EuRBPDB

Description

Ensembl ID: YCL037C (Gene tree)
Gene ID: -
Gene Symbol: SRO9
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 1305
Position: chrIII:57374-58678
Accession: S000000542
RBP type: canonical RBP
Summary: Cytoplasmic RNA-binding protein%3B shuttles between nucleus and cytoplasm and is exported from the nucleus in an mRNA export-dependent manner%3B associates with translating ribosomes%3B involved in heme regulation of Hap1p as a component of the HMC complex%2C also involved in the organization of actin filaments%3B contains a La motif%3B SRO9 has a paralog%2C SLF1%2C that arose from the whole genome duplication

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YCL037C_mRNA	La	PF05383.17	2e-17	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
25173706	Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins	RNPxl.PAR_CL & yeast	2014 Aug 31	Kramer K	DOI: 10.1038/nmeth.3092
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128
23222640	Global analysis of yeast mRNPs	IC & yeast	2012 Dec 9	Mitchell SF	DOI: 10.1038/nsmb.2468
20844764	Proteome-wide search reveals unexpected RNA binding proteins in Saccharomyces cerevisiae	MS & yeast	2010 Sep 10	Tsvetanova NG	DOI: 10.1371/journal.pone.0012671

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YCL037C_mRNA	-	1305	-	YCL037C_mRNA	434 (aa)	-	P25567

Gene Model

Protein-Protein Interaction (PPI)