EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YBR154C (Gene tree)
Gene ID: -
Gene Symbol: RPB5
Alias: -
Full Name: RNA polymerase subunit ABC27%3B common to RNA polymerases I%2C II%2C and III%3B contacts DNA and affects transactivation
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 648 bases
Position: chrII:548362-549009
Accession: S000000358
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YBR154C_mRNA	RNA_pol_Rpb5_N	PF03871.14	3.8e-30	1	1
YBR154C_mRNA	RNA_pol_Rpb5_C	PF01191.19	1.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YBR154C_mRNA	-	648	-	YBR154C_mRNA	215 (aa)	-	P20434

Gene Model

Click here to download YBR154C's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YBR154C's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YBR154C	RPB5	98	43.578	ENSG00000099817	POLR2E	99	51.515	Homo_sapiens
YBR154C	RPB5	98	44.954	ENSAPOG00000002935	polr2eb	99	44.954	Acanthochromis_polyacanthus
YBR154C	RPB5	98	43.578	ENSAMEG00000003159	POLR2E	99	43.578	Ailuropoda_melanoleuca
YBR154C	RPB5	98	40.553	ENSACIG00000024371	polr2eb	99	40.553	Amphilophus_citrinellus
YBR154C	RPB5	98	44.954	ENSAOCG00000018166	polr2eb	99	44.954	Amphiprion_ocellaris
YBR154C	RPB5	98	44.954	ENSAPEG00000009000	polr2eb	99	44.954	Amphiprion_percula
YBR154C	RPB5	98	44.954	ENSATEG00000023760	polr2eb	99	44.954	Anabas_testudineus
YBR154C	RPB5	98	43.578	ENSANAG00000038488	POLR2E	99	43.578	Aotus_nancymaae
YBR154C	RPB5	98	45.413	ENSACLG00000005254	polr2eb	99	45.413	Astatotilapia_calliptera
YBR154C	RPB5	98	44.495	ENSAMXG00000018915	POLR2E	99	44.495	Astyanax_mexicanus
YBR154C	RPB5	98	43.578	ENSBTAG00000020776	POLR2E	99	43.578	Bos_taurus
YBR154C	RPB5	99	44.651	WBGene00019246	rpb-5	99	44.651	Caenorhabditis_elegans
YBR154C	RPB5	60	51.908	ENSCJAG00000007666	-	72	51.908	Callithrix_jacchus
YBR154C	RPB5	98	41.743	ENSCAFG00000019546	POLR2E	99	41.743	Canis_familiaris
YBR154C	RPB5	98	43.578	ENSCAFG00020017111	POLR2E	99	43.578	Canis_lupus_dingo
YBR154C	RPB5	98	43.578	ENSCHIG00000014151	POLR2E	99	43.578	Capra_hircus
YBR154C	RPB5	98	35.321	ENSTSYG00000026377	POLR2E	99	35.321	Carlito_syrichta
YBR154C	RPB5	90	45.000	ENSCAPG00000010843	POLR2E	92	45.000	Cavia_aperea
YBR154C	RPB5	98	43.578	ENSCPOG00000001542	POLR2E	99	43.578	Cavia_porcellus
YBR154C	RPB5	98	43.578	ENSCCAG00000025658	POLR2E	99	43.578	Cebus_capucinus
YBR154C	RPB5	98	43.578	ENSCATG00000008926	POLR2E	99	43.578	Cercocebus_atys
YBR154C	RPB5	98	43.578	ENSCLAG00000014874	-	99	43.578	Chinchilla_lanigera
YBR154C	RPB5	97	37.799	ENSCLAG00000009238	-	100	37.799	Chinchilla_lanigera
YBR154C	RPB5	98	43.578	ENSCSAG00000012336	POLR2E	99	43.578	Chlorocebus_sabaeus
YBR154C	RPB5	98	43.578	ENSCPBG00000009702	POLR2E	99	43.578	Chrysemys_picta_bellii
YBR154C	RPB5	98	46.330	ENSCING00000024933	-	99	46.330	Ciona_intestinalis
YBR154C	RPB5	98	43.578	ENSCANG00000025560	POLR2E	99	43.578	Colobus_angolensis_palliatus
YBR154C	RPB5	98	44.037	ENSCGRG00001022927	Polr2e	99	44.037	Cricetulus_griseus_chok1gshd
YBR154C	RPB5	98	40.991	ENSCGRG00000016441	Polr2e	99	40.991	Cricetulus_griseus_crigri
YBR154C	RPB5	99	45.000	ENSCSEG00000007107	polr2eb	99	40.092	Cynoglossus_semilaevis
YBR154C	RPB5	98	44.954	ENSCVAG00000019940	polr2eb	99	44.954	Cyprinodon_variegatus
YBR154C	RPB5	98	44.495	ENSDARG00000026183	polr2eb	99	44.495	Danio_rerio
YBR154C	RPB5	89	41.206	ENSDNOG00000044994	POLR2E	83	41.206	Dasypus_novemcinctus
YBR154C	RPB5	98	43.578	ENSDORG00000001154	Polr2e	99	43.578	Dipodomys_ordii
YBR154C	RPB5	98	44.495	FBgn0033571	Rpb5	99	44.495	Drosophila_melanogaster
YBR154C	RPB5	73	36.585	ENSEBUG00000010159	-	75	36.585	Eptatretus_burgeri
YBR154C	RPB5	60	51.908	ENSEASG00005021615	POLR2E	57	51.908	Equus_asinus_asinus
YBR154C	RPB5	98	38.710	ENSECAG00000011124	POLR2E	99	38.710	Equus_caballus
YBR154C	RPB5	98	44.240	ENSELUG00000020646	polr2e	99	44.240	Esox_lucius
YBR154C	RPB5	98	44.700	ENSELUG00000005815	POLR2E	99	44.700	Esox_lucius
YBR154C	RPB5	98	43.578	ENSFCAG00000007318	POLR2E	99	43.578	Felis_catus
YBR154C	RPB5	90	44.776	ENSFALG00000013986	POLR2E	98	44.776	Ficedula_albicollis
YBR154C	RPB5	98	43.578	ENSFDAG00000014539	POLR2E	99	43.578	Fukomys_damarensis
YBR154C	RPB5	98	44.954	ENSFHEG00000022398	polr2eb	99	44.954	Fundulus_heteroclitus
YBR154C	RPB5	98	44.954	ENSGMOG00000007615	polr2eb	99	44.954	Gadus_morhua
YBR154C	RPB5	98	43.578	ENSGALG00000002591	POLR2E	99	43.578	Gallus_gallus
YBR154C	RPB5	98	45.413	ENSGAFG00000005087	polr2eb	99	45.413	Gambusia_affinis
YBR154C	RPB5	98	44.495	ENSGACG00000013247	polr2eb	99	44.495	Gasterosteus_aculeatus
YBR154C	RPB5	98	43.578	ENSGAGG00000008356	POLR2E	99	43.578	Gopherus_agassizii
YBR154C	RPB5	98	43.578	ENSGGOG00000011267	POLR2E	99	43.578	Gorilla_gorilla
YBR154C	RPB5	60	55.725	ENSHBUG00000011099	polr2eb	95	55.725	Haplochromis_burtoni
YBR154C	RPB5	98	42.661	ENSHGLG00000013330	POLR2E	99	42.661	Heterocephalus_glaber_female
YBR154C	RPB5	98	42.661	ENSHGLG00100011014	POLR2E	99	42.661	Heterocephalus_glaber_male
YBR154C	RPB5	98	44.495	ENSHCOG00000000906	polr2eb	99	44.495	Hippocampus_comes
YBR154C	RPB5	52	33.898	ENSHCOG00000012099	-	85	33.898	Hippocampus_comes
YBR154C	RPB5	98	44.954	ENSIPUG00000019801	polr2e	99	44.954	Ictalurus_punctatus
YBR154C	RPB5	98	43.578	ENSSTOG00000002853	POLR2E	99	43.578	Ictidomys_tridecemlineatus
YBR154C	RPB5	72	30.435	ENSJJAG00000015812	-	95	30.435	Jaculus_jaculus
YBR154C	RPB5	98	38.426	ENSJJAG00000003145	-	98	38.426	Jaculus_jaculus
YBR154C	RPB5	98	44.037	ENSJJAG00000016595	-	99	44.037	Jaculus_jaculus
YBR154C	RPB5	98	44.954	ENSKMAG00000005954	polr2eb	99	44.954	Kryptolebias_marmoratus
YBR154C	RPB5	98	44.954	ENSLBEG00000024802	polr2eb	99	44.954	Labrus_bergylta
YBR154C	RPB5	98	45.872	ENSLACG00000013686	POLR2E	99	45.872	Latimeria_chalumnae
YBR154C	RPB5	76	37.427	ENSLOCG00000004599	POLR2E	99	37.427	Lepisosteus_oculatus
YBR154C	RPB5	99	39.367	ENSLAFG00000025587	POLR2E	99	39.367	Loxodonta_africana
YBR154C	RPB5	98	43.578	ENSMFAG00000002884	POLR2E	99	43.578	Macaca_fascicularis
YBR154C	RPB5	98	43.578	ENSMMUG00000013927	POLR2E	99	43.578	Macaca_mulatta
YBR154C	RPB5	98	43.578	ENSMNEG00000034046	-	99	43.578	Macaca_nemestrina
YBR154C	RPB5	90	40.306	ENSMLEG00000012405	POLR2E	93	40.306	Mandrillus_leucophaeus
YBR154C	RPB5	98	44.954	ENSMAMG00000018703	polr2eb	99	44.954	Mastacembelus_armatus
YBR154C	RPB5	98	40.553	ENSMZEG00005010796	polr2eb	99	40.553	Maylandia_zebra
YBR154C	RPB5	98	43.119	ENSMGAG00000003769	POLR2E	99	43.119	Meleagris_gallopavo
YBR154C	RPB5	90	45.500	ENSMAUG00000010125	-	99	45.500	Mesocricetus_auratus
YBR154C	RPB5	88	36.316	ENSMAUG00000011003	-	93	36.316	Mesocricetus_auratus
YBR154C	RPB5	98	43.578	ENSMICG00000013063	POLR2E	99	43.578	Microcebus_murinus
YBR154C	RPB5	98	44.037	ENSMOCG00000013414	Polr2e	99	44.037	Microtus_ochrogaster
YBR154C	RPB5	98	38.249	ENSMMOG00000001161	polr2eb	99	38.249	Mola_mola
YBR154C	RPB5	88	43.367	ENSMMOG00000001167	polr2eb	86	43.367	Mola_mola
YBR154C	RPB5	98	43.578	ENSMODG00000005494	POLR2E	99	43.578	Monodelphis_domestica
YBR154C	RPB5	98	44.954	ENSMALG00000021888	polr2eb	99	44.954	Monopterus_albus
YBR154C	RPB5	98	44.037	MGP_CAROLIEiJ_G0015561	Polr2e	99	44.037	Mus_caroli
YBR154C	RPB5	98	44.037	ENSMUSG00000004667	Polr2e	99	44.037	Mus_musculus
YBR154C	RPB5	98	44.037	MGP_PahariEiJ_G0030974	Polr2e	99	44.037	Mus_pahari
YBR154C	RPB5	98	44.037	MGP_SPRETEiJ_G0016379	Polr2e	99	44.037	Mus_spretus
YBR154C	RPB5	98	43.119	ENSMPUG00000008953	POLR2E	99	43.119	Mustela_putorius_furo
YBR154C	RPB5	65	32.639	ENSMLUG00000006376	-	98	31.928	Myotis_lucifugus
YBR154C	RPB5	98	43.578	ENSMLUG00000013193	POLR2E	99	43.578	Myotis_lucifugus
YBR154C	RPB5	98	44.037	ENSNGAG00000001147	Polr2e	99	44.037	Nannospalax_galili
YBR154C	RPB5	88	34.211	ENSNGAG00000017344	-	100	34.211	Nannospalax_galili
YBR154C	RPB5	98	40.553	ENSNBRG00000022772	polr2eb	99	40.553	Neolamprologus_brichardi
YBR154C	RPB5	98	33.796	ENSNLEG00000031364	-	98	33.796	Nomascus_leucogenys
YBR154C	RPB5	98	42.466	ENSNLEG00000001207	-	99	42.466	Nomascus_leucogenys
YBR154C	RPB5	98	39.450	ENSOPRG00000008331	POLR2E	99	39.450	Ochotona_princeps
YBR154C	RPB5	98	43.578	ENSODEG00000013230	-	99	43.578	Octodon_degus
YBR154C	RPB5	98	31.019	ENSODEG00000011490	-	98	31.019	Octodon_degus
YBR154C	RPB5	87	38.743	ENSODEG00000007985	-	99	38.743	Octodon_degus
YBR154C	RPB5	98	44.954	ENSONIG00000002519	polr2eb	99	44.954	Oreochromis_niloticus
YBR154C	RPB5	98	45.413	ENSORLG00000015346	polr2eb	99	45.413	Oryzias_latipes
YBR154C	RPB5	98	45.413	ENSORLG00020020700	polr2e	99	45.413	Oryzias_latipes_hni
YBR154C	RPB5	98	45.413	ENSORLG00015016842	polr2e	99	45.413	Oryzias_latipes_hsok
YBR154C	RPB5	98	44.954	ENSOMEG00000002709	polr2eb	99	44.954	Oryzias_melastigma
YBR154C	RPB5	98	43.578	ENSOGAG00000012311	POLR2E	99	43.578	Otolemur_garnettii
YBR154C	RPB5	98	43.578	ENSOARG00000010994	POLR2E	99	43.578	Ovis_aries
YBR154C	RPB5	90	45.000	ENSPPAG00000003145	POLR2E	99	45.000	Pan_paniscus
YBR154C	RPB5	98	43.578	ENSPPRG00000000777	POLR2E	99	43.578	Panthera_pardus
YBR154C	RPB5	94	35.238	ENSPTIG00000012237	POLR2E	98	37.037	Panthera_tigris_altaica
YBR154C	RPB5	98	43.578	ENSPTRG00000010183	POLR2E	99	43.578	Pan_troglodytes
YBR154C	RPB5	98	43.578	ENSPANG00000018011	POLR2E	99	43.578	Papio_anubis
YBR154C	RPB5	98	44.954	ENSPKIG00000024123	POLR2E	99	44.954	Paramormyrops_kingsleyae
YBR154C	RPB5	98	44.954	ENSPKIG00000009607	POLR2E	99	44.954	Paramormyrops_kingsleyae
YBR154C	RPB5	91	45.320	ENSPSIG00000002870	POLR2E	93	45.320	Pelodiscus_sinensis
YBR154C	RPB5	98	40.092	ENSPMGG00000014354	polr2eb	99	40.092	Periophthalmus_magnuspinnatus
YBR154C	RPB5	98	44.037	ENSPEMG00000023261	Polr2e	99	44.037	Peromyscus_maniculatus_bairdii
YBR154C	RPB5	89	40.909	ENSPCIG00000007312	POLR2E	74	40.909	Phascolarctos_cinereus
YBR154C	RPB5	98	45.413	ENSPFOG00000005734	polr2eb	99	45.413	Poecilia_formosa
YBR154C	RPB5	98	45.413	ENSPLAG00000014496	polr2eb	99	45.413	Poecilia_latipinna
YBR154C	RPB5	98	45.413	ENSPMEG00000008053	polr2eb	99	45.413	Poecilia_mexicana
YBR154C	RPB5	98	45.413	ENSPREG00000006489	polr2eb	99	45.413	Poecilia_reticulata
YBR154C	RPB5	98	41.096	ENSPPYG00000009305	POLR2E	99	41.096	Pongo_abelii
YBR154C	RPB5	51	48.649	ENSPCAG00000016605	POLR2E	100	48.649	Procavia_capensis
YBR154C	RPB5	98	43.578	ENSPCOG00000014491	POLR2E	99	43.578	Propithecus_coquereli
YBR154C	RPB5	54	34.959	ENSPVAG00000007718	-	54	34.959	Pteropus_vampyrus
YBR154C	RPB5	89	43.216	ENSPNYG00000019797	polr2eb	95	43.216	Pundamilia_nyererei
YBR154C	RPB5	98	44.495	ENSPNAG00000026263	POLR2E	99	44.495	Pygocentrus_nattereri
YBR154C	RPB5	98	44.037	ENSRNOG00000013545	Polr2e	99	44.037	Rattus_norvegicus
YBR154C	RPB5	98	43.578	ENSRBIG00000028726	-	99	43.578	Rhinopithecus_bieti
YBR154C	RPB5	98	31.925	ENSRBIG00000027259	-	98	31.925	Rhinopithecus_bieti
YBR154C	RPB5	98	43.578	ENSRROG00000043763	POLR2E	99	43.578	Rhinopithecus_roxellana
YBR154C	RPB5	98	43.578	ENSSBOG00000027241	POLR2E	99	43.578	Saimiri_boliviensis_boliviensis
YBR154C	RPB5	98	43.578	ENSSHAG00000010690	POLR2E	99	43.578	Sarcophilus_harrisii
YBR154C	RPB5	98	44.954	ENSSFOG00015006073	polr2e	99	44.954	Scleropages_formosus
YBR154C	RPB5	98	44.954	ENSSMAG00000012782	polr2eb	99	44.954	Scophthalmus_maximus
YBR154C	RPB5	98	44.954	ENSSDUG00000003352	polr2eb	99	44.954	Seriola_dumerili
YBR154C	RPB5	98	44.954	ENSSLDG00000004965	polr2eb	99	44.954	Seriola_lalandi_dorsalis
YBR154C	RPB5	98	42.202	ENSSPUG00000006114	POLR2E	99	42.202	Sphenodon_punctatus
YBR154C	RPB5	98	44.954	ENSSPAG00000017556	polr2eb	99	44.954	Stegastes_partitus
YBR154C	RPB5	98	43.578	ENSSSCG00000021472	POLR2E	99	43.578	Sus_scrofa
YBR154C	RPB5	66	32.886	ENSTGUG00000000922	POLR2E	98	32.886	Taeniopygia_guttata
YBR154C	RPB5	98	40.092	ENSTRUG00000018238	polr2eb	99	40.092	Takifugu_rubripes
YBR154C	RPB5	98	44.954	ENSTNIG00000013187	polr2eb	99	44.954	Tetraodon_nigroviridis
YBR154C	RPB5	98	43.119	ENSTTRG00000001484	POLR2E	99	43.119	Tursiops_truncatus
YBR154C	RPB5	99	39.091	ENSUAMG00000009166	POLR2E	99	39.091	Ursus_americanus
YBR154C	RPB5	99	44.545	ENSVVUG00000022818	POLR2E	54	44.545	Vulpes_vulpes
YBR154C	RPB5	98	44.495	ENSXETG00000003291	polr2e	99	44.495	Xenopus_tropicalis
YBR154C	RPB5	98	40.553	ENSXCOG00000009197	polr2eb	99	40.553	Xiphophorus_couchianus
YBR154C	RPB5	98	45.413	ENSXMAG00000026495	polr2eb	99	45.413	Xiphophorus_maculatus