EuRBPDB

Description

Ensembl ID: YBR212W (Gene tree)
Gene ID: -
Gene Symbol: NGR1
Alias: RBP1
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 2019
Position: chrII:647886-649904
Accession: S000000416
RBP type: canonical RBP
Summary: RNA binding protein that negatively regulates growth rate%3B interacts with the 3' UTR of the mitochondrial porin (POR1) mRNA and enhances its degradation%3B overexpression impairs mitochondrial function%3B interacts with Dhh1p to mediate POR1 mRNA decay%3B expressed in stationary phase

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YBR212W_mRNA	RRM_1	PF00076.22	3.2e-44	1	2
YBR212W_mRNA	RRM_1	PF00076.22	3.2e-44	2	2

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
25173706	Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins	RNPxl.PAR_CL & yeast	2014 Aug 31	Kramer K	DOI: 10.1038/nmeth.3092
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128
23222640	Global analysis of yeast mRNPs	IC & yeast	2012 Dec 9	Mitchell SF	DOI: 10.1038/nsmb.2468

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
					(aa)

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YBR212W	NGR1	63	31.148	YHR086W	NAM8	67	30.282