EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YCL054W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: AdoMet-dependent methyltransferase%3B involved in rRNA processing and 60S ribosomal subunit maturation%3B methylates G2922 in the tRNA docking site of the large subunit rRNA and in the absence of snR52%2C U2921%3B suppressor of PAB1 mutants
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 2526 bases
Position: chrIII:31449-33974
Accession: S000000559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YCL054W_mRNA	FtsJ	PF01728.19	3e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YCL054W_mRNA	-	2526	-	YCL054W_mRNA	841 (aa)	-	P25582

Gene Model

Click here to download YCL054W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YCL054W's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YCL054W	-	62	50.357	ENSAPOG00000005543	ftsj3	79	42.239	Acanthochromis_polyacanthus
YCL054W	-	53	42.612	ENSAMEG00000003148	FTSJ3	55	42.735	Ailuropoda_melanoleuca
YCL054W	-	61	43.626	ENSACIG00000012880	ftsj3	83	38.235	Amphilophus_citrinellus
YCL054W	-	53	43.460	ENSAOCG00000023196	ftsj3	97	36.282	Amphiprion_ocellaris
YCL054W	-	51	43.956	ENSAPEG00000004250	ftsj3	98	35.722	Amphiprion_percula
YCL054W	-	76	44.262	ENSACLG00000019137	ftsj3	99	37.083	Astatotilapia_calliptera
YCL054W	-	99	35.450	ENSBTAG00000021060	FTSJ3	55	41.860	Bos_taurus
YCL054W	-	99	35.206	WBGene00019168	H06I04.3	59	43.409	Caenorhabditis_elegans
YCL054W	-	51	42.506	ENSCJAG00000019631	FTSJ3	52	41.834	Callithrix_jacchus
YCL054W	-	53	41.139	ENSCAFG00000012770	FTSJ3	55	41.314	Canis_familiaris
YCL054W	-	53	41.314	ENSCAFG00020026630	FTSJ3	55	41.489	Canis_lupus_dingo
YCL054W	-	53	41.737	ENSCHIG00000025676	FTSJ3	56	42.161	Capra_hircus
YCL054W	-	70	40.984	ENSTSYG00000001393	FTSJ3	75	39.623	Carlito_syrichta
YCL054W	-	64	41.033	ENSCAPG00000016654	FTSJ3	87	41.337	Cavia_aperea
YCL054W	-	58	40.000	ENSCPOG00000011384	FTSJ3	100	35.996	Cavia_porcellus
YCL054W	-	51	41.964	ENSCCAG00000023533	-	100	35.156	Cebus_capucinus
YCL054W	-	58	40.079	ENSCATG00000018510	FTSJ3	54	42.004	Cercocebus_atys
YCL054W	-	53	41.915	ENSCLAG00000003222	FTSJ3	54	42.585	Chinchilla_lanigera
YCL054W	-	58	39.686	ENSCSAG00000003921	FTSJ3	54	41.614	Chlorocebus_sabaeus
YCL054W	-	77	42.974	ENSCPBG00000010032	FTSJ3	81	44.295	Chrysemys_picta_bellii
YCL054W	-	58	49.536	ENSCING00000025069	-	93	46.076	Ciona_intestinalis
YCL054W	-	58	48.734	ENSCSAVG00000003607	-	73	49.226	Ciona_savignyi
YCL054W	-	58	39.882	ENSCANG00000042921	FTSJ3	54	41.826	Colobus_angolensis_palliatus
YCL054W	-	99	35.847	ENSCGRG00001018068	FTSJ3	100	35.513	Cricetulus_griseus_chok1gshd
YCL054W	-	99	35.847	ENSCGRG00000010648	FTSJ3	100	35.513	Cricetulus_griseus_crigri
YCL054W	-	51	43.573	ENSCSEG00000013468	ftsj3	96	35.531	Cynoglossus_semilaevis
YCL054W	-	99	36.605	ENSDARG00000104938	ftsj3	98	36.028	Danio_rerio
YCL054W	-	55	41.176	ENSDNOG00000002392	FTSJ3	55	41.350	Dasypus_novemcinctus
YCL054W	-	53	42.340	ENSDORG00000004200	Ftsj3	100	34.357	Dipodomys_ordii
YCL054W	-	75	41.737	ENSETEG00000019228	FTSJ3	76	41.737	Echinops_telfairi
YCL054W	-	76	41.770	ENSEASG00005013565	FTSJ3	86	42.825	Equus_asinus_asinus
YCL054W	-	57	40.237	ENSECAG00000011995	FTSJ3	55	42.072	Equus_caballus
YCL054W	-	75	41.151	ENSFCAG00000013983	FTSJ3	77	41.542	Felis_catus
YCL054W	-	63	39.007	ENSFDAG00000010274	FTSJ3	55	42.675	Fukomys_damarensis
YCL054W	-	51	44.295	ENSFHEG00000007639	ftsj3	97	35.868	Fundulus_heteroclitus
YCL054W	-	55	42.363	ENSGAGG00000006236	FTSJ3	55	42.283	Gopherus_agassizii
YCL054W	-	55	44.559	ENSHBUG00000022331	ftsj3	96	36.271	Haplochromis_burtoni
YCL054W	-	99	35.894	ENSHGLG00000012282	FTSJ3	100	35.006	Heterocephalus_glaber_female
YCL054W	-	99	35.894	ENSHGLG00100003578	FTSJ3	100	35.006	Heterocephalus_glaber_male
YCL054W	-	51	45.455	ENSHCOG00000018770	ftsj3	96	36.813	Hippocampus_comes
YCL054W	-	53	42.678	ENSIPUG00000024942	ftsj3	94	34.607	Ictalurus_punctatus
YCL054W	-	53	43.973	ENSSTOG00000021265	FTSJ3	55	43.220	Ictidomys_tridecemlineatus
YCL054W	-	53	42.217	ENSJJAG00000012822	Ftsj3	55	42.431	Jaculus_jaculus
YCL054W	-	53	44.894	ENSKMAG00000021997	ftsj3	96	37.045	Kryptolebias_marmoratus
YCL054W	-	53	42.094	ENSLBEG00000027142	ftsj3	97	35.102	Labrus_bergylta
YCL054W	-	63	38.721	ENSLAFG00000003252	FTSJ3	54	42.128	Loxodonta_africana
YCL054W	-	58	40.275	ENSMFAG00000003764	FTSJ3	100	35.650	Macaca_fascicularis
YCL054W	-	76	43.871	ENSMMUG00000016768	FTSJ3	78	42.217	Macaca_mulatta
YCL054W	-	58	40.275	ENSMNEG00000029254	FTSJ3	100	35.722	Macaca_nemestrina
YCL054W	-	58	40.000	ENSMLEG00000029091	FTSJ3	54	41.915	Mandrillus_leucophaeus
YCL054W	-	55	44.262	ENSMZEG00005001992	ftsj3	96	36.054	Maylandia_zebra
YCL054W	-	77	41.224	ENSMGAG00000000953	FTSJ3	70	42.857	Meleagris_gallopavo
YCL054W	-	99	36.121	ENSMAUG00000015688	Ftsj3	100	36.023	Mesocricetus_auratus
YCL054W	-	73	41.791	ENSMICG00000045996	FTSJ3	76	41.915	Microcebus_murinus
YCL054W	-	64	39.716	ENSMOCG00000017809	Ftsj3	55	43.041	Microtus_ochrogaster
YCL054W	-	80	41.525	ENSMMOG00000019522	ftsj3	90	35.307	Mola_mola
YCL054W	-	79	40.234	ENSMODG00000009901	FTSJ3	99	33.969	Monodelphis_domestica
YCL054W	-	64	39.261	MGP_CAROLIEiJ_G0017315	Ftsj3	54	42.857	Mus_caroli
YCL054W	-	99	35.576	ENSMUSG00000020706	Ftsj3	54	42.766	Mus_musculus
YCL054W	-	99	35.308	MGP_PahariEiJ_G0018445	Ftsj3	54	42.675	Mus_pahari
YCL054W	-	63	39.821	MGP_SPRETEiJ_G0018159	Ftsj3	65	39.716	Mus_spretus
YCL054W	-	77	40.937	ENSMPUG00000014911	FTSJ3	76	41.949	Mustela_putorius_furo
YCL054W	-	75	41.758	ENSMLUG00000011667	FTSJ3	86	38.790	Myotis_lucifugus
YCL054W	-	76	44.262	ENSNBRG00000017453	ftsj3	89	44.374	Neolamprologus_brichardi
YCL054W	-	53	41.314	ENSNLEG00000004188	FTSJ3	54	41.737	Nomascus_leucogenys
YCL054W	-	55	40.937	ENSOPRG00000014985	FTSJ3	100	34.033	Ochotona_princeps
YCL054W	-	100	36.496	ENSODEG00000008167	FTSJ3	100	35.667	Octodon_degus
YCL054W	-	55	44.672	ENSONIG00000001654	ftsj3	97	35.843	Oreochromis_niloticus
YCL054W	-	76	43.169	ENSOCUG00000004319	FTSJ3	77	42.484	Oryctolagus_cuniculus
YCL054W	-	53	41.826	ENSORLG00000005910	ftsj3	97	35.459	Oryzias_latipes
YCL054W	-	72	42.920	ENSORLG00020021255	ftsj3	97	35.570	Oryzias_latipes_hni
YCL054W	-	53	42.553	ENSORLG00015018416	ftsj3	97	35.794	Oryzias_latipes_hsok
YCL054W	-	63	50.286	ENSOMEG00000014432	ftsj3	84	42.217	Oryzias_melastigma
YCL054W	-	53	42.521	ENSOGAG00000032479	FTSJ3	54	43.562	Otolemur_garnettii
YCL054W	-	53	41.314	ENSOARG00000013637	FTSJ3	55	42.161	Ovis_aries
YCL054W	-	62	49.853	ENSPPRG00000003042	FTSJ3	74	42.411	Panthera_pardus
YCL054W	-	75	40.984	ENSPTIG00000012576	FTSJ3	77	40.928	Panthera_tigris_altaica
YCL054W	-	58	40.079	ENSPANG00000020978	FTSJ3	54	42.004	Papio_anubis
YCL054W	-	70	43.653	ENSPKIG00000012838	ftsj3	97	35.674	Paramormyrops_kingsleyae
YCL054W	-	76	38.515	ENSPMGG00000012959	ftsj3	54	37.637	Periophthalmus_magnuspinnatus
YCL054W	-	99	36.512	ENSPEMG00000000248	Ftsj3	100	36.281	Peromyscus_maniculatus_bairdii
YCL054W	-	58	40.079	ENSPCIG00000009088	FTSJ3	54	41.202	Phascolarctos_cinereus
YCL054W	-	61	49.003	ENSPLAG00000003846	ftsj3	97	35.650	Poecilia_latipinna
YCL054W	-	99	37.133	ENSPPYG00000008532	FTSJ3	100	36.713	Pongo_abelii
YCL054W	-	53	41.649	ENSPCAG00000002560	FTSJ3	55	42.072	Procavia_capensis
YCL054W	-	53	42.308	ENSPCOG00000023921	FTSJ3	54	42.644	Propithecus_coquereli
YCL054W	-	75	42.308	ENSPVAG00000000162	FTSJ3	76	41.949	Pteropus_vampyrus
YCL054W	-	77	44.262	ENSPNYG00000005108	ftsj3	97	38.636	Pundamilia_nyererei
YCL054W	-	64	38.556	ENSRNOG00000009857	Ftsj3	55	42.644	Rattus_norvegicus
YCL054W	-	58	40.079	ENSRBIG00000039259	FTSJ3	55	42.038	Rhinopithecus_bieti
YCL054W	-	58	40.079	ENSRROG00000045002	FTSJ3	54	42.038	Rhinopithecus_roxellana
YCL054W	-	53	40.773	ENSSHAG00000013062	FTSJ3	54	40.598	Sarcophilus_harrisii
YCL054W	-	99	34.315	ENSSFOG00015018053	ftsj3	97	33.822	Scleropages_formosus
YCL054W	-	99	35.476	ENSSDUG00000003385	ftsj3	97	36.414	Seriola_dumerili
YCL054W	-	99	36.468	ENSSLDG00000017970	ftsj3	96	35.857	Seriola_lalandi_dorsalis
YCL054W	-	73	41.618	ENSSSCG00000017288	FTSJ3	77	41.614	Sus_scrofa
YCL054W	-	76	42.916	ENSTRUG00000017550	ftsj3	97	35.576	Takifugu_rubripes
YCL054W	-	56	43.121	ENSTNIG00000015549	ftsj3	99	36.054	Tetraodon_nigroviridis
YCL054W	-	65	45.455	ENSTBEG00000010295	FTSJ3	100	32.805	Tupaia_belangeri
YCL054W	-	73	43.529	ENSTTRG00000006973	FTSJ3	77	42.612	Tursiops_truncatus
YCL054W	-	74	42.735	ENSUMAG00000017450	FTSJ3	77	42.857	Ursus_maritimus
YCL054W	-	53	41.525	ENSVVUG00000006106	FTSJ3	55	41.702	Vulpes_vulpes
YCL054W	-	96	34.023	ENSXETG00000006939	ftsj3	72	40.690	Xenopus_tropicalis