EuRBPDB

Description

Ensembl ID: YDL007W (Gene tree)
Gene ID: -
Gene Symbol: RPT2
Alias: YHS4|YTA5
Full Name: ATPase of the 19S regulatory particle of the 26S proteasome%3B one of six ATPases of the regulatory particle%3B involved in the degradation of ubiquitinated substrates%3B required for normal peptide hydrolysis by the core 20S particle%3B N-myristoylation of Rpt2p at Gly2 is involved in regulating the proper intracellular distribution of proteasome activity by controlling the nuclear localization of the 26S proteasome
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 1314
Position: chrIV: 438047-439360
Accession: S000002165
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YDL007W_mRNA	-	1314	-	YDL007W_mRNA	437 (aa)	-	P40327

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YDL007W	RPT2	95	70.673	WBGene00004502	rpt-2	100	68.623	Caenorhabditis_elegans
YDL007W	RPT2	84	51.762	WBGene00004503	rpt-3	89	51.762	Caenorhabditis_elegans
YDL007W	RPT2	77	44.248	WBGene00004501	rpt-1	78	44.118	Caenorhabditis_elegans
YDL007W	RPT2	95	73.317	ENSG00000100764	PSMC1	99	84.337	Homo_sapiens
YDL007W	RPT2	75	49.235	ENSG00000087191	PSMC5	88	49.206	Homo_sapiens
YDL007W	RPT2	68	51.839	ENSG00000165916	PSMC3	75	51.839	Homo_sapiens
YDL007W	RPT2	74	45.427	ENSG00000161057	PSMC2	82	45.289	Homo_sapiens
YDL007W	RPT2	80	43.391	ENSG00000100519	PSMC6	99	45.455	Homo_sapiens
YDL007W	RPT2	86	48.138	YDR394W	RPT3	85	47.527	Saccharomyces_cerevisiae
YDL007W	RPT2	75	49.693	YGL048C	RPT6	80	49.693	Saccharomyces_cerevisiae
YDL007W	RPT2	65	47.887	YKL145W	RPT1	67	45.048	Saccharomyces_cerevisiae