EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
YBR048W (Gene tree)
Gene ID
-
Gene Symbol
RPS11B
Alias
-
Full Name
Protein component of the small (40S) ribosomal subunit%3B homologous to mammalian ribosomal protein S11 and bacterial S17%3B RPS11B has a paralog%2C RPS11A%2C that arose from the whole genome duplication
Gene Type
protein_coding
Species
Saccharomyces_cerevisiae
Status
confidence
Strand
Plus strand
Length
982 bases
Position
chrII:332831-333812
Accession
S000000252
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
YBR048W_mRNARibosomal_S17PF00366.208.6e-2811
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
25173706Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteinsRNPxl & yeast2014 Aug 31Kramer KDOI: 10.1038/nmeth.3092
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
YBR048W_mRNA-471-YBR048W_mRNA156 (aa)-P0CX47
Gene Model
Click here to download YBR048W's gene model file
Protein-Protein Interaction (PPI)

Clik here to download YBR048W's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
YBR048WRPS11B100100.000YDR025WRPS11A100100.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
YBR048WRPS11B9669.872ENSG00000142534RPS119975.949Homo_sapiens
YBR048WRPS11B9665.823ENSAPOG00000001274si:dkey-159f12.29865.823Acanthochromis_polyacanthus
YBR048WRPS11B9669.872ENSAMEG00000014020RPS119869.872Ailuropoda_melanoleuca
YBR048WRPS11B7947.200ENSAMEG00000009499-7747.200Ailuropoda_melanoleuca
YBR048WRPS11B9667.089ENSACIG00000012316si:dkey-159f12.29867.089Amphilophus_citrinellus
YBR048WRPS11B9665.823ENSAOCG00000001295si:dkey-159f12.29865.823Amphiprion_ocellaris
YBR048WRPS11B9665.823ENSAPEG00000016683si:dkey-159f12.29865.823Amphiprion_percula
YBR048WRPS11B9665.823ENSATEG00000003330si:dkey-159f12.29865.823Anabas_testudineus
YBR048WRPS11B9658.333ENSAPLG00000010997RPS119758.333Anas_platyrhynchos
YBR048WRPS11B9669.032ENSACAG00000003051RPS1110069.032Anolis_carolinensis
YBR048WRPS11B9669.231ENSANAG00000015519-9869.231Aotus_nancymaae
YBR048WRPS11B9065.068ENSANAG00000023193-9265.068Aotus_nancymaae
YBR048WRPS11B9669.872ENSANAG00000022898RPS119869.872Aotus_nancymaae
YBR048WRPS11B7659.055ENSACLG00000004309si:dkey-159f12.26659.055Astatotilapia_calliptera
YBR048WRPS11B9665.605ENSAMXG00000042366si:dkey-159f12.29265.605Astyanax_mexicanus
YBR048WRPS11B9669.872ENSBTAG00000013924RPS119869.872Bos_taurus
YBR048WRPS11B9760.256WBGene00004480rps-1110060.256Caenorhabditis_elegans
YBR048WRPS11B9666.667ENSCJAG00000013251-9866.667Callithrix_jacchus
YBR048WRPS11B9669.872ENSCJAG00000000069RPS119869.872Callithrix_jacchus
YBR048WRPS11B9667.949ENSCAFG00000018740-9867.949Canis_familiaris
YBR048WRPS11B9669.872ENSCAFG00000003631RPS119869.872Canis_familiaris
YBR048WRPS11B5650.562ENSCAFG00020001440-7750.562Canis_lupus_dingo
YBR048WRPS11B9669.872ENSCAFG00020024909RPS119869.872Canis_lupus_dingo
YBR048WRPS11B9669.872ENSCHIG00000027213RPS119869.872Capra_hircus
YBR048WRPS11B9669.872ENSCHIG00000010925-9869.872Capra_hircus
YBR048WRPS11B8863.194ENSTSYG00000025859-9363.194Carlito_syrichta
YBR048WRPS11B9669.872ENSTSYG00000035050RPS119869.872Carlito_syrichta
YBR048WRPS11B9669.872ENSCPOG00000015145RPS119869.872Cavia_porcellus
YBR048WRPS11B9065.753ENSCCAG00000029237-9965.753Cebus_capucinus
YBR048WRPS11B9669.872ENSCCAG00000037559RPS119869.872Cebus_capucinus
YBR048WRPS11B9750.318ENSCCAG00000026616-6150.318Cebus_capucinus
YBR048WRPS11B7871.545ENSCATG00000039064-8571.545Cercocebus_atys
YBR048WRPS11B9666.452ENSCATG00000016163-9866.452Cercocebus_atys
YBR048WRPS11B9669.872ENSCATG00000017632RPS119869.872Cercocebus_atys
YBR048WRPS11B9053.020ENSCLAG00000000058-9653.020Chinchilla_lanigera
YBR048WRPS11B9669.872ENSCLAG00000011518-9869.872Chinchilla_lanigera
YBR048WRPS11B9669.872ENSCSAG00000002534-9869.872Chlorocebus_sabaeus
YBR048WRPS11B9666.667ENSCSAG00000016818-7966.667Chlorocebus_sabaeus
YBR048WRPS11B9668.590ENSCSAG00000000387-9868.590Chlorocebus_sabaeus
YBR048WRPS11B9665.161ENSCPBG00000022580-9765.161Chrysemys_picta_bellii
YBR048WRPS11B9669.032ENSCPBG00000002937-9769.032Chrysemys_picta_bellii
YBR048WRPS11B9762.987ENSCING00000005250-9862.987Ciona_intestinalis
YBR048WRPS11B9664.474ENSCSAVG00000009697-10064.474Ciona_savignyi
YBR048WRPS11B9064.828ENSCANG00000030802-9764.828Colobus_angolensis_palliatus
YBR048WRPS11B7969.355ENSCANG00000040073-8669.355Colobus_angolensis_palliatus
YBR048WRPS11B9669.872ENSCANG00000040567-9869.872Colobus_angolensis_palliatus
YBR048WRPS11B9669.872ENSCGRG00001023575-9869.872Cricetulus_griseus_chok1gshd
YBR048WRPS11B9663.462ENSCGRG00001010027-9863.462Cricetulus_griseus_chok1gshd
YBR048WRPS11B9669.872ENSCGRG00000017803Rps119869.872Cricetulus_griseus_crigri
YBR048WRPS11B9663.462ENSCGRG00000019265-9863.462Cricetulus_griseus_crigri
YBR048WRPS11B9665.823ENSCSEG00000021271si:dkey-159f12.29865.823Cynoglossus_semilaevis
YBR048WRPS11B9668.354ENSCVAG00000013528si:dkey-159f12.29868.354Cyprinodon_variegatus
YBR048WRPS11B9668.590ENSDARG00000053058rps119768.590Danio_rerio
YBR048WRPS11B9062.585ENSDARG00000093606si:dkey-159f12.29162.585Danio_rerio
YBR048WRPS11B8969.655ENSDNOG00000045185-9269.655Dasypus_novemcinctus
YBR048WRPS11B9752.941ENSDORG00000023626-8352.941Dipodomys_ordii
YBR048WRPS11B9669.872ENSDORG00000012195-9869.872Dipodomys_ordii
YBR048WRPS11B9760.897FBgn0033699RpS1110060.897Drosophila_melanogaster
YBR048WRPS11B9668.590ENSETEG00000019860-9868.590Echinops_telfairi
YBR048WRPS11B9659.615ENSETEG00000011214-9859.615Echinops_telfairi
YBR048WRPS11B7068.421ENSETEG00000017080-9768.421Echinops_telfairi
YBR048WRPS11B9665.806ENSEBUG00000005926si:dkey-159f12.29465.806Eptatretus_burgeri
YBR048WRPS11B9669.872ENSEASG00005005014RPS119869.872Equus_asinus_asinus
YBR048WRPS11B9069.863ENSECAG00000000370RPS119969.863Equus_caballus
YBR048WRPS11B6967.857ENSEEUG00000003392RPS1110067.857Erinaceus_europaeus
YBR048WRPS11B9669.231ENSELUG00000020082rps119869.231Esox_lucius
YBR048WRPS11B9669.872ENSFCAG00000009196RPS119869.872Felis_catus
YBR048WRPS11B7762.016ENSFCAG00000024200-9862.016Felis_catus
YBR048WRPS11B9668.387ENSFALG00000008087RPS119768.387Ficedula_albicollis
YBR048WRPS11B9669.872ENSFDAG00000006671RPS119869.872Fukomys_damarensis
YBR048WRPS11B9667.925ENSGMOG00000005159si:dkey-159f12.29867.925Gadus_morhua
YBR048WRPS11B9669.032ENSGALG00000017299RPS119769.032Gallus_gallus
YBR048WRPS11B9667.722ENSGAFG00000018113si:dkey-159f12.29867.722Gambusia_affinis
YBR048WRPS11B9665.823ENSGACG00000014154si:dkey-159f12.210065.823Gasterosteus_aculeatus
YBR048WRPS11B9669.872ENSGGOG00000002936RPS119869.872Gorilla_gorilla
YBR048WRPS11B9765.217ENSHBUG00000000926si:dkey-159f12.29465.217Haplochromis_burtoni
YBR048WRPS11B9665.563ENSHGLG00000018524-9865.563Heterocephalus_glaber_female
YBR048WRPS11B9669.872ENSHGLG00000007019RPS119869.872Heterocephalus_glaber_female
YBR048WRPS11B9669.872ENSHGLG00100009320RPS119869.872Heterocephalus_glaber_male
YBR048WRPS11B9664.901ENSHGLG00100001716-9864.901Heterocephalus_glaber_male
YBR048WRPS11B9351.948ENSHCOG00000005673-9451.948Hippocampus_comes
YBR048WRPS11B9660.127ENSHCOG00000017533-9860.127Hippocampus_comes
YBR048WRPS11B9665.190ENSHCOG00000007107RPS119865.190Hippocampus_comes
YBR048WRPS11B9667.308ENSIPUG00000015554rps119767.308Ictalurus_punctatus
YBR048WRPS11B9669.872ENSSTOG00000023443RPS119869.872Ictidomys_tridecemlineatus
YBR048WRPS11B9669.872ENSJJAG00000021986Rps1110069.677Jaculus_jaculus
YBR048WRPS11B9051.020ENSJJAG00000003779-9951.020Jaculus_jaculus
YBR048WRPS11B7958.871ENSJJAG00000020662-8858.871Jaculus_jaculus
YBR048WRPS11B7958.871ENSJJAG00000016757-8058.871Jaculus_jaculus
YBR048WRPS11B9067.114ENSKMAG00000017959-8867.114Kryptolebias_marmoratus
YBR048WRPS11B9668.553ENSKMAG00000018535RPS117768.553Kryptolebias_marmoratus
YBR048WRPS11B7062.393ENSLBEG00000023436si:dkey-159f12.29657.364Labrus_bergylta
YBR048WRPS11B9669.872ENSLACG00000001903RPS119869.872Latimeria_chalumnae
YBR048WRPS11B9669.872ENSLAFG00000016217RPS119869.872Loxodonta_africana
YBR048WRPS11B7964.000ENSMFAG00000045798-8364.000Macaca_fascicularis
YBR048WRPS11B9665.385ENSMFAG00000007648-9865.385Macaca_fascicularis
YBR048WRPS11B9669.872ENSMFAG00000044574RPS119869.872Macaca_fascicularis
YBR048WRPS11B9665.161ENSMFAG00000024046-9865.161Macaca_fascicularis
YBR048WRPS11B9669.872ENSMMUG00000007549RPS119869.872Macaca_mulatta
YBR048WRPS11B9665.385ENSMMUG00000044284-9865.385Macaca_mulatta
YBR048WRPS11B9669.872ENSMNEG00000043643RPS119869.872Macaca_nemestrina
YBR048WRPS11B7963.200ENSMNEG00000021980-8363.200Macaca_nemestrina
YBR048WRPS11B9068.919ENSMLEG00000029083RPS118668.919Mandrillus_leucophaeus
YBR048WRPS11B9665.823ENSMAMG00000001705si:dkey-159f12.29865.823Mastacembelus_armatus
YBR048WRPS11B9666.456ENSMZEG00005022572si:dkey-159f12.29866.456Maylandia_zebra
YBR048WRPS11B9650.000ENSMAUG00000014867-9850.000Mesocricetus_auratus
YBR048WRPS11B9657.419ENSMAUG00000004149-9857.419Mesocricetus_auratus
YBR048WRPS11B9669.872ENSMAUG00000012416Rps119869.872Mesocricetus_auratus
YBR048WRPS11B9646.497ENSMAUG00000020979-9846.497Mesocricetus_auratus
YBR048WRPS11B9755.063ENSMAUG00000015369-9955.063Mesocricetus_auratus
YBR048WRPS11B9669.872ENSMICG00000028139-9869.872Microcebus_murinus
YBR048WRPS11B9658.974ENSMICG00000046094-9858.974Microcebus_murinus
YBR048WRPS11B9059.864ENSMOCG00000007822-8859.864Microtus_ochrogaster
YBR048WRPS11B9669.872ENSMOCG00000014469Rps119869.872Microtus_ochrogaster
YBR048WRPS11B7956.911ENSMOCG00000022199-8056.911Microtus_ochrogaster
YBR048WRPS11B9657.692ENSMOCG00000018600-9857.692Microtus_ochrogaster
YBR048WRPS11B6260.577ENSMMOG00000020449si:dkey-159f12.26160.577Mola_mola
YBR048WRPS11B9668.590ENSMODG00000013434RPS119868.590Monodelphis_domestica
YBR048WRPS11B9666.456ENSMALG00000004025si:dkey-159f12.29866.456Monopterus_albus
YBR048WRPS11B9669.872MGP_CAROLIEiJ_G0029697Rps119869.872Mus_caroli
YBR048WRPS11B9669.872ENSMUSG00000003429Rps119869.872Mus_musculus
YBR048WRPS11B9669.872MGP_PahariEiJ_G0012922Rps119869.872Mus_pahari
YBR048WRPS11B9669.872MGP_SPRETEiJ_G0030795Rps119869.872Mus_spretus
YBR048WRPS11B9669.872ENSMPUG00000002599RPS119869.872Mustela_putorius_furo
YBR048WRPS11B9668.590ENSMLUG00000030475RPS119868.590Myotis_lucifugus
YBR048WRPS11B9663.399ENSNGAG00000005691-9763.399Nannospalax_galili
YBR048WRPS11B9748.101ENSNGAG00000023096-9948.101Nannospalax_galili
YBR048WRPS11B9669.872ENSNGAG00000021376-9869.872Nannospalax_galili
YBR048WRPS11B9666.456ENSNBRG00000016251si:dkey-159f12.29866.456Neolamprologus_brichardi
YBR048WRPS11B9662.264ENSNLEG00000019081-9862.264Nomascus_leucogenys
YBR048WRPS11B9669.872ENSNLEG00000031159RPS119869.872Nomascus_leucogenys
YBR048WRPS11B9568.831ENSMEUG00000008649RPS1110068.831Notamacropus_eugenii
YBR048WRPS11B7965.323ENSODEG00000000728-8865.323Octodon_degus
YBR048WRPS11B9658.974ENSODEG00000020198-9858.974Octodon_degus
YBR048WRPS11B9666.026ENSODEG00000019969-9866.026Octodon_degus
YBR048WRPS11B9651.923ENSODEG00000001626-9851.923Octodon_degus
YBR048WRPS11B9669.872ENSODEG00000016970RPS119869.872Octodon_degus
YBR048WRPS11B9666.456ENSONIG00000001300si:dkey-159f12.29866.456Oreochromis_niloticus
YBR048WRPS11B7166.087ENSOANG00000000829RPS119766.087Ornithorhynchus_anatinus
YBR048WRPS11B9669.872ENSOCUG00000027435-9869.872Oryctolagus_cuniculus
YBR048WRPS11B9664.103ENSOCUG00000024241-9864.103Oryctolagus_cuniculus
YBR048WRPS11B9665.823ENSORLG00000004578si:dkey-159f12.29865.823Oryzias_latipes
YBR048WRPS11B9665.823ENSORLG00020006476si:dkey-159f12.29865.823Oryzias_latipes_hni
YBR048WRPS11B9665.823ENSORLG00015019645si:dkey-159f12.29865.823Oryzias_latipes_hsok
YBR048WRPS11B9665.823ENSOMEG00000024015si:dkey-159f12.29865.823Oryzias_melastigma
YBR048WRPS11B9669.872ENSOGAG00000004627-9869.872Otolemur_garnettii
YBR048WRPS11B9649.682ENSOGAG00000029908-9849.682Otolemur_garnettii
YBR048WRPS11B9242.177ENSOGAG00000000369-9442.177Otolemur_garnettii
YBR048WRPS11B9669.872ENSOARG00000013191RPS119869.872Ovis_aries
YBR048WRPS11B9669.872ENSPPAG00000038695RPS119869.872Pan_paniscus
YBR048WRPS11B9669.872ENSPPRG00000012091-9869.872Panthera_pardus
YBR048WRPS11B9668.590ENSPPRG00000016728-9868.590Panthera_pardus
YBR048WRPS11B9667.308ENSPPRG00000015202-9867.308Panthera_pardus
YBR048WRPS11B9669.872ENSPTIG00000002272RPS119869.872Panthera_tigris_altaica
YBR048WRPS11B9669.872ENSPTRG00000011299RPS119869.872Pan_troglodytes
YBR048WRPS11B9669.872ENSPANG00000012512-9869.872Papio_anubis
YBR048WRPS11B7971.200ENSPANG00000033626-8571.200Papio_anubis
YBR048WRPS11B8858.741ENSPANG00000031350-9458.741Papio_anubis
YBR048WRPS11B9666.452ENSPANG00000004547-9866.452Papio_anubis
YBR048WRPS11B9668.153ENSPKIG00000019942si:dkey-159f12.29868.153Paramormyrops_kingsleyae
YBR048WRPS11B9469.281ENSPSIG00000011089-7369.281Pelodiscus_sinensis
YBR048WRPS11B9667.722ENSPMGG00000000774si:dkey-159f12.29867.722Periophthalmus_magnuspinnatus
YBR048WRPS11B9669.872ENSPEMG00000015976Rps119869.872Peromyscus_maniculatus_bairdii
YBR048WRPS11B5061.538ENSPEMG00000013353-9961.538Peromyscus_maniculatus_bairdii
YBR048WRPS11B9669.872ENSPMAG00000008190si:dkey-159f12.29869.872Petromyzon_marinus
YBR048WRPS11B9668.590ENSPCIG00000007352RPS119868.590Phascolarctos_cinereus
YBR048WRPS11B9667.722ENSPFOG00000014915si:dkey-159f12.29767.722Poecilia_formosa
YBR048WRPS11B9667.722ENSPLAG00000012541si:dkey-159f12.29167.722Poecilia_latipinna
YBR048WRPS11B9667.722ENSPMEG00000023949si:dkey-159f12.29167.722Poecilia_mexicana
YBR048WRPS11B9667.722ENSPREG00000014643si:dkey-159f12.29167.722Poecilia_reticulata
YBR048WRPS11B7168.696ENSPPYG00000025860-9768.696Pongo_abelii
YBR048WRPS11B8868.531ENSPCAG00000004146RPS119868.531Procavia_capensis
YBR048WRPS11B9669.872ENSPCOG00000028258RPS119869.872Propithecus_coquereli
YBR048WRPS11B9666.456ENSPNYG00000009309si:dkey-159f12.29866.456Pundamilia_nyererei
YBR048WRPS11B9667.949ENSPNAG00000008314si:dkey-159f12.29767.949Pygocentrus_nattereri
YBR048WRPS11B9556.494ENSRNOG00000009583RGD15633529756.494Rattus_norvegicus
YBR048WRPS11B9669.872ENSRNOG00000020595Rps119869.872Rattus_norvegicus
YBR048WRPS11B9064.138ENSRBIG00000042395-9764.138Rhinopithecus_bieti
YBR048WRPS11B9669.872ENSRBIG00000041174RPS119869.872Rhinopithecus_bieti
YBR048WRPS11B9667.308ENSRROG00000020866-9867.308Rhinopithecus_roxellana
YBR048WRPS11B9669.872ENSRROG00000045541-9869.872Rhinopithecus_roxellana
YBR048WRPS11B9669.872ENSSBOG00000030203RPS119869.872Saimiri_boliviensis_boliviensis
YBR048WRPS11B9768.354ENSSHAG00000004991RPS119968.354Sarcophilus_harrisii
YBR048WRPS11B9667.949ENSSFOG00015004554si:dkey-159f12.26567.949Scleropages_formosus
YBR048WRPS11B9665.823ENSSMAG00000005960si:dkey-159f12.29865.823Scophthalmus_maximus
YBR048WRPS11B9665.823ENSSDUG00000018178si:dkey-159f12.29865.823Seriola_dumerili
YBR048WRPS11B9463.158ENSSLDG00000001611-9263.158Seriola_lalandi_dorsalis
YBR048WRPS11B9665.823ENSSLDG00000009272si:dkey-159f12.29865.823Seriola_lalandi_dorsalis
YBR048WRPS11B9668.590ENSSARG00000006814-9868.590Sorex_araneus
YBR048WRPS11B9669.872ENSSARG00000003236RPS119869.872Sorex_araneus
YBR048WRPS11B9669.032ENSSPUG00000005205RPS119169.032Sphenodon_punctatus
YBR048WRPS11B9665.823ENSSPAG00000011275si:dkey-159f12.29865.823Stegastes_partitus
YBR048WRPS11B9669.872ENSSSCG00000003165RPS119869.872Sus_scrofa
YBR048WRPS11B9668.387ENSTGUG00000000582RPS1110075.455Taeniopygia_guttata
YBR048WRPS11B9665.409ENSTRUG00000014172si:dkey-159f12.29865.409Takifugu_rubripes
YBR048WRPS11B9665.409ENSTNIG00000011680si:dkey-159f12.29865.409Tetraodon_nigroviridis
YBR048WRPS11B9458.824ENSTBEG00000015501-9758.824Tupaia_belangeri
YBR048WRPS11B9669.872ENSTBEG00000016677-9869.872Tupaia_belangeri
YBR048WRPS11B9558.442ENSTTRG00000005495RPS1110058.442Tursiops_truncatus
YBR048WRPS11B9669.872ENSUAMG00000008447RPS119869.872Ursus_americanus
YBR048WRPS11B9669.872ENSUMAG00000002394RPS119869.872Ursus_maritimus
YBR048WRPS11B9669.872ENSVVUG00000022590RPS119869.872Vulpes_vulpes
YBR048WRPS11B6845.045ENSVVUG00000008982-9345.045Vulpes_vulpes
YBR048WRPS11B9070.748ENSVVUG00000011115-9370.748Vulpes_vulpes
YBR048WRPS11B9667.722ENSXCOG00000016637si:dkey-159f12.29867.722Xiphophorus_couchianus
YBR048WRPS11B9667.722ENSXMAG00000009240si:dkey-159f12.29867.722Xiphophorus_maculatus

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