EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: YBR142W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Essential nucleolar protein%3B putative DEAD-box RNA helicase required for maintenance of M1 dsRNA virus%3B involved in biogenesis of large (60S) ribosomal subunits
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 2322 bases
Position: chrII:528317-530638
Accession: S000000346
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YBR142W_mRNA	ResIII	PF04851.15	1.2e-07	1	1
YBR142W_mRNA	DEAD	PF00270.29	2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YBR142W_mRNA	-	2322	-	YBR142W_mRNA	773 (aa)	-	P38112

Gene Model

Click here to download YBR142W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YBR142W's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YBR142W	-	59	30.652	YGL078C	-	64	31.250
YBR142W	-	55	31.567	YHR065C	-	70	31.567
YBR142W	-	54	31.455	YMR290C	-	71	31.455
YBR142W	-	57	31.385	YDR194C	-	59	31.333
YBR142W	-	52	30.602	YPL119C	DBP1	57	30.602
YBR142W	-	52	30.882	YHR169W	-	80	30.882
YBR142W	-	55	30.290	YOR204W	DED1	64	30.290
YBR142W	-	52	30.807	YNL112W	-	63	30.807

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YBR142W	-	73	36.486	ENSG00000089737	DDX24	86	33.264	Homo_sapiens
YBR142W	-	72	40.625	ENSAPOG00000014909	ddx24	55	40.625	Acanthochromis_polyacanthus
YBR142W	-	73	39.062	ENSAMEG00000015848	DDX24	58	39.062	Ailuropoda_melanoleuca
YBR142W	-	64	33.065	ENSACIG00000024338	ddx24	83	32.965	Amphilophus_citrinellus
YBR142W	-	76	40.625	ENSAOCG00000006168	ddx24	61	40.625	Amphiprion_ocellaris
YBR142W	-	64	40.625	ENSAPEG00000023765	ddx24	58	40.625	Amphiprion_percula
YBR142W	-	73	37.349	ENSATEG00000022048	ddx24	55	37.349	Anabas_testudineus
YBR142W	-	70	44.444	ENSAPLG00000011111	DDX24	72	32.716	Anas_platyrhynchos
YBR142W	-	73	36.842	ENSACAG00000008545	DDX24	86	32.714	Anolis_carolinensis
YBR142W	-	71	37.143	ENSANAG00000003080	DDX24	86	33.471	Aotus_nancymaae
YBR142W	-	72	40.580	ENSACLG00000022194	ddx24	56	40.580	Astatotilapia_calliptera
YBR142W	-	71	42.593	ENSAMXG00000014635	ddx24	56	42.593	Astyanax_mexicanus
YBR142W	-	64	38.462	ENSBTAG00000003423	DDX24	63	38.462	Bos_taurus
YBR142W	-	66	31.179	WBGene00018890	F55F8.2	63	31.166	Caenorhabditis_elegans
YBR142W	-	73	37.143	ENSCJAG00000009683	DDX24	86	33.678	Callithrix_jacchus
YBR142W	-	72	38.356	ENSCAFG00000017624	DDX24	60	38.356	Canis_familiaris
YBR142W	-	73	38.356	ENSCAFG00020014505	DDX24	62	38.356	Canis_lupus_dingo
YBR142W	-	64	39.062	ENSCHIG00000010074	DDX24	60	39.062	Capra_hircus
YBR142W	-	73	36.000	ENSTSYG00000030376	-	74	33.740	Carlito_syrichta
YBR142W	-	55	33.255	ENSTSYG00000025429	-	95	31.911	Carlito_syrichta
YBR142W	-	64	34.004	ENSCAPG00000007592	DDX24	60	34.004	Cavia_aperea
YBR142W	-	72	39.062	ENSCPOG00000005884	DDX24	61	39.062	Cavia_porcellus
YBR142W	-	73	37.143	ENSCCAG00000036112	DDX24	86	33.678	Cebus_capucinus
YBR142W	-	72	39.062	ENSCATG00000038277	DDX24	57	39.062	Cercocebus_atys
YBR142W	-	74	36.842	ENSCLAG00000011454	DDX24	66	36.842	Chinchilla_lanigera
YBR142W	-	73	36.486	ENSCSAG00000010975	DDX24	58	36.486	Chlorocebus_sabaeus
YBR142W	-	72	40.278	ENSCPBG00000008942	DDX24	61	40.278	Chrysemys_picta_bellii
YBR142W	-	65	34.133	ENSCING00000003655	-	76	34.192	Ciona_intestinalis
YBR142W	-	66	33.755	ENSCSAVG00000001436	-	70	33.755	Ciona_savignyi
YBR142W	-	64	32.394	ENSCANG00000031880	-	75	32.394	Colobus_angolensis_palliatus
YBR142W	-	73	36.486	ENSCANG00000035722	-	58	36.486	Colobus_angolensis_palliatus
YBR142W	-	72	34.409	ENSCGRG00001009522	Ddx24	65	34.409	Cricetulus_griseus_chok1gshd
YBR142W	-	72	34.409	ENSCGRG00000015047	Ddx24	65	34.409	Cricetulus_griseus_crigri
YBR142W	-	72	43.750	ENSCSEG00000001004	ddx24	54	43.750	Cynoglossus_semilaevis
YBR142W	-	56	34.411	ENSCVAG00000005890	ddx24	77	33.266	Cyprinodon_variegatus
YBR142W	-	73	34.211	ENSDARG00000104708	ddx24	58	37.143	Danio_rerio
YBR142W	-	73	35.526	ENSDNOG00000005339	DDX24	58	35.526	Dasypus_novemcinctus
YBR142W	-	78	36.842	ENSDORG00000003636	Ddx24	86	33.809	Dipodomys_ordii
YBR142W	-	78	30.769	FBgn0034496	CG9143	90	30.000	Drosophila_melanogaster
YBR142W	-	71	42.593	ENSETEG00000009693	DDX24	60	39.062	Echinops_telfairi
YBR142W	-	72	39.062	ENSEASG00005021430	DDX24	58	36.486	Equus_asinus_asinus
YBR142W	-	72	39.062	ENSECAG00000008887	DDX24	59	36.486	Equus_caballus
YBR142W	-	72	36.508	ENSEEUG00000001618	DDX24	61	39.623	Erinaceus_europaeus
YBR142W	-	76	32.277	ENSELUG00000009567	ddx24	62	33.663	Esox_lucius
YBR142W	-	73	37.037	ENSFCAG00000010229	DDX24	59	37.037	Felis_catus
YBR142W	-	70	46.296	ENSFALG00000002491	DDX24	60	46.296	Ficedula_albicollis
YBR142W	-	78	37.333	ENSFDAG00000014561	DDX24	63	37.333	Fukomys_damarensis
YBR142W	-	72	38.235	ENSFHEG00000010949	ddx24	63	38.235	Fundulus_heteroclitus
YBR142W	-	72	36.232	ENSGMOG00000010403	ddx24	61	36.232	Gadus_morhua
YBR142W	-	71	39.062	ENSGALG00000010884	DDX24	59	39.062	Gallus_gallus
YBR142W	-	56	34.483	ENSGAFG00000009607	ddx24	86	33.811	Gambusia_affinis
YBR142W	-	63	39.062	ENSGACG00000008087	ddx24	60	39.062	Gasterosteus_aculeatus
YBR142W	-	73	36.486	ENSGGOG00000006739	DDX24	95	33.199	Gorilla_gorilla
YBR142W	-	72	40.580	ENSHBUG00000021747	ddx24	56	40.580	Haplochromis_burtoni
YBR142W	-	72	40.299	ENSHGLG00000003177	-	65	40.299	Heterocephalus_glaber_female
YBR142W	-	73	30.179	ENSHGLG00000010321	-	70	30.179	Heterocephalus_glaber_female
YBR142W	-	78	36.364	ENSHGLG00100013439	DDX24	59	36.364	Heterocephalus_glaber_male
YBR142W	-	74	32.941	ENSHCOG00000019867	ddx24	64	31.772	Hippocampus_comes
YBR142W	-	71	42.593	ENSIPUG00000007005	ddx24	53	42.593	Ictalurus_punctatus
YBR142W	-	73	36.000	ENSSTOG00000005355	DDX24	63	36.000	Ictidomys_tridecemlineatus
YBR142W	-	64	34.112	ENSJJAG00000010842	Ddx24	67	32.276	Jaculus_jaculus
YBR142W	-	66	34.940	ENSKMAG00000004507	ddx24	58	34.940	Kryptolebias_marmoratus
YBR142W	-	66	35.000	ENSLBEG00000020888	ddx24	50	35.000	Labrus_bergylta
YBR142W	-	72	42.857	ENSLACG00000006072	DDX24	61	42.857	Latimeria_chalumnae
YBR142W	-	73	37.037	ENSLOCG00000012997	ddx24	59	37.037	Lepisosteus_oculatus
YBR142W	-	73	39.474	ENSLAFG00000029076	DDX24	58	39.474	Loxodonta_africana
YBR142W	-	73	36.486	ENSMFAG00000033695	DDX24	58	36.486	Macaca_fascicularis
YBR142W	-	73	36.486	ENSMMUG00000007763	DDX24	96	33.199	Macaca_mulatta
YBR142W	-	73	36.486	ENSMNEG00000043984	DDX24	58	36.486	Macaca_nemestrina
YBR142W	-	73	36.486	ENSMLEG00000039614	DDX24	58	36.486	Mandrillus_leucophaeus
YBR142W	-	73	35.294	ENSMAMG00000003235	ddx24	57	35.294	Mastacembelus_armatus
YBR142W	-	72	40.580	ENSMZEG00005008402	ddx24	56	40.580	Maylandia_zebra
YBR142W	-	71	39.062	ENSMGAG00000013175	DDX24	60	41.667	Meleagris_gallopavo
YBR142W	-	72	34.884	ENSMAUG00000020026	Ddx24	64	34.884	Mesocricetus_auratus
YBR142W	-	66	34.279	ENSMICG00000008376	DDX24	74	32.587	Microcebus_murinus
YBR142W	-	72	40.625	ENSMOCG00000013171	Ddx24	55	40.625	Microtus_ochrogaster
YBR142W	-	72	40.625	ENSMMOG00000013945	ddx24	91	33.063	Mola_mola
YBR142W	-	70	42.593	ENSMODG00000002336	DDX24	63	39.062	Monodelphis_domestica
YBR142W	-	75	34.077	ENSMALG00000007688	ddx24	59	34.066	Monopterus_albus
YBR142W	-	64	34.824	MGP_CAROLIEiJ_G0018053	Ddx24	59	34.021	Mus_caroli
YBR142W	-	68	33.693	ENSMUSG00000041645	Ddx24	63	34.021	Mus_musculus
YBR142W	-	58	34.118	MGP_SPRETEiJ_G0018898	Ddx24	55	34.118	Mus_spretus
YBR142W	-	73	39.474	ENSMPUG00000003318	DDX24	63	39.474	Mustela_putorius_furo
YBR142W	-	73	34.524	ENSMLUG00000001158	DDX24	61	39.062	Myotis_lucifugus
YBR142W	-	65	30.178	ENSNGAG00000014769	-	54	30.813	Nannospalax_galili
YBR142W	-	73	37.143	ENSNGAG00000001003	-	58	37.143	Nannospalax_galili
YBR142W	-	72	40.580	ENSNBRG00000007296	ddx24	56	40.580	Neolamprologus_brichardi
YBR142W	-	64	30.181	ENSNLEG00000017240	DDX24	73	30.181	Nomascus_leucogenys
YBR142W	-	64	35.938	ENSMEUG00000010386	-	58	35.938	Notamacropus_eugenii
YBR142W	-	73	36.842	ENSOPRG00000000562	DDX24	61	36.842	Ochotona_princeps
YBR142W	-	72	40.625	ENSODEG00000002236	-	94	33.470	Octodon_degus
YBR142W	-	72	40.580	ENSONIG00000020143	ddx24	57	40.580	Oreochromis_niloticus
YBR142W	-	71	36.232	ENSOANG00000014362	DDX24	65	36.232	Ornithorhynchus_anatinus
YBR142W	-	73	35.526	ENSOCUG00000002604	DDX24	62	35.526	Oryctolagus_cuniculus
YBR142W	-	74	39.189	ENSORLG00000004581	ddx24	61	39.189	Oryzias_latipes
YBR142W	-	73	39.189	ENSORLG00020008743	ddx24	61	39.189	Oryzias_latipes_hni
YBR142W	-	73	39.189	ENSORLG00015007758	ddx24	58	39.189	Oryzias_latipes_hsok
YBR142W	-	93	33.671	ENSOMEG00000023149	ddx24	70	33.471	Oryzias_melastigma
YBR142W	-	63	39.062	ENSOGAG00000005841	DDX24	55	39.062	Otolemur_garnettii
YBR142W	-	72	39.189	ENSOARG00000014341	DDX24	58	39.189	Ovis_aries
YBR142W	-	73	36.486	ENSPPAG00000038713	DDX24	86	33.264	Pan_paniscus
YBR142W	-	73	37.037	ENSPPRG00000007394	DDX24	60	37.037	Panthera_pardus
YBR142W	-	73	37.037	ENSPTIG00000013158	DDX24	70	33.131	Panthera_tigris_altaica
YBR142W	-	73	36.486	ENSPTRG00000006673	DDX24	85	33.471	Pan_troglodytes
YBR142W	-	73	36.486	ENSPANG00000022385	DDX24	58	36.486	Papio_anubis
YBR142W	-	73	39.130	ENSPKIG00000005168	ddx24	59	39.130	Paramormyrops_kingsleyae
YBR142W	-	69	46.296	ENSPSIG00000009329	DDX24	59	42.188	Pelodiscus_sinensis
YBR142W	-	63	33.130	ENSPMGG00000019572	ddx24	88	33.130	Periophthalmus_magnuspinnatus
YBR142W	-	72	33.333	ENSPEMG00000018618	Ddx24	60	33.333	Peromyscus_maniculatus_bairdii
YBR142W	-	72	39.062	ENSPCIG00000026635	DDX24	60	39.062	Phascolarctos_cinereus
YBR142W	-	65	40.625	ENSPFOG00000011214	ddx24	87	32.957	Poecilia_formosa
YBR142W	-	65	40.625	ENSPLAG00000010940	ddx24	86	33.954	Poecilia_latipinna
YBR142W	-	56	34.101	ENSPMEG00000006458	ddx24	86	33.947	Poecilia_mexicana
YBR142W	-	65	40.625	ENSPREG00000014459	ddx24	86	34.497	Poecilia_reticulata
YBR142W	-	73	36.486	ENSPPYG00000006095	DDX24	58	36.486	Pongo_abelii
YBR142W	-	72	38.028	ENSPCAG00000002873	DDX24	57	38.028	Procavia_capensis
YBR142W	-	64	34.667	ENSPCOG00000018298	DDX24	76	32.540	Propithecus_coquereli
YBR142W	-	71	41.667	ENSPVAG00000015101	DDX24	57	41.667	Pteropus_vampyrus
YBR142W	-	72	40.580	ENSPNYG00000022795	ddx24	56	40.580	Pundamilia_nyererei
YBR142W	-	72	39.062	ENSPNAG00000008956	ddx24	58	39.062	Pygocentrus_nattereri
YBR142W	-	64	39.062	ENSRNOG00000009166	Ddx24	57	39.062	Rattus_norvegicus
YBR142W	-	73	35.443	ENSRBIG00000039022	DDX24	86	33.471	Rhinopithecus_bieti
YBR142W	-	64	31.791	ENSRROG00000039473	-	88	31.653	Rhinopithecus_roxellana
YBR142W	-	73	35.443	ENSRROG00000023933	-	85	30.785	Rhinopithecus_roxellana
YBR142W	-	72	37.143	ENSSBOG00000035521	DDX24	93	33.469	Saimiri_boliviensis_boliviensis
YBR142W	-	73	39.062	ENSSHAG00000009060	DDX24	64	39.062	Sarcophilus_harrisii
YBR142W	-	72	42.188	ENSSFOG00015015044	ddx24	57	39.189	Scleropages_formosus
YBR142W	-	72	43.750	ENSSMAG00000002784	ddx24	54	43.750	Scophthalmus_maximus
YBR142W	-	71	40.625	ENSSDUG00000001658	ddx24	57	40.625	Seriola_dumerili
YBR142W	-	72	37.333	ENSSLDG00000019202	ddx24	55	36.585	Seriola_lalandi_dorsalis
YBR142W	-	70	50.000	ENSSPUG00000017730	DDX24	59	50.000	Sphenodon_punctatus
YBR142W	-	72	42.188	ENSSPAG00000011620	ddx24	55	42.188	Stegastes_partitus
YBR142W	-	64	37.500	ENSSSCG00000002470	DDX24	75	37.500	Sus_scrofa
YBR142W	-	63	32.114	ENSTGUG00000012637	-	90	32.311	Taeniopygia_guttata
YBR142W	-	76	40.625	ENSTRUG00000006101	ddx24	61	40.625	Takifugu_rubripes
YBR142W	-	66	32.902	ENSTNIG00000017368	ddx24	71	32.195	Tetraodon_nigroviridis
YBR142W	-	71	37.179	ENSTTRG00000008795	DDX24	58	37.179	Tursiops_truncatus
YBR142W	-	52	35.396	ENSUAMG00000024662	DDX24	74	36.296	Ursus_americanus
YBR142W	-	73	39.189	ENSUMAG00000004481	DDX24	58	39.189	Ursus_maritimus
YBR142W	-	71	41.935	ENSVVUG00000018672	DDX24	60	38.889	Vulpes_vulpes
YBR142W	-	95	32.959	ENSXETG00000010314	ddx24	67	39.130	Xenopus_tropicalis
YBR142W	-	56	33.179	ENSXMAG00000013600	ddx24	79	33.402	Xiphophorus_maculatus