EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YCR057C (Gene tree)
Gene ID: -
Gene Symbol: PWP2
Alias: UTP1|YCR055C|YCR058C
Full Name: Conserved 90S pre-ribosomal component%3B essential for proper endonucleolytic cleavage of the 35 S rRNA precursor at A0%2C A1%2C and A2 sites%3B contains eight WD-repeats%3B PWP2 deletion leads to defects in cell cycle and bud morphogenesis
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 2772 bases
Position: chrIII:220457-223228
Accession: S000000653
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YCR057C_mRNA	Utp12	PF04003.12	5.6e-22	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128
23222640	Global analysis of yeast mRNPs	IC & yeast	2012 Dec 9	Mitchell SF	DOI: 10.1038/nsmb.2468

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YCR057C_mRNA	-	2772	-	YCR057C_mRNA	923 (aa)	-	P25635

Gene Model

Click here to download YCR057C's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YCR057C's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YCR057C	PWP2	92	43.679	ENSG00000241945	PWP2	98	42.998	Homo_sapiens
YCR057C	PWP2	92	43.280	ENSAPOG00000021522	pwp2h	95	43.850	Acanthochromis_polyacanthus
YCR057C	PWP2	92	43.444	ENSAMEG00000010907	-	95	43.444	Ailuropoda_melanoleuca
YCR057C	PWP2	92	42.616	ENSACIG00000024109	pwp2h	95	42.616	Amphilophus_citrinellus
YCR057C	PWP2	92	42.987	ENSAOCG00000014853	pwp2h	98	44.353	Amphiprion_ocellaris
YCR057C	PWP2	92	43.101	ENSAPEG00000008152	pwp2h	97	43.234	Amphiprion_percula
YCR057C	PWP2	92	42.548	ENSATEG00000015493	pwp2h	99	43.423	Anabas_testudineus
YCR057C	PWP2	92	43.601	ENSAPLG00000010371	-	95	43.262	Anas_platyrhynchos
YCR057C	PWP2	96	43.137	ENSACAG00000017861	-	96	43.213	Anolis_carolinensis
YCR057C	PWP2	92	44.018	ENSANAG00000034845	-	95	44.131	Aotus_nancymaae
YCR057C	PWP2	95	41.967	ENSACLG00000011425	pwp2h	96	42.455	Astatotilapia_calliptera
YCR057C	PWP2	92	43.653	ENSAMXG00000007988	pwp2h	95	41.472	Astyanax_mexicanus
YCR057C	PWP2	92	43.552	ENSBTAG00000007105	-	98	43.502	Bos_taurus
YCR057C	PWP2	92	34.593	WBGene00018891	F55F8.3	96	33.747	Caenorhabditis_elegans
YCR057C	PWP2	92	43.927	ENSCJAG00000005570	-	95	43.665	Callithrix_jacchus
YCR057C	PWP2	94	42.514	ENSCAFG00000010687	-	98	42.747	Canis_familiaris
YCR057C	PWP2	77	42.292	ENSCAFG00020019199	-	89	42.573	Canis_lupus_dingo
YCR057C	PWP2	92	40.468	ENSCHIG00000026362	-	98	40.611	Capra_hircus
YCR057C	PWP2	96	43.445	ENSTSYG00000009022	-	95	44.558	Carlito_syrichta
YCR057C	PWP2	96	43.511	ENSCAPG00000017934	-	95	44.710	Cavia_aperea
YCR057C	PWP2	96	43.764	ENSCPOG00000023616	-	95	44.633	Cavia_porcellus
YCR057C	PWP2	92	44.104	ENSCCAG00000034616	-	95	43.878	Cebus_capucinus
YCR057C	PWP2	92	43.679	ENSCATG00000032550	-	98	42.998	Cercocebus_atys
YCR057C	PWP2	97	43.662	ENSCLAG00000009503	-	96	45.011	Chinchilla_lanigera
YCR057C	PWP2	92	43.679	ENSCSAG00000007903	-	98	43.107	Chlorocebus_sabaeus
YCR057C	PWP2	92	44.407	ENSCPBG00000018335	-	96	43.842	Chrysemys_picta_bellii
YCR057C	PWP2	94	42.081	ENSCSAVG00000004186	-	99	42.111	Ciona_savignyi
YCR057C	PWP2	92	43.729	ENSCANG00000028013	-	98	43.297	Colobus_angolensis_palliatus
YCR057C	PWP2	96	43.398	ENSCGRG00001020074	Pwp2	99	43.703	Cricetulus_griseus_chok1gshd
YCR057C	PWP2	96	43.398	ENSCGRG00000003750	Pwp2	99	43.703	Cricetulus_griseus_crigri
YCR057C	PWP2	90	43.823	ENSCSEG00000000861	pwp2h	98	42.746	Cynoglossus_semilaevis
YCR057C	PWP2	92	43.488	ENSCVAG00000000996	pwp2h	96	43.715	Cyprinodon_variegatus
YCR057C	PWP2	95	41.524	ENSDARG00000037109	pwp2h	92	43.414	Danio_rerio
YCR057C	PWP2	78	42.016	ENSDNOG00000012128	-	98	41.804	Dasypus_novemcinctus
YCR057C	PWP2	87	42.683	ENSDORG00000003015	Pwp2	94	41.814	Dipodomys_ordii
YCR057C	PWP2	80	42.819	ENSEBUG00000003140	pwp2h	96	42.254	Eptatretus_burgeri
YCR057C	PWP2	92	43.743	ENSEASG00005001651	-	97	43.654	Equus_asinus_asinus
YCR057C	PWP2	92	43.757	ENSECAG00000006090	-	97	43.873	Equus_caballus
YCR057C	PWP2	97	43.689	ENSELUG00000001878	pwp2h	96	44.695	Esox_lucius
YCR057C	PWP2	92	43.700	ENSFCAG00000004487	-	98	43.612	Felis_catus
YCR057C	PWP2	96	42.500	ENSFALG00000012300	-	96	43.262	Ficedula_albicollis
YCR057C	PWP2	95	43.060	ENSFDAG00000016140	-	98	43.584	Fukomys_damarensis
YCR057C	PWP2	90	44.316	ENSFHEG00000009078	pwp2h	99	44.780	Fundulus_heteroclitus
YCR057C	PWP2	92	43.280	ENSGMOG00000016522	pwp2h	95	43.151	Gadus_morhua
YCR057C	PWP2	95	43.550	ENSGALG00000045726	-	96	43.764	Gallus_gallus
YCR057C	PWP2	95	42.764	ENSGAFG00000011340	pwp2h	96	43.665	Gambusia_affinis
YCR057C	PWP2	92	42.841	ENSGACG00000014928	pwp2h	100	45.488	Gasterosteus_aculeatus
YCR057C	PWP2	96	43.648	ENSGAGG00000005377	-	96	44.068	Gopherus_agassizii
YCR057C	PWP2	92	43.517	ENSGGOG00000041875	-	98	42.842	Gorilla_gorilla
YCR057C	PWP2	95	41.967	ENSHBUG00000005530	pwp2h	96	42.455	Haplochromis_burtoni
YCR057C	PWP2	95	42.780	ENSHGLG00000017401	-	96	43.736	Heterocephalus_glaber_female
YCR057C	PWP2	95	42.952	ENSHGLG00100013888	-	95	43.593	Heterocephalus_glaber_male
YCR057C	PWP2	92	41.395	ENSHCOG00000018121	pwp2h	97	41.345	Hippocampus_comes
YCR057C	PWP2	97	42.994	ENSIPUG00000014074	pwp2h	96	42.984	Ictalurus_punctatus
YCR057C	PWP2	94	43.402	ENSSTOG00000014194	-	98	43.798	Ictidomys_tridecemlineatus
YCR057C	PWP2	97	43.581	ENSJJAG00000013039	Pwp2	95	44.596	Jaculus_jaculus
YCR057C	PWP2	92	43.262	ENSKMAG00000003143	pwp2h	96	43.360	Kryptolebias_marmoratus
YCR057C	PWP2	92	41.176	ENSLBEG00000006388	pwp2h	97	41.222	Labrus_bergylta
YCR057C	PWP2	83	43.179	ENSLACG00000006084	pwp2h	90	42.804	Latimeria_chalumnae
YCR057C	PWP2	92	43.398	ENSLOCG00000003663	pwp2h	95	43.135	Lepisosteus_oculatus
YCR057C	PWP2	90	44.535	ENSLAFG00000003871	-	99	44.535	Loxodonta_africana
YCR057C	PWP2	92	43.567	ENSMFAG00000044448	-	98	42.888	Macaca_fascicularis
YCR057C	PWP2	92	43.567	ENSMMUG00000005271	PWP2	98	42.888	Macaca_mulatta
YCR057C	PWP2	92	43.567	ENSMNEG00000030782	-	98	42.888	Macaca_nemestrina
YCR057C	PWP2	92	43.567	ENSMLEG00000039860	-	98	42.888	Mandrillus_leucophaeus
YCR057C	PWP2	92	42.308	ENSMAMG00000022327	pwp2h	97	43.299	Mastacembelus_armatus
YCR057C	PWP2	92	42.568	ENSMZEG00005015448	pwp2h	96	42.568	Maylandia_zebra
YCR057C	PWP2	96	38.703	ENSMGAG00000014596	-	95	38.920	Meleagris_gallopavo
YCR057C	PWP2	78	56.522	ENSMAUG00000020265	Pwp2	71	57.353	Mesocricetus_auratus
YCR057C	PWP2	95	43.366	ENSMICG00000001002	-	95	44.005	Microcebus_murinus
YCR057C	PWP2	95	43.642	ENSMOCG00000003844	Pwp2	95	44.482	Microtus_ochrogaster
YCR057C	PWP2	90	42.775	ENSMMOG00000000882	pwp2h	98	42.775	Mola_mola
YCR057C	PWP2	95	43.578	ENSMODG00000021081	-	95	44.268	Monodelphis_domestica
YCR057C	PWP2	95	42.421	ENSMALG00000000821	pwp2h	96	42.986	Monopterus_albus
YCR057C	PWP2	96	43.682	MGP_CAROLIEiJ_G0015505	Pwp2	95	44.520	Mus_caroli
YCR057C	PWP2	96	43.634	ENSMUSG00000032834	Pwp2	95	44.470	Mus_musculus
YCR057C	PWP2	95	43.682	MGP_PahariEiJ_G0030918	Pwp2	97	43.867	Mus_pahari
YCR057C	PWP2	96	43.634	MGP_SPRETEiJ_G0016318	Pwp2	95	44.357	Mus_spretus
YCR057C	PWP2	78	41.974	ENSMPUG00000009936	-	97	41.656	Mustela_putorius_furo
YCR057C	PWP2	95	39.126	ENSMLUG00000004823	-	98	39.583	Myotis_lucifugus
YCR057C	PWP2	98	42.599	ENSNGAG00000021106	Pwp2	95	44.118	Nannospalax_galili
YCR057C	PWP2	92	41.639	ENSNBRG00000016527	pwp2h	96	41.528	Neolamprologus_brichardi
YCR057C	PWP2	92	43.115	ENSNLEG00000001928	-	99	43.115	Nomascus_leucogenys
YCR057C	PWP2	97	43.011	ENSODEG00000013073	-	98	44.004	Octodon_degus
YCR057C	PWP2	95	41.967	ENSONIG00000007136	pwp2h	96	42.455	Oreochromis_niloticus
YCR057C	PWP2	92	43.161	ENSOANG00000006477	-	96	43.161	Ornithorhynchus_anatinus
YCR057C	PWP2	97	42.191	ENSORLG00000000066	pwp2h	98	42.969	Oryzias_latipes
YCR057C	PWP2	97	42.191	ENSORLG00020000321	pwp2h	98	42.969	Oryzias_latipes_hni
YCR057C	PWP2	97	39.479	ENSORLG00015014731	pwp2h	98	40.067	Oryzias_latipes_hsok
YCR057C	PWP2	93	41.686	ENSOMEG00000020671	pwp2h	99	41.686	Oryzias_melastigma
YCR057C	PWP2	92	43.694	ENSOGAG00000012473	-	96	43.955	Otolemur_garnettii
YCR057C	PWP2	92	41.601	ENSOARG00000011672	-	98	41.247	Ovis_aries
YCR057C	PWP2	92	43.567	ENSPPAG00000037874	-	98	42.888	Pan_paniscus
YCR057C	PWP2	92	43.778	ENSPPRG00000011088	-	98	43.688	Panthera_pardus
YCR057C	PWP2	92	40.501	ENSPTIG00000020872	-	98	40.442	Panthera_tigris_altaica
YCR057C	PWP2	92	43.567	ENSPTRG00000013969	-	98	42.888	Pan_troglodytes
YCR057C	PWP2	92	43.567	ENSPANG00000006267	-	98	42.951	Papio_anubis
YCR057C	PWP2	91	42.531	ENSPKIG00000002693	pwp2h	99	43.713	Paramormyrops_kingsleyae
YCR057C	PWP2	92	44.773	ENSPSIG00000009783	-	95	44.205	Pelodiscus_sinensis
YCR057C	PWP2	92	43.133	ENSPMGG00000022349	pwp2h	98	42.064	Periophthalmus_magnuspinnatus
YCR057C	PWP2	92	44.319	ENSPEMG00000009968	Pwp2	95	44.257	Peromyscus_maniculatus_bairdii
YCR057C	PWP2	97	42.349	ENSPCIG00000014548	-	96	44.154	Phascolarctos_cinereus
YCR057C	PWP2	92	42.841	ENSPFOG00000014764	pwp2h	96	42.599	Poecilia_formosa
YCR057C	PWP2	92	42.728	ENSPLAG00000011559	pwp2h	96	42.486	Poecilia_latipinna
YCR057C	PWP2	92	43.179	ENSPMEG00000021347	pwp2h	96	42.825	Poecilia_mexicana
YCR057C	PWP2	92	43.517	ENSPREG00000015887	pwp2h	96	43.051	Poecilia_reticulata
YCR057C	PWP2	92	43.864	ENSPPYG00000011478	-	98	42.920	Pongo_abelii
YCR057C	PWP2	95	40.870	ENSPCAG00000004676	-	98	40.573	Procavia_capensis
YCR057C	PWP2	92	44.544	ENSPCOG00000012856	-	98	43.217	Propithecus_coquereli
YCR057C	PWP2	95	39.083	ENSPVAG00000002312	-	98	39.540	Pteropus_vampyrus
YCR057C	PWP2	89	41.690	ENSPNYG00000008379	pwp2h	94	42.313	Pundamilia_nyererei
YCR057C	PWP2	93	42.826	ENSPNAG00000017876	pwp2h	96	42.494	Pygocentrus_nattereri
YCR057C	PWP2	96	43.723	ENSRNOG00000001210	Pwp2	95	44.595	Rattus_norvegicus
YCR057C	PWP2	92	43.878	ENSRBIG00000034365	-	98	42.857	Rhinopithecus_bieti
YCR057C	PWP2	92	43.878	ENSRROG00000031946	-	98	42.857	Rhinopithecus_roxellana
YCR057C	PWP2	92	43.736	ENSSBOG00000034554	-	95	43.473	Saimiri_boliviensis_boliviensis
YCR057C	PWP2	97	42.473	ENSSFOG00015003316	pwp2	96	43.341	Scleropages_formosus
YCR057C	PWP2	92	43.311	ENSSMAG00000011839	pwp2h	95	43.311	Scophthalmus_maximus
YCR057C	PWP2	92	42.386	ENSSDUG00000011462	pwp2h	97	42.475	Seriola_dumerili
YCR057C	PWP2	92	42.599	ENSSLDG00000008651	pwp2h	96	42.667	Seriola_lalandi_dorsalis
YCR057C	PWP2	95	42.444	ENSSPUG00000002980	-	97	42.938	Sphenodon_punctatus
YCR057C	PWP2	92	42.760	ENSSPAG00000023368	pwp2h	95	43.100	Stegastes_partitus
YCR057C	PWP2	94	43.559	ENSSSCG00000029627	-	98	43.764	Sus_scrofa
YCR057C	PWP2	92	43.148	ENSTGUG00000005996	-	99	43.262	Taeniopygia_guttata
YCR057C	PWP2	60	47.016	ENSTGUG00000018216	-	98	47.016	Taeniopygia_guttata
YCR057C	PWP2	94	42.905	ENSTRUG00000013258	pwp2h	98	42.905	Takifugu_rubripes
YCR057C	PWP2	94	43.352	ENSTNIG00000010613	pwp2h	98	43.386	Tetraodon_nigroviridis
YCR057C	PWP2	79	42.884	ENSTBEG00000015597	-	84	42.992	Tupaia_belangeri
YCR057C	PWP2	90	44.614	ENSTTRG00000006728	-	99	44.341	Tursiops_truncatus
YCR057C	PWP2	92	43.277	ENSUAMG00000019031	-	98	42.747	Ursus_americanus
YCR057C	PWP2	92	41.950	ENSUMAG00000025481	-	98	41.429	Ursus_maritimus
YCR057C	PWP2	93	42.794	ENSVVUG00000024125	-	98	42.841	Vulpes_vulpes
YCR057C	PWP2	76	33.333	ENSXETG00000018002	pwp2	98	33.333	Xenopus_tropicalis
YCR057C	PWP2	92	40.837	ENSXCOG00000020474	pwp2h	95	40.816	Xiphophorus_couchianus
YCR057C	PWP2	92	43.778	ENSXMAG00000008124	pwp2h	96	43.651	Xiphophorus_maculatus