EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: YBR073W (Gene tree)
Gene ID: -
Gene Symbol: RDH54
Alias: TID1
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 2877
Position: chrII:383112-385988
Accession: S000000277
RBP type: canonical RBP
Summary: DNA-dependent ATPase%3B DNA recombination/repair translocase%2C supercoils DNA and promotes DNA strand opening%3B stimulates strand exchange by modifying dsDNA topology%3B involved in recombinational repair of DNA double-strand breaks (DSBs) during mitosis and meiosis%3B phosphorylated in Mec1p-%2C Rad53p-dependent way in response to one DSB%3B contributes to remodelling of nucleosomes%3B proposed to be involved in crossover interference%3B interacts with Dmc1p%3B stimulates Dmc1p and Rad51p

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YBR073W_mRNA	ResIII	PF04851.15	1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YBR073W_mRNA	-	2877	-	YBR073W_mRNA	958 (aa)	-	P38086

Gene Model

Click here to download YBR073W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YBR073W's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YBR073W	RDH54	50	40.667	YFR038W	-	51	40.667
YBR073W	RDH54	61	37.340	YGL163C	RAD54	67	37.619

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YBR073W	RDH54	61	43.137	ENSG00000265817	FSBP	78	43.137	Homo_sapiens
YBR073W	RDH54	82	37.303	ENSG00000197275	RAD54B	82	36.829	Homo_sapiens
YBR073W	RDH54	61	41.883	ENSAMEG00000005834	-	62	41.883	Ailuropoda_melanoleuca
YBR073W	RDH54	80	37.192	ENSACIG00000013005	rad54b	83	37.328	Amphilophus_citrinellus
YBR073W	RDH54	80	37.125	ENSAOCG00000008523	rad54b	80	36.473	Amphiprion_ocellaris
YBR073W	RDH54	85	35.376	ENSAPEG00000001673	rad54b	65	41.951	Amphiprion_percula
YBR073W	RDH54	96	34.238	ENSATEG00000001527	rad54b	87	37.530	Anabas_testudineus
YBR073W	RDH54	93	35.381	ENSAPLG00000014366	-	91	34.889	Anas_platyrhynchos
YBR073W	RDH54	88	37.217	ENSACAG00000003671	-	97	36.652	Anolis_carolinensis
YBR073W	RDH54	61	42.339	ENSANAG00000019528	-	86	42.339	Aotus_nancymaae
YBR073W	RDH54	85	35.882	ENSACLG00000007826	rad54b	90	35.571	Astatotilapia_calliptera
YBR073W	RDH54	79	36.768	ENSAMXG00000039985	rad54b	86	36.641	Astyanax_mexicanus
YBR073W	RDH54	82	37.150	ENSBTAG00000000632	RAD54B	82	36.752	Bos_taurus
YBR073W	RDH54	80	31.100	WBGene00013792	Y116A8C.13	87	30.984	Caenorhabditis_elegans
YBR073W	RDH54	61	42.998	ENSCJAG00000000080	-	77	42.998	Callithrix_jacchus
YBR073W	RDH54	61	42.045	ENSCAFG00000009179	RAD54B	62	41.883	Canis_familiaris
YBR073W	RDH54	61	42.045	ENSCAFG00020012084	-	62	42.045	Canis_lupus_dingo
YBR073W	RDH54	82	37.333	ENSCHIG00000008230	-	82	36.925	Capra_hircus
YBR073W	RDH54	82	36.765	ENSTSYG00000013234	-	82	36.330	Carlito_syrichta
YBR073W	RDH54	79	38.107	ENSCPOG00000011643	-	79	38.059	Cavia_porcellus
YBR073W	RDH54	61	42.998	ENSCCAG00000011754	-	77	42.998	Cebus_capucinus
YBR073W	RDH54	79	37.957	ENSCATG00000030661	-	77	43.069	Cercocebus_atys
YBR073W	RDH54	59	42.833	ENSCLAG00000010476	-	80	37.327	Chinchilla_lanigera
YBR073W	RDH54	82	37.500	ENSCSAG00000012712	-	81	36.900	Chlorocebus_sabaeus
YBR073W	RDH54	88	36.425	ENSCPBG00000003204	-	83	38.053	Chrysemys_picta_bellii
YBR073W	RDH54	82	37.454	ENSCANG00000017939	-	77	43.234	Colobus_angolensis_palliatus
YBR073W	RDH54	84	35.476	ENSCGRG00001020184	Rad54b	86	36.168	Cricetulus_griseus_chok1gshd
YBR073W	RDH54	79	36.616	ENSCGRG00000016752	Rad54b	80	37.357	Cricetulus_griseus_crigri
YBR073W	RDH54	82	36.341	ENSCSEG00000001601	rad54b	88	36.220	Cynoglossus_semilaevis
YBR073W	RDH54	79	38.065	ENSCVAG00000009200	rad54b	82	37.814	Cyprinodon_variegatus
YBR073W	RDH54	88	34.062	ENSDARG00000092134	rad54b	97	32.796	Danio_rerio
YBR073W	RDH54	83	36.419	ENSDNOG00000015535	-	82	35.870	Dasypus_novemcinctus
YBR073W	RDH54	61	42.529	ENSDORG00000002492	Rad54b	82	37.703	Dipodomys_ordii
YBR073W	RDH54	75	37.838	ENSETEG00000010605	-	86	37.432	Echinops_telfairi
YBR073W	RDH54	61	36.741	ENSEBUG00000009104	rad54b	62	36.741	Eptatretus_burgeri
YBR073W	RDH54	61	42.010	ENSEASG00005004021	-	63	41.599	Equus_asinus_asinus
YBR073W	RDH54	61	42.339	ENSECAG00000021949	-	65	42.339	Equus_caballus
YBR073W	RDH54	80	36.216	ENSELUG00000009287	rad54b	60	41.080	Esox_lucius
YBR073W	RDH54	61	42.669	ENSFCAG00000015513	-	77	42.669	Felis_catus
YBR073W	RDH54	68	40.030	ENSFALG00000005467	-	85	36.353	Ficedula_albicollis
YBR073W	RDH54	67	40.774	ENSFDAG00000020541	-	82	36.308	Fukomys_damarensis
YBR073W	RDH54	79	37.070	ENSFHEG00000014382	rad54b	80	37.580	Fundulus_heteroclitus
YBR073W	RDH54	78	38.481	ENSGMOG00000014774	rad54b	88	37.909	Gadus_morhua
YBR073W	RDH54	88	36.136	ENSGALG00000043597	RAD54B	85	35.447	Gallus_gallus
YBR073W	RDH54	88	35.698	ENSGAFG00000007901	rad54b	91	35.354	Gambusia_affinis
YBR073W	RDH54	82	37.973	ENSGACG00000009128	rad54b	81	37.455	Gasterosteus_aculeatus
YBR073W	RDH54	88	35.553	ENSGAGG00000018747	-	85	34.989	Gopherus_agassizii
YBR073W	RDH54	82	37.303	ENSGGOG00000023516	-	82	36.829	Gorilla_gorilla
YBR073W	RDH54	79	37.183	ENSHBUG00000016017	rad54b	76	36.829	Haplochromis_burtoni
YBR073W	RDH54	79	38.228	ENSHGLG00000008263	RAD54B	78	37.295	Heterocephalus_glaber_female
YBR073W	RDH54	79	37.719	ENSHGLG00100008108	-	78	36.921	Heterocephalus_glaber_male
YBR073W	RDH54	81	37.391	ENSHCOG00000004764	rad54b	94	35.407	Hippocampus_comes
YBR073W	RDH54	79	37.103	ENSIPUG00000018531	rad54b	76	37.103	Ictalurus_punctatus
YBR073W	RDH54	78	37.500	ENSSTOG00000010791	-	78	37.883	Ictidomys_tridecemlineatus
YBR073W	RDH54	78	37.323	ENSJJAG00000010314	Rad54b	78	37.066	Jaculus_jaculus
YBR073W	RDH54	79	37.224	ENSKMAG00000004744	rad54b	85	36.888	Kryptolebias_marmoratus
YBR073W	RDH54	78	43.478	ENSLACG00000000859	-	76	40.681	Latimeria_chalumnae
YBR073W	RDH54	71	38.678	ENSLOCG00000010100	rad54b	97	34.565	Lepisosteus_oculatus
YBR073W	RDH54	61	42.951	ENSLAFG00000015315	-	69	42.951	Loxodonta_africana
YBR073W	RDH54	82	37.209	ENSMFAG00000031629	-	77	43.069	Macaca_fascicularis
YBR073W	RDH54	82	37.209	ENSMMUG00000005659	-	81	36.609	Macaca_mulatta
YBR073W	RDH54	83	37.077	ENSMNEG00000016408	-	84	36.606	Macaca_nemestrina
YBR073W	RDH54	82	37.209	ENSMLEG00000006946	-	81	36.609	Mandrillus_leucophaeus
YBR073W	RDH54	81	36.298	ENSMAMG00000012269	rad54b	85	36.621	Mastacembelus_armatus
YBR073W	RDH54	79	37.056	ENSMZEG00005005281	rad54b	87	36.948	Maylandia_zebra
YBR073W	RDH54	88	36.384	ENSMGAG00000012024	-	85	35.860	Meleagris_gallopavo
YBR073W	RDH54	78	37.042	ENSMAUG00000013586	Rad54b	80	36.802	Mesocricetus_auratus
YBR073W	RDH54	82	37.470	ENSMICG00000000754	-	86	36.874	Microcebus_murinus
YBR073W	RDH54	78	36.585	ENSMOCG00000020035	Rad54b	80	36.306	Microtus_ochrogaster
YBR073W	RDH54	77	37.419	ENSMMOG00000003394	rad54b	61	41.924	Mola_mola
YBR073W	RDH54	80	37.375	ENSMODG00000007343	-	90	37.250	Monodelphis_domestica
YBR073W	RDH54	54	42.458	ENSMALG00000001520	rad54b	81	42.572	Monopterus_albus
YBR073W	RDH54	78	36.375	MGP_CAROLIEiJ_G0025810	Rad54b	91	34.350	Mus_caroli
YBR073W	RDH54	61	41.051	ENSMUSG00000078773	Rad54b	91	33.935	Mus_musculus
YBR073W	RDH54	78	36.364	MGP_PahariEiJ_G0023933	Rad54b	80	36.701	Mus_pahari
YBR073W	RDH54	68	38.913	MGP_SPRETEiJ_G0026758	Rad54b	92	34.043	Mus_spretus
YBR073W	RDH54	61	42.574	ENSMPUG00000008878	-	69	42.574	Mustela_putorius_furo
YBR073W	RDH54	79	37.468	ENSMLUG00000008953	-	61	42.036	Myotis_lucifugus
YBR073W	RDH54	94	34.255	ENSNGAG00000017537	Rad54b	94	34.574	Nannospalax_galili
YBR073W	RDH54	85	36.095	ENSNBRG00000013394	rad54b	89	35.756	Neolamprologus_brichardi
YBR073W	RDH54	80	37.970	ENSNLEG00000003062	-	77	43.137	Nomascus_leucogenys
YBR073W	RDH54	66	44.886	ENSMEUG00000012426	-	63	44.886	Notamacropus_eugenii
YBR073W	RDH54	61	42.175	ENSODEG00000002650	-	76	41.845	Octodon_degus
YBR073W	RDH54	79	37.736	ENSODEG00000019564	-	79	37.500	Octodon_degus
YBR073W	RDH54	80	36.940	ENSONIG00000006067	rad54b	80	36.398	Oreochromis_niloticus
YBR073W	RDH54	70	38.723	ENSOANG00000011348	-	83	39.149	Ornithorhynchus_anatinus
YBR073W	RDH54	79	38.295	ENSOCUG00000016478	-	78	37.611	Oryctolagus_cuniculus
YBR073W	RDH54	80	36.465	ENSORLG00000008918	rad54b	86	41.735	Oryzias_latipes
YBR073W	RDH54	61	41.735	ENSORLG00020012171	rad54b	86	41.735	Oryzias_latipes_hni
YBR073W	RDH54	80	36.829	ENSORLG00015018536	rad54b	77	36.613	Oryzias_latipes_hsok
YBR073W	RDH54	64	40.495	ENSOMEG00000004345	rad54b	77	40.495	Oryzias_melastigma
YBR073W	RDH54	65	41.564	ENSOGAG00000007854	-	82	36.553	Otolemur_garnettii
YBR073W	RDH54	61	42.787	ENSOARG00000007691	-	89	37.656	Ovis_aries
YBR073W	RDH54	82	37.073	ENSPPAG00000029572	-	81	36.597	Pan_paniscus
YBR073W	RDH54	61	42.504	ENSPPRG00000007571	-	77	42.504	Panthera_pardus
YBR073W	RDH54	61	42.669	ENSPTIG00000012670	-	77	42.669	Panthera_tigris_altaica
YBR073W	RDH54	82	37.546	ENSPTRG00000020427	-	78	43.464	Pan_troglodytes
YBR073W	RDH54	82	37.209	ENSPANG00000019566	-	81	36.609	Papio_anubis
YBR073W	RDH54	92	34.973	ENSPKIG00000014974	rad54b	89	34.721	Paramormyrops_kingsleyae
YBR073W	RDH54	88	36.457	ENSPSIG00000002383	-	95	36.456	Pelodiscus_sinensis
YBR073W	RDH54	65	41.385	ENSPEMG00000012133	Rad54b	79	37.852	Peromyscus_maniculatus_bairdii
YBR073W	RDH54	64	39.324	ENSPMAG00000002916	rad54b	89	35.723	Petromyzon_marinus
YBR073W	RDH54	81	37.376	ENSPCIG00000020151	-	88	37.376	Phascolarctos_cinereus
YBR073W	RDH54	81	37.091	ENSPFOG00000023411	rad54b	79	37.576	Poecilia_formosa
YBR073W	RDH54	81	37.091	ENSPLAG00000010430	rad54b	79	37.576	Poecilia_latipinna
YBR073W	RDH54	80	37.500	ENSPMEG00000016873	rad54b	88	37.995	Poecilia_mexicana
YBR073W	RDH54	82	35.800	ENSPREG00000018443	rad54b	88	35.962	Poecilia_reticulata
YBR073W	RDH54	82	37.424	ENSPPYG00000018750	-	82	36.829	Pongo_abelii
YBR073W	RDH54	82	37.394	ENSPCOG00000026845	-	83	41.970	Propithecus_coquereli
YBR073W	RDH54	61	42.553	ENSPVAG00000000261	-	65	42.390	Pteropus_vampyrus
YBR073W	RDH54	82	36.124	ENSPNYG00000018303	rad54b	93	36.342	Pundamilia_nyererei
YBR073W	RDH54	90	35.084	ENSPNAG00000000295	rad54b	92	34.943	Pygocentrus_nattereri
YBR073W	RDH54	78	36.294	ENSRNOG00000039949	Rad54b	80	36.294	Rattus_norvegicus
YBR073W	RDH54	82	37.454	ENSRBIG00000020419	-	81	36.978	Rhinopithecus_bieti
YBR073W	RDH54	82	37.332	ENSRROG00000039897	-	81	36.855	Rhinopithecus_roxellana
YBR073W	RDH54	82	36.842	ENSSBOG00000028501	-	81	36.364	Saimiri_boliviensis_boliviensis
YBR073W	RDH54	79	37.786	ENSSHAG00000017038	-	61	41.941	Sarcophilus_harrisii
YBR073W	RDH54	59	43.328	ENSSFOG00015008483	rad54b	87	43.216	Scleropages_formosus
YBR073W	RDH54	80	37.624	ENSSMAG00000018659	rad54b	89	36.374	Scophthalmus_maximus
YBR073W	RDH54	84	36.449	ENSSDUG00000001122	rad54b	79	37.055	Seriola_dumerili
YBR073W	RDH54	84	36.374	ENSSLDG00000013787	rad54b	89	34.982	Seriola_lalandi_dorsalis
YBR073W	RDH54	88	35.480	ENSSPUG00000016497	-	88	35.281	Sphenodon_punctatus
YBR073W	RDH54	79	37.484	ENSSPAG00000012800	rad54b	81	37.595	Stegastes_partitus
YBR073W	RDH54	82	36.925	ENSSSCG00000006101	-	89	38.198	Sus_scrofa
YBR073W	RDH54	68	39.265	ENSTGUG00000011880	-	85	35.819	Taeniopygia_guttata
YBR073W	RDH54	80	37.577	ENSTRUG00000010015	rad54b	60	42.258	Takifugu_rubripes
YBR073W	RDH54	82	34.872	ENSTTRG00000006312	-	82	34.872	Tursiops_truncatus
YBR073W	RDH54	61	42.045	ENSUMAG00000016401	-	83	35.962	Ursus_maritimus
YBR073W	RDH54	61	42.175	ENSVPAG00000003157	-	82	36.496	Vicugna_pacos
YBR073W	RDH54	69	37.795	ENSXETG00000025924	rad54b	90	30.457	Xenopus_tropicalis
YBR073W	RDH54	85	35.882	ENSXMAG00000013141	rad54b	89	36.137	Xiphophorus_maculatus