EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YBR061C (Gene tree)
Gene ID: -
Gene Symbol: TRM7
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 933
Position: chrII:364787-365719
Accession: S000000265
RBP type: canonical RBP
Summary: 2'-O-ribose methyltransferase%3B methylates the 2'-O-ribose of tRNA-Phe%2C tRNA-Trp%2C and tRNA-Leu at positions C32 and N34 of tRNA anticodon loop%3B crucial biological role likely modification of tRNA-Phe%3B interacts with Trm732p and Rtt10p in 2'-O-methylation of C32 and N34 substrate tRNAs%2C respectively%3B yeast null mutant can be functionally complemented by human FTSJ1%2C mutations in which have been implicated in nonsyndromic X-linked intellectual disability (NSXLID)

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YBR061C_mRNA	FtsJ	PF01728.19	6.4e-67	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
20844764	Proteome-wide search reveals unexpected RNA binding proteins in Saccharomyces cerevisiae	BioRadArray & yeast	2010 Sep 10	Tsvetanova NG	DOI: 10.1371/journal.pone.0012671

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YBR061C_mRNA	-	933	-	YBR061C_mRNA	310 (aa)	-	P38238

Gene Model

Click here to download YBR061C's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YBR061C's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YBR061C	TRM7	100	48.571	ENSG00000068438	FTSJ1	88	48.571	Homo_sapiens
YBR061C	TRM7	87	55.019	ENSAPOG00000018541	ftsj1	93	51.948	Acanthochromis_polyacanthus
YBR061C	TRM7	100	47.619	ENSAMEG00000012735	FTSJ1	88	47.619	Ailuropoda_melanoleuca
YBR061C	TRM7	87	53.532	ENSACIG00000001541	ftsj1	93	50.325	Amphilophus_citrinellus
YBR061C	TRM7	87	54.212	ENSAOCG00000009380	ftsj1	93	50.641	Amphiprion_ocellaris
YBR061C	TRM7	87	54.212	ENSAPEG00000020434	ftsj1	93	50.962	Amphiprion_percula
YBR061C	TRM7	87	54.044	ENSATEG00000008408	ftsj1	93	50.804	Anabas_testudineus
YBR061C	TRM7	76	49.787	ENSACAG00000016605	FTSJ1	86	47.445	Anolis_carolinensis
YBR061C	TRM7	100	48.243	ENSANAG00000030571	-	88	48.243	Aotus_nancymaae
YBR061C	TRM7	100	47.284	ENSANAG00000035537	-	95	47.588	Aotus_nancymaae
YBR061C	TRM7	87	54.212	ENSACLG00000014226	ftsj1	93	50.962	Astatotilapia_calliptera
YBR061C	TRM7	99	51.623	ENSAMXG00000037663	ftsj1	90	51.623	Astyanax_mexicanus
YBR061C	TRM7	100	45.367	ENSBTAG00000031829	FTSJ1	87	45.367	Bos_taurus
YBR061C	TRM7	94	47.603	ENSBTAG00000046593	-	90	47.603	Bos_taurus
YBR061C	TRM7	99	45.283	WBGene00011281	R74.7	88	45.283	Caenorhabditis_elegans
YBR061C	TRM7	100	48.243	ENSCJAG00000002256	FTSJ1	88	48.243	Callithrix_jacchus
YBR061C	TRM7	87	50.735	ENSCAFG00000015339	FTSJ1	88	47.923	Canis_familiaris
YBR061C	TRM7	87	50.735	ENSCAFG00020021351	FTSJ1	88	47.923	Canis_lupus_dingo
YBR061C	TRM7	100	47.284	ENSCHIG00000000441	-	88	47.284	Capra_hircus
YBR061C	TRM7	87	47.426	ENSCHIG00000021392	-	84	47.426	Capra_hircus
YBR061C	TRM7	99	42.581	ENSCHIG00000017370	-	87	44.194	Capra_hircus
YBR061C	TRM7	100	48.243	ENSTSYG00000029207	FTSJ1	88	48.243	Carlito_syrichta
YBR061C	TRM7	87	43.123	ENSCAPG00000011705	FTSJ1	93	41.558	Cavia_aperea
YBR061C	TRM7	87	50.929	ENSCPOG00000030576	FTSJ1	88	48.377	Cavia_porcellus
YBR061C	TRM7	100	48.243	ENSCCAG00000027731	FTSJ1	88	48.243	Cebus_capucinus
YBR061C	TRM7	100	48.254	ENSCATG00000013045	FTSJ1	88	48.254	Cercocebus_atys
YBR061C	TRM7	87	50.929	ENSCLAG00000011582	FTSJ1	88	48.377	Chinchilla_lanigera
YBR061C	TRM7	100	46.497	ENSCSAG00000013278	FTSJ1	88	47.923	Chlorocebus_sabaeus
YBR061C	TRM7	99	53.247	ENSCING00000008473	-	91	53.247	Ciona_intestinalis
YBR061C	TRM7	99	52.866	ENSCSAVG00000010259	-	96	52.866	Ciona_savignyi
YBR061C	TRM7	100	48.254	ENSCANG00000033841	FTSJ1	88	48.254	Colobus_angolensis_palliatus
YBR061C	TRM7	100	47.097	ENSCGRG00001023654	Ftsj1	88	47.097	Cricetulus_griseus_chok1gshd
YBR061C	TRM7	100	46.774	ENSCGRG00000007253	Ftsj1	88	46.774	Cricetulus_griseus_crigri
YBR061C	TRM7	99	42.857	ENSCSEG00000018843	ftsj1	90	42.857	Cynoglossus_semilaevis
YBR061C	TRM7	99	50.321	ENSCVAG00000009618	ftsj1	95	50.321	Cyprinodon_variegatus
YBR061C	TRM7	87	54.275	ENSDARG00000057089	ftsj1	98	72.308	Danio_rerio
YBR061C	TRM7	100	48.065	ENSDNOG00000047923	-	88	48.065	Dasypus_novemcinctus
YBR061C	TRM7	65	37.811	ENSDNOG00000044320	-	89	33.333	Dasypus_novemcinctus
YBR061C	TRM7	100	48.065	ENSDORG00000000074	Ftsj1	92	48.065	Dipodomys_ordii
YBR061C	TRM7	85	48.302	FBgn0038471	CG5220	83	48.302	Drosophila_melanogaster
YBR061C	TRM7	69	51.628	FBgn0038861	CG7009	67	51.628	Drosophila_melanogaster
YBR061C	TRM7	70	46.296	ENSETEG00000014092	-	62	46.296	Echinops_telfairi
YBR061C	TRM7	69	41.589	ENSETEG00000018343	-	88	35.855	Echinops_telfairi
YBR061C	TRM7	63	49.485	ENSEBUG00000005843	ftsj1	69	48.069	Eptatretus_burgeri
YBR061C	TRM7	59	42.308	ENSEASG00005008272	FTSJ1	60	43.956	Equus_asinus_asinus
YBR061C	TRM7	100	46.497	ENSECAG00000019260	FTSJ1	88	47.923	Equus_caballus
YBR061C	TRM7	100	48.562	ENSEEUG00000001469	FTSJ1	99	48.562	Erinaceus_europaeus
YBR061C	TRM7	87	54.613	ENSELUG00000011483	ftsj1	89	50.968	Esox_lucius
YBR061C	TRM7	100	46.178	ENSFCAG00000026453	FTSJ1	88	47.604	Felis_catus
YBR061C	TRM7	100	47.923	ENSFDAG00000011250	FTSJ1	88	48.065	Fukomys_damarensis
YBR061C	TRM7	87	54.212	ENSFHEG00000008464	ftsj1	93	50.962	Fundulus_heteroclitus
YBR061C	TRM7	87	54.444	ENSGMOG00000004562	ftsj1	99	51.133	Gadus_morhua
YBR061C	TRM7	59	48.634	ENSGAFG00000002036	ftsj1	93	44.595	Gambusia_affinis
YBR061C	TRM7	87	54.444	ENSGACG00000008843	ftsj1	91	51.133	Gasterosteus_aculeatus
YBR061C	TRM7	100	48.571	ENSGGOG00000028552	FTSJ1	88	48.571	Gorilla_gorilla
YBR061C	TRM7	87	54.212	ENSHBUG00000015883	ftsj1	93	50.962	Haplochromis_burtoni
YBR061C	TRM7	100	47.923	ENSHGLG00000003132	FTSJ1	89	48.065	Heterocephalus_glaber_female
YBR061C	TRM7	100	47.923	ENSHGLG00100014682	FTSJ1	89	48.065	Heterocephalus_glaber_male
YBR061C	TRM7	87	54.444	ENSHCOG00000010145	ftsj1	94	50.809	Hippocampus_comes
YBR061C	TRM7	87	54.275	ENSIPUG00000005052	FTSJ1	91	50.974	Ictalurus_punctatus
YBR061C	TRM7	100	47.604	ENSSTOG00000027717	FTSJ1	88	47.742	Ictidomys_tridecemlineatus
YBR061C	TRM7	87	50.000	ENSJJAG00000014517	-	88	47.419	Jaculus_jaculus
YBR061C	TRM7	87	51.301	ENSJJAG00000011596	-	93	48.701	Jaculus_jaculus
YBR061C	TRM7	87	53.903	ENSKMAG00000000645	ftsj1	92	50.649	Kryptolebias_marmoratus
YBR061C	TRM7	87	53.846	ENSLBEG00000005293	ftsj1	83	50.641	Labrus_bergylta
YBR061C	TRM7	85	68.571	ENSLACG00000009913	FTSJ1	74	68.571	Latimeria_chalumnae
YBR061C	TRM7	99	49.675	ENSLOCG00000015688	ftsj1	86	49.675	Lepisosteus_oculatus
YBR061C	TRM7	100	45.048	ENSLAFG00000032618	FTSJ1	88	45.048	Loxodonta_africana
YBR061C	TRM7	100	48.254	ENSMFAG00000003467	FTSJ1	88	48.254	Macaca_fascicularis
YBR061C	TRM7	100	48.254	ENSMMUG00000018894	FTSJ1	88	48.254	Macaca_mulatta
YBR061C	TRM7	100	48.254	ENSMNEG00000044348	FTSJ1	88	48.254	Macaca_nemestrina
YBR061C	TRM7	100	47.604	ENSMLEG00000016789	FTSJ1	88	47.923	Mandrillus_leucophaeus
YBR061C	TRM7	87	54.647	ENSMAMG00000022841	ftsj1	89	51.299	Mastacembelus_armatus
YBR061C	TRM7	87	54.212	ENSMZEG00005022583	ftsj1	93	50.962	Maylandia_zebra
YBR061C	TRM7	100	47.302	ENSMAUG00000015442	Ftsj1	88	47.436	Mesocricetus_auratus
YBR061C	TRM7	87	50.735	ENSMICG00000036228	-	97	48.232	Microcebus_murinus
YBR061C	TRM7	95	46.758	ENSMOCG00000020523	-	86	46.758	Microtus_ochrogaster
YBR061C	TRM7	70	56.682	ENSMOCG00000000507	-	96	56.682	Microtus_ochrogaster
YBR061C	TRM7	100	46.129	ENSMOCG00000021218	-	87	46.129	Microtus_ochrogaster
YBR061C	TRM7	87	52.030	ENSMMOG00000018969	ftsj1	93	48.220	Mola_mola
YBR061C	TRM7	99	51.768	ENSMODG00000011356	FTSJ1	98	51.768	Monodelphis_domestica
YBR061C	TRM7	87	53.532	ENSMALG00000014209	ftsj1	93	50.325	Monopterus_albus
YBR061C	TRM7	100	48.562	MGP_CAROLIEiJ_G0032918	Ftsj1	90	48.562	Mus_caroli
YBR061C	TRM7	100	48.562	ENSMUSG00000031171	Ftsj1	90	48.562	Mus_musculus
YBR061C	TRM7	100	48.562	MGP_PahariEiJ_G0031467	Ftsj1	90	48.562	Mus_pahari
YBR061C	TRM7	100	48.562	MGP_SPRETEiJ_G0034067	Ftsj1	90	48.562	Mus_spretus
YBR061C	TRM7	100	47.604	ENSMPUG00000013493	FTSJ1	88	47.604	Mustela_putorius_furo
YBR061C	TRM7	100	48.077	ENSMLUG00000003977	FTSJ1	88	48.077	Myotis_lucifugus
YBR061C	TRM7	87	46.324	ENSNGAG00000016847	-	88	43.770	Nannospalax_galili
YBR061C	TRM7	87	50.000	ENSNGAG00000018629	-	89	47.115	Nannospalax_galili
YBR061C	TRM7	87	48.525	ENSNBRG00000012481	ftsj1	94	46.221	Neolamprologus_brichardi
YBR061C	TRM7	100	45.079	ENSNLEG00000007816	FTSJ1	88	45.079	Nomascus_leucogenys
YBR061C	TRM7	87	50.735	ENSODEG00000009855	FTSJ1	88	48.387	Octodon_degus
YBR061C	TRM7	87	52.727	ENSONIG00000003966	ftsj1	96	49.682	Oreochromis_niloticus
YBR061C	TRM7	100	46.326	ENSOCUG00000024620	-	90	46.326	Oryctolagus_cuniculus
YBR061C	TRM7	100	47.284	ENSOCUG00000008009	-	88	47.284	Oryctolagus_cuniculus
YBR061C	TRM7	100	46.178	ENSOCUG00000023277	-	90	47.604	Oryctolagus_cuniculus
YBR061C	TRM7	87	52.788	ENSORLG00000028355	ftsj1	94	49.026	Oryzias_latipes
YBR061C	TRM7	87	53.160	ENSORLG00020007897	ftsj1	94	49.351	Oryzias_latipes_hni
YBR061C	TRM7	99	49.026	ENSOMEG00000018497	ftsj1	86	49.026	Oryzias_melastigma
YBR061C	TRM7	100	48.243	ENSOGAG00000032641	-	90	48.243	Otolemur_garnettii
YBR061C	TRM7	87	44.981	ENSOGAG00000016174	-	88	42.903	Otolemur_garnettii
YBR061C	TRM7	87	46.324	ENSOARG00000012099	-	81	46.324	Ovis_aries
YBR061C	TRM7	100	47.284	ENSOARG00000012432	-	88	47.284	Ovis_aries
YBR061C	TRM7	100	48.571	ENSPPAG00000028540	FTSJ1	88	48.571	Pan_paniscus
YBR061C	TRM7	100	46.178	ENSPPRG00000000249	FTSJ1	88	47.604	Panthera_pardus
YBR061C	TRM7	100	46.178	ENSPTIG00000017680	FTSJ1	88	47.604	Panthera_tigris_altaica
YBR061C	TRM7	100	48.571	ENSPTRG00000049433	FTSJ1	88	48.571	Pan_troglodytes
YBR061C	TRM7	100	48.254	ENSPANG00000010102	FTSJ1	88	48.254	Papio_anubis
YBR061C	TRM7	87	53.091	ENSPKIG00000019318	ftsj1	88	50.479	Paramormyrops_kingsleyae
YBR061C	TRM7	96	38.284	ENSPSIG00000007020	FTSJ1	100	38.284	Pelodiscus_sinensis
YBR061C	TRM7	100	48.065	ENSPEMG00000015698	-	88	48.065	Peromyscus_maniculatus_bairdii
YBR061C	TRM7	87	50.929	ENSPEMG00000013262	-	83	50.929	Peromyscus_maniculatus_bairdii
YBR061C	TRM7	87	51.301	ENSPMAG00000006943	FTSJ1	98	48.387	Petromyzon_marinus
YBR061C	TRM7	100	50.321	ENSPCIG00000007236	FTSJ1	93	50.321	Phascolarctos_cinereus
YBR061C	TRM7	87	53.903	ENSPFOG00000017003	ftsj1	93	50.325	Poecilia_formosa
YBR061C	TRM7	87	53.903	ENSPLAG00000016190	ftsj1	89	53.903	Poecilia_latipinna
YBR061C	TRM7	87	54.647	ENSPMEG00000021719	ftsj1	92	50.974	Poecilia_mexicana
YBR061C	TRM7	87	53.903	ENSPREG00000016616	ftsj1	93	50.325	Poecilia_reticulata
YBR061C	TRM7	55	46.471	ENSPPYG00000020309	-	82	46.471	Pongo_abelii
YBR061C	TRM7	100	47.923	ENSPCOG00000022716	-	93	47.923	Propithecus_coquereli
YBR061C	TRM7	100	48.077	ENSPCOG00000018822	-	88	48.077	Propithecus_coquereli
YBR061C	TRM7	87	54.212	ENSPNYG00000011144	ftsj1	93	50.962	Pundamilia_nyererei
YBR061C	TRM7	87	54.647	ENSPNAG00000016330	ftsj1	90	51.466	Pygocentrus_nattereri
YBR061C	TRM7	99	48.553	ENSRNOG00000004776	Ftsj1	88	48.553	Rattus_norvegicus
YBR061C	TRM7	100	48.254	ENSRBIG00000027511	FTSJ1	88	48.254	Rhinopithecus_bieti
YBR061C	TRM7	100	48.254	ENSRROG00000029757	FTSJ1	88	48.254	Rhinopithecus_roxellana
YBR061C	TRM7	100	47.923	ENSSBOG00000028146	FTSJ1	88	48.065	Saimiri_boliviensis_boliviensis
YBR061C	TRM7	99	49.839	ENSSHAG00000012607	FTSJ1	94	49.839	Sarcophilus_harrisii
YBR061C	TRM7	87	54.412	ENSSFOG00015006275	ftsj1	87	50.968	Scleropages_formosus
YBR061C	TRM7	87	54.275	ENSSMAG00000001754	ftsj1	93	50.974	Scophthalmus_maximus
YBR061C	TRM7	87	52.416	ENSSDUG00000015226	ftsj1	93	49.351	Seriola_dumerili
YBR061C	TRM7	87	53.455	ENSSLDG00000019859	ftsj1	93	50.318	Seriola_lalandi_dorsalis
YBR061C	TRM7	87	50.368	ENSSARG00000007091	-	91	47.910	Sorex_araneus
YBR061C	TRM7	85	48.485	ENSSARG00000007246	-	97	48.485	Sorex_araneus
YBR061C	TRM7	87	54.212	ENSSPAG00000022047	ftsj1	93	50.962	Stegastes_partitus
YBR061C	TRM7	99	44.481	ENSSSCG00000025599	FTSJ1	88	47.588	Sus_scrofa
YBR061C	TRM7	87	54.275	ENSTRUG00000016142	ftsj1	92	50.968	Takifugu_rubripes
YBR061C	TRM7	87	54.647	ENSTNIG00000010402	ftsj1	94	51.613	Tetraodon_nigroviridis
YBR061C	TRM7	87	49.265	ENSTTRG00000009027	FTSJ1	88	46.645	Tursiops_truncatus
YBR061C	TRM7	100	47.923	ENSUAMG00000013296	FTSJ1	86	47.923	Ursus_americanus
YBR061C	TRM7	100	43.887	ENSUMAG00000007966	FTSJ1	88	43.887	Ursus_maritimus
YBR061C	TRM7	87	50.735	ENSVVUG00000017640	FTSJ1	88	47.923	Vulpes_vulpes
YBR061C	TRM7	87	50.929	ENSXCOG00000003344	ftsj1	89	47.727	Xiphophorus_couchianus
YBR061C	TRM7	87	54.275	ENSXMAG00000009372	ftsj1	94	50.649	Xiphophorus_maculatus