EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YDL033C (Gene tree)
Gene ID: -
Gene Symbol: SLM3
Alias: MTO2|MTU1
Full Name: tRNA-specific 2-thiouridylase%3B responsible for 2-thiolation of the wobble base of mitochondrial tRNAs%3B human homolog TRMU is implicated in myoclonus epilepsy associated with ragged red fibers (MERRF)%2C and can complement yeast null mutant
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 1254 bases
Position: chrIV:392659-393912
Accession: S000002191
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YDL033C_mRNA	tRNA_Me_trans	PF03054.16	1.3e-127	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YDL033C_mRNA	-	1254	-	YDL033C_mRNA	417 (aa)	-	Q12093

Gene Model

Click here to download YDL033C's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YDL033C's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YDL033C	SLM3	91	31.172	ENSG00000100416	TRMU	90	31.172	Homo_sapiens
YDL033C	SLM3	91	33.333	ENSAPOG00000014458	trmu	91	33.333	Acanthochromis_polyacanthus
YDL033C	SLM3	91	33.085	ENSAMEG00000003319	TRMU	91	33.085	Ailuropoda_melanoleuca
YDL033C	SLM3	93	32.518	ENSACIG00000002101	trmu	93	32.518	Amphilophus_citrinellus
YDL033C	SLM3	91	33.251	ENSAOCG00000013155	trmu	91	33.251	Amphiprion_ocellaris
YDL033C	SLM3	91	33.002	ENSAPEG00000013350	trmu	97	31.266	Amphiprion_percula
YDL033C	SLM3	91	33.333	ENSATEG00000007814	trmu	92	33.333	Anabas_testudineus
YDL033C	SLM3	85	32.533	ENSAPLG00000016380	TRMU	90	32.533	Anas_platyrhynchos
YDL033C	SLM3	91	31.750	ENSACAG00000007720	TRMU	90	31.750	Anolis_carolinensis
YDL033C	SLM3	91	31.172	ENSANAG00000038053	TRMU	90	31.172	Aotus_nancymaae
YDL033C	SLM3	94	33.172	ENSACLG00000005395	trmu	97	33.077	Astatotilapia_calliptera
YDL033C	SLM3	91	34.321	ENSAMXG00000005282	trmu	92	34.321	Astyanax_mexicanus
YDL033C	SLM3	91	32.419	ENSBTAG00000005595	TRMU	91	32.419	Bos_taurus
YDL033C	SLM3	92	30.256	WBGene00007114	mttu-1	98	30.256	Caenorhabditis_elegans
YDL033C	SLM3	91	30.673	ENSCJAG00000000198	TRMU	90	30.673	Callithrix_jacchus
YDL033C	SLM3	91	32.170	ENSCAFG00000000779	TRMU	89	32.170	Canis_familiaris
YDL033C	SLM3	91	32.170	ENSCAFG00020009184	TRMU	89	32.170	Canis_lupus_dingo
YDL033C	SLM3	91	32.668	ENSCHIG00000017074	TRMU	91	32.668	Capra_hircus
YDL033C	SLM3	92	33.251	ENSTSYG00000003853	TRMU	90	33.251	Carlito_syrichta
YDL033C	SLM3	89	30.900	ENSCAPG00000013034	TRMU	91	30.900	Cavia_aperea
YDL033C	SLM3	91	32.836	ENSCPOG00000020780	TRMU	90	32.836	Cavia_porcellus
YDL033C	SLM3	91	31.266	ENSCCAG00000021641	TRMU	90	31.266	Cebus_capucinus
YDL033C	SLM3	91	31.920	ENSCATG00000032800	TRMU	90	31.920	Cercocebus_atys
YDL033C	SLM3	91	32.419	ENSCLAG00000017269	TRMU	90	32.419	Chinchilla_lanigera
YDL033C	SLM3	91	31.671	ENSCSAG00000005279	TRMU	90	31.671	Chlorocebus_sabaeus
YDL033C	SLM3	85	31.565	ENSCPBG00000011621	TRMU	88	31.565	Chrysemys_picta_bellii
YDL033C	SLM3	92	30.402	ENSCING00000019371	-	93	30.402	Ciona_intestinalis
YDL033C	SLM3	91	31.172	ENSCANG00000041645	TRMU	90	31.172	Colobus_angolensis_palliatus
YDL033C	SLM3	91	30.923	ENSCGRG00001001739	Trmu	90	30.923	Cricetulus_griseus_chok1gshd
YDL033C	SLM3	91	31.172	ENSCSEG00000012382	trmu	91	31.172	Cynoglossus_semilaevis
YDL033C	SLM3	91	34.243	ENSCVAG00000001366	trmu	91	34.243	Cyprinodon_variegatus
YDL033C	SLM3	91	31.095	ENSDARG00000043734	trmu	91	31.095	Danio_rerio
YDL033C	SLM3	91	32.500	ENSDORG00000007455	Trmu	92	32.500	Dipodomys_ordii
YDL033C	SLM3	90	32.808	FBgn0040337	CG3021	94	33.504	Drosophila_melanogaster
YDL033C	SLM3	92	33.414	ENSEBUG00000007454	trmu	95	33.414	Eptatretus_burgeri
YDL033C	SLM3	91	32.170	ENSEASG00005021725	TRMU	90	32.170	Equus_asinus_asinus
YDL033C	SLM3	91	32.170	ENSECAG00000000467	TRMU	90	32.170	Equus_caballus
YDL033C	SLM3	91	34.243	ENSELUG00000009464	trmu	99	33.505	Esox_lucius
YDL033C	SLM3	91	32.668	ENSFCAG00000006533	TRMU	90	32.668	Felis_catus
YDL033C	SLM3	85	30.570	ENSFALG00000010035	TRMU	91	30.570	Ficedula_albicollis
YDL033C	SLM3	85	31.034	ENSFDAG00000017472	TRMU	89	31.034	Fukomys_damarensis
YDL033C	SLM3	91	34.243	ENSFHEG00000003162	trmu	97	33.420	Fundulus_heteroclitus
YDL033C	SLM3	91	32.029	ENSGALG00000031922	TRMU	91	32.029	Gallus_gallus
YDL033C	SLM3	91	33.831	ENSGAFG00000013331	trmu	84	44.318	Gambusia_affinis
YDL033C	SLM3	93	33.573	ENSGACG00000019024	trmu	93	33.573	Gasterosteus_aculeatus
YDL033C	SLM3	91	30.923	ENSGGOG00000000203	TRMU	90	30.923	Gorilla_gorilla
YDL033C	SLM3	94	33.172	ENSHBUG00000023421	trmu	97	33.077	Haplochromis_burtoni
YDL033C	SLM3	91	32.170	ENSHGLG00000009278	TRMU	90	32.170	Heterocephalus_glaber_female
YDL033C	SLM3	91	32.170	ENSHGLG00100018863	TRMU	90	32.170	Heterocephalus_glaber_male
YDL033C	SLM3	93	33.007	ENSHCOG00000013459	trmu	93	33.007	Hippocampus_comes
YDL033C	SLM3	91	34.152	ENSIPUG00000009785	trmu	93	34.152	Ictalurus_punctatus
YDL033C	SLM3	91	32.419	ENSSTOG00000010993	TRMU	90	32.419	Ictidomys_tridecemlineatus
YDL033C	SLM3	91	32.419	ENSJJAG00000000667	Trmu	91	32.419	Jaculus_jaculus
YDL033C	SLM3	93	33.007	ENSKMAG00000008516	trmu	93	33.007	Kryptolebias_marmoratus
YDL033C	SLM3	93	32.927	ENSLBEG00000018831	trmu	92	32.927	Labrus_bergylta
YDL033C	SLM3	91	31.762	ENSLACG00000013713	TRMU	90	31.762	Latimeria_chalumnae
YDL033C	SLM3	91	32.506	ENSLOCG00000016066	trmu	90	32.506	Lepisosteus_oculatus
YDL033C	SLM3	91	31.671	ENSMFAG00000039767	TRMU	90	31.671	Macaca_fascicularis
YDL033C	SLM3	91	31.671	ENSMMUG00000000807	TRMU	90	31.671	Macaca_mulatta
YDL033C	SLM3	91	31.671	ENSMNEG00000028164	TRMU	90	31.671	Macaca_nemestrina
YDL033C	SLM3	91	31.920	ENSMLEG00000033884	TRMU	90	31.920	Mandrillus_leucophaeus
YDL033C	SLM3	91	33.416	ENSMAMG00000004717	trmu	94	32.990	Mastacembelus_armatus
YDL033C	SLM3	94	33.172	ENSMZEG00005015797	trmu	94	33.172	Maylandia_zebra
YDL033C	SLM3	72	30.395	ENSMGAG00000007550	TRMU	91	30.395	Meleagris_gallopavo
YDL033C	SLM3	91	31.172	ENSMAUG00000022282	Trmu	91	31.172	Mesocricetus_auratus
YDL033C	SLM3	91	31.671	ENSMICG00000029046	TRMU	92	31.671	Microcebus_murinus
YDL033C	SLM3	91	30.923	ENSMOCG00000014641	Trmu	91	30.923	Microtus_ochrogaster
YDL033C	SLM3	92	31.695	ENSMMOG00000007229	trmu	92	31.695	Mola_mola
YDL033C	SLM3	91	31.172	ENSMODG00000007433	TRMU	89	31.172	Monodelphis_domestica
YDL033C	SLM3	91	32.836	ENSMALG00000007721	trmu	91	32.836	Monopterus_albus
YDL033C	SLM3	91	31.172	MGP_CAROLIEiJ_G0020134	Trmu	96	31.068	Mus_caroli
YDL033C	SLM3	91	30.923	ENSMUSG00000022386	Trmu	91	30.923	Mus_musculus
YDL033C	SLM3	91	30.923	MGP_PahariEiJ_G0020139	Trmu	91	30.923	Mus_pahari
YDL033C	SLM3	91	30.923	MGP_SPRETEiJ_G0021031	Trmu	96	31.068	Mus_spretus
YDL033C	SLM3	91	32.419	ENSMPUG00000002523	TRMU	90	32.419	Mustela_putorius_furo
YDL033C	SLM3	91	31.671	ENSNGAG00000005132	Trmu	91	31.671	Nannospalax_galili
YDL033C	SLM3	94	33.172	ENSNBRG00000022690	trmu	96	33.172	Neolamprologus_brichardi
YDL033C	SLM3	91	31.671	ENSNLEG00000015773	TRMU	90	31.671	Nomascus_leucogenys
YDL033C	SLM3	91	31.920	ENSODEG00000014745	TRMU	91	31.762	Octodon_degus
YDL033C	SLM3	94	33.092	ENSONIG00000009821	trmu	94	33.092	Oreochromis_niloticus
YDL033C	SLM3	85	31.398	ENSOANG00000001891	TRMU	89	31.398	Ornithorhynchus_anatinus
YDL033C	SLM3	87	31.937	ENSOCUG00000003664	TRMU	89	32.746	Oryctolagus_cuniculus
YDL033C	SLM3	93	33.333	ENSORLG00000019015	trmu	93	33.333	Oryzias_latipes
YDL033C	SLM3	93	33.333	ENSORLG00020006830	trmu	93	33.333	Oryzias_latipes_hni
YDL033C	SLM3	93	33.333	ENSORLG00015003907	trmu	93	33.333	Oryzias_latipes_hsok
YDL033C	SLM3	59	30.000	ENSOMEG00000015541	trmu	83	30.000	Oryzias_melastigma
YDL033C	SLM3	91	32.918	ENSOGAG00000008096	TRMU	91	32.918	Otolemur_garnettii
YDL033C	SLM3	72	35.000	ENSOARG00000019475	TRMU	75	35.000	Ovis_aries
YDL033C	SLM3	91	31.172	ENSPPAG00000033944	TRMU	90	31.172	Pan_paniscus
YDL033C	SLM3	91	32.668	ENSPPRG00000004197	TRMU	90	32.668	Panthera_pardus
YDL033C	SLM3	62	34.050	ENSPTIG00000014122	TRMU	96	34.050	Panthera_tigris_altaica
YDL033C	SLM3	91	31.172	ENSPTRG00000014510	TRMU	90	31.172	Pan_troglodytes
YDL033C	SLM3	91	31.920	ENSPANG00000023074	TRMU	87	31.920	Papio_anubis
YDL033C	SLM3	91	33.085	ENSPKIG00000002849	trmu	91	33.085	Paramormyrops_kingsleyae
YDL033C	SLM3	84	31.099	ENSPSIG00000013020	TRMU	91	31.099	Pelodiscus_sinensis
YDL033C	SLM3	91	33.990	ENSPMGG00000004083	trmu	91	33.990	Periophthalmus_magnuspinnatus
YDL033C	SLM3	91	31.671	ENSPEMG00000014007	Trmu	91	31.671	Peromyscus_maniculatus_bairdii
YDL033C	SLM3	90	30.402	ENSPCIG00000009923	TRMU	88	30.500	Phascolarctos_cinereus
YDL033C	SLM3	86	32.895	ENSPFOG00000008197	trmu	80	32.895	Poecilia_formosa
YDL033C	SLM3	92	33.911	ENSPLAG00000008414	trmu	92	33.911	Poecilia_latipinna
YDL033C	SLM3	92	33.663	ENSPMEG00000004326	trmu	92	33.663	Poecilia_mexicana
YDL033C	SLM3	91	34.165	ENSPREG00000007980	trmu	91	34.165	Poecilia_reticulata
YDL033C	SLM3	91	30.923	ENSPPYG00000011949	TRMU	90	30.923	Pongo_abelii
YDL033C	SLM3	91	31.671	ENSPCOG00000016539	TRMU	91	31.671	Propithecus_coquereli
YDL033C	SLM3	94	33.172	ENSPNYG00000005629	trmu	94	33.172	Pundamilia_nyererei
YDL033C	SLM3	91	34.158	ENSPNAG00000006339	trmu	89	34.158	Pygocentrus_nattereri
YDL033C	SLM3	91	30.923	ENSRNOG00000016465	Trmu	91	30.923	Rattus_norvegicus
YDL033C	SLM3	91	31.421	ENSRBIG00000038973	TRMU	90	31.421	Rhinopithecus_bieti
YDL033C	SLM3	91	31.671	ENSRROG00000004267	TRMU	90	31.671	Rhinopithecus_roxellana
YDL033C	SLM3	91	30.923	ENSSBOG00000030184	TRMU	90	30.923	Saimiri_boliviensis_boliviensis
YDL033C	SLM3	84	31.099	ENSSFOG00015020664	trmu	91	31.099	Scleropages_formosus
YDL033C	SLM3	93	34.230	ENSSMAG00000019450	trmu	93	34.230	Scophthalmus_maximus
YDL033C	SLM3	91	33.582	ENSSDUG00000011913	trmu	91	33.582	Seriola_dumerili
YDL033C	SLM3	91	33.831	ENSSLDG00000011684	trmu	91	33.831	Seriola_lalandi_dorsalis
YDL033C	SLM3	93	33.820	ENSSPAG00000021875	trmu	93	33.820	Stegastes_partitus
YDL033C	SLM3	91	31.421	ENSSSCG00000000007	TRMU	90	31.421	Sus_scrofa
YDL033C	SLM3	85	31.217	ENSTGUG00000003663	-	94	31.217	Taeniopygia_guttata
YDL033C	SLM3	91	32.338	ENSTRUG00000001231	trmu	92	32.338	Takifugu_rubripes
YDL033C	SLM3	91	33.167	ENSTNIG00000010484	trmu	90	33.167	Tetraodon_nigroviridis
YDL033C	SLM3	91	32.170	ENSTTRG00000004160	TRMU	90	32.170	Tursiops_truncatus
YDL033C	SLM3	69	35.390	ENSUAMG00000024825	TRMU	96	35.390	Ursus_americanus
YDL033C	SLM3	65	32.534	ENSUMAG00000019079	TRMU	98	34.173	Ursus_maritimus
YDL033C	SLM3	91	31.920	ENSVVUG00000024963	TRMU	90	31.920	Vulpes_vulpes
YDL033C	SLM3	91	33.000	ENSXETG00000023304	trmu	89	33.000	Xenopus_tropicalis
YDL033C	SLM3	91	34.321	ENSXCOG00000015105	trmu	91	34.321	Xiphophorus_couchianus
YDL033C	SLM3	91	33.915	ENSXMAG00000006697	trmu	91	33.915	Xiphophorus_maculatus