G0025107Ola19753.827Mus_pahari
YBR025C-9853.827MGP_SPRETEiJ_G0024578Ola19753.827Mus_spretus
YBR025C-9853.827ENSMPUG00000013906OLA19753.827Mustela_putorius_furo
YBR025C-9541.361ENSNGAG00000017257-9241.361Nannospalax_galili
YBR025C-9853.827ENSNGAG00000017639Ola19753.827Nannospalax_galili
YBR025C-9846.803ENSNBRG00000022738ola19746.803Neolamprologus_brichardi
YBR025C-9553.600ENSNBRG00000011698OLA19853.600Neolamprologus_brichardi
YBR025C-9851.531ENSNLEG00000015824-9751.531Nomascus_leucogenys
YBR025C-9854.082ENSNLEG00000005817OLA19354.082Nomascus_leucogenys
YBR025C-9846.803ENSMEUG00000009973OLA19746.803Notamacropus_eugenii
YBR025C-7556.667ENSOPRG00000005569OLA18156.667Ochotona_princeps
YBR025C-9853.827ENSODEG00000009011OLA19753.827Octodon_degus
YBR025C-9853.708ENSONIG00000001265ola19753.708Oreochromis_niloticus
YBR025C-9654.331ENSONIG00000008658OLA19454.331Oreochromis_niloticus
YBR025C-9854.592ENSOANG00000008601OLA19754.592Ornithorhynchus_anatinus
YBR025C-9853.827ENSOCUG00000003574OLA19753.827Oryctolagus_cuniculus
YBR025C-9847.570ENSORLG00000013788ola19747.570Oryzias_latipes
YBR025C-9654.068ENSORLG00000017489OLA19554.068Oryzias_latipes
YBR025C-9847.570ENSORLG00020015238ola19747.570Oryzias_latipes_hni
YBR025C-9654.068ENSORLG00020021173OLA19554.068Oryzias_latipes_hni
YBR025C-9352.973ENSORLG00015013782ola19452.973Oryzias_latipes_hsok
YBR025C-9654.068ENSORLG00015015230OLA19554.068Oryzias_latipes_hsok
YBR025C-9854.220ENSOMEG00000012796ola19754.220Oryzias_melastigma
YBR025C-9654.068ENSOMEG00000004469OLA19853.250Oryzias_melastigma
YBR025C-9853.827ENSOGAG00000016557OLA19753.827Otolemur_garnettii
YBR025C-9854.337ENSOARG00000000451-9354.337Ovis_aries
YBR025C-7452.041ENSOARG00000000967-9952.041Ovis_aries
YBR025C-9853.571ENSPPAG00000035004OLA19753.571Pan_paniscus
YBR025C-9747.804ENSPPAG00000037463-9947.804Pan_paniscus
YBR025C-9549.206ENSPPRG00000003845-9249.206Panthera_pardus
YBR025C-9853.827ENSPPRG00000004233-9753.827Panthera_pardus
YBR025C-9853.827ENSPTIG00000011872-9753.827Panthera_tigris_altaica
YBR025C-9549.471ENSPTIG00000021823-9249.471Panthera_tigris_altaica
YBR025C-9853.827ENSPTRG00000012650OLA19753.827Pan_troglodytes
YBR025C-9747.545ENSPTRG00000048207-9947.545Pan_troglodytes
YBR025C-9853.827ENSPANG00000020854OLA19353.827Papio_anubis
YBR025C-9853.571ENSPKIG00000004546OLA19753.571Paramormyrops_kingsleyae
YBR025C-9853.316ENSPSIG00000017495OLA19753.316Pelodiscus_sinensis
YBR025C-9653.806ENSPMGG00000000277OLA19453.806Periophthalmus_magnuspinnatus
YBR025C-9552.646ENSPMGG00000001339ola19752.174Periophthalmus_magnuspinnatus
YBR025C-9853.827ENSPEMG00000021970Ola19753.827Peromyscus_maniculatus_bairdii
YBR025C-9854.476ENSPFOG00000016213ola19754.476Poecilia_formosa
YBR025C-9854.476ENSPLAG00000016640ola19754.476Poecilia_latipinna
YBR025C-9654.712ENSPLAG00000017971OLA19554.712Poecilia_latipinna
YBR025C-9654.450ENSPMEG00000002033OLA19554.450Poecilia_mexicana
YBR025C-9854.476ENSPMEG00000015915ola19754.476Poecilia_mexicana
YBR025C-9848.082ENSPREG00000005840ola19748.082Poecilia_reticulata
YBR025C-9554.521ENSPREG00000005171OLA19854.521Poecilia_reticulata
YBR025C-9853.571ENSPPYG00000012943OLA19753.571Pongo_abelii
YBR025C-9841.327ENSPCOG00000022010-8549.606Propithecus_coquereli
YBR025C-9853.827ENSPCOG00000017353-9753.827Propithecus_coquereli
YBR025C-9050.838ENSPVAG00000000982OLA19750.838Pteropus_vampyrus
YBR025C-9853.708ENSPNYG00000014943ola19753.708Pundamilia_nyererei
YBR025C-9654.068ENSPNYG00000007912OLA19554.068Pundamilia_nyererei
YBR025C-9452.533ENSPNAG00000012638ola19747.704Pygocentrus_nattereri
YBR025C-9853.061ENSRNOG00000019047Ola19753.061Rattus_norvegicus
YBR025C-9851.493ENSRBIG00000006151OLA19851.493Rhinopithecus_bieti
YBR025C-6139.918ENSRBIG00000013930-9848.819Rhinopithecus_bieti
YBR025C-5947.257ENSRBIG00000018330-9353.543Rhinopithecus_bieti
YBR025C-9540.849ENSRROG00000032626-7957.143Rhinopithecus_roxellana
YBR025C-9853.827ENSRROG00000038551OLA19753.827Rhinopithecus_roxellana
YBR025C-9845.153ENSSBOG00000031656-8653.279Saimiri_boliviensis_boliviensis
YBR025C-9853.316ENSSBOG00000002999OLA19753.316Saimiri_boliviensis_boliviensis
YBR025C-9854.847ENSSHAG00000014637OLA19754.847Sarcophilus_harrisii
YBR025C-9954.430ENSSFOG00015018477ola19854.430Scleropages_formosus
YBR025C-9854.569ENSSMAG00000017661ola19754.569Scophthalmus_maximus
YBR025C-9952.538ENSSMAG00000014909OLA19852.538Scophthalmus_maximus
YBR025C-9455.228ENSSDUG00000021482OLA19655.228Seriola_dumerili
YBR025C-9854.569ENSSDUG00000013714ola19754.569Seriola_dumerili
YBR025C-9854.569ENSSLDG00000014654ola19754.569Seriola_lalandi_dorsalis
YBR025C-9554.762ENSSLDG00000018580OLA19354.762Seriola_lalandi_dorsalis
YBR025C-9854.082ENSSARG00000010743OLA19754.082Sorex_araneus
YBR025C-9854.337ENSSPUG00000002409OLA19754.337Sphenodon_punctatus
YBR025C-9854.987ENSSPAG00000021138ola19754.987Stegastes_partitus
YBR025C-9654.068ENSSPAG00000000415OLA19554.068Stegastes_partitus
YBR025C-9853.964ENSSSCG00000015963OLA19753.964Sus_scrofa
YBR025C-9853.827ENSTGUG00000008710-9753.827Taeniopygia_guttata
YBR025C-7854.662ENSTRUG00000017614OLA19454.662Takifugu_rubripes
YBR025C-9853.964ENSTRUG00000015215ola19753.964Takifugu_rubripes
YBR025C-7652.824ENSTNIG00000017209ola19952.824Tetraodon_nigroviridis
YBR025C-8542.388ENSTBEG00000007574OLA110042.388Tupaia_belangeri
YBR025C-9853.061ENSTTRG00000016999OLA19753.061Tursiops_truncatus
YBR025C-9853.827ENSUMAG00000015410OLA19353.827Ursus_maritimus
YBR025C-9849.745ENSVPAG00000009660OLA19749.745Vicugna_pacos
YBR025C-7451.361ENSVVUG00000014108-9451.361Vulpes_vulpes
YBR025C-9853.827ENSVVUG00000012991-9553.827Vulpes_vulpes
YBR025C-9853.571ENSXETG00000008500ola19753.571Xenopus_tropicalis
YBR025C-9948.485ENSXCOG00000019180OLA19848.485Xiphophorus_couchianus
YBR025C-9847.826ENSXCOG00000014121ola19747.826Xiphophorus_couchianus
YBR025C-9854.476ENSXMAG00000009840ola19754.476Xiphophorus_maculatus
YBR025C-9654.712ENSXMAG00000005330OLA19454.712Xiphophorus_maculatus

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