EuRBPDB

Description

Ensembl ID: YCR002C (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 969
Position: chrIII:117380-118348
Accession: S000000595
RBP type: canonical RBP
Summary: Component of the septin ring%2C required for cytokinesis%3B septins are GTP-binding proteins that assemble into rod-like hetero-oligomers that can associate to form filaments%3B septin rings at the mother-bud neck act as scaffolds for recruiting cell division factors and as barriers to prevent diffusion of specific proteins between mother and daughter cells%3B N-terminus interacts with phosphatidylinositol-4%2C5-bisphosphate%3B protein abundance increases under DNA damage stress

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YCR002C_mRNA	MMR_HSR1	PF01926.23	3.2e-10	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YCR002C_mRNA	-	969	-	YCR002C_mRNA	322 (aa)	-	P25342

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YCR002C	-	89	40.000	YHR107C	CDC12	73	40.199
YCR002C	-	85	41.343	YJR076C	CDC11	67	41.343

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YCR002C	-	92	44.631	ENSCING00000004910	-	83	43.098	Ciona_intestinalis