EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: YDL036C (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 1389
Position: chrIV:387513-388901
Accession: S000002194
RBP type: canonical RBP
Summary: Mitochondrial tRNA:pseudouridine synthase%3B catalyzes the formation of pseudouridine at position 32 in mitochondrial tRNAs%3B contains an N-terminal mitochondrial targeting sequence%3B PUS9 has a paralog%2C RIB2%2C that arose from the whole genome duplication

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YDL036C_mRNA	PseudoU_synth_2	PF00849.22	2.4e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YDL036C_mRNA	-	1389	-	YDL036C_mRNA	462 (aa)	-	Q12069

Gene Model

Click here to download YDL036C's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YDL036C's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YDL036C	-	78	33.254	YGR169C	-	97	33.014
YDL036C	-	93	61.860	YOL066C	RIB2	73	62.093

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YDL036C	-	60	45.683	ENSG00000166133	RPUSD2	50	45.683	Homo_sapiens
YDL036C	-	63	45.704	ENSAMEG00000016996	RPUSD2	51	45.704	Ailuropoda_melanoleuca
YDL036C	-	79	37.619	ENSACIG00000024029	rpusd2	55	47.482	Amphilophus_citrinellus
YDL036C	-	57	47.566	ENSAPLG00000004723	RPUSD2	63	47.636	Anas_platyrhynchos
YDL036C	-	63	47.603	ENSACAG00000013893	RPUSD2	58	47.603	Anolis_carolinensis
YDL036C	-	63	46.392	ENSANAG00000009691	RPUSD2	51	46.392	Aotus_nancymaae
YDL036C	-	63	46.048	ENSBTAG00000003193	RPUSD2	51	46.048	Bos_taurus
YDL036C	-	79	34.527	WBGene00019498	K07E8.7	98	34.527	Caenorhabditis_elegans
YDL036C	-	61	46.503	ENSCJAG00000020841	RPUSD2	50	46.503	Callithrix_jacchus
YDL036C	-	63	45.017	ENSCAFG00000009165	RPUSD2	51	45.017	Canis_familiaris
YDL036C	-	63	45.017	ENSCAFG00020005849	RPUSD2	51	45.017	Canis_lupus_dingo
YDL036C	-	63	45.704	ENSCHIG00000006152	RPUSD2	51	45.704	Capra_hircus
YDL036C	-	63	45.704	ENSTSYG00000012844	RPUSD2	52	45.704	Carlito_syrichta
YDL036C	-	56	45.174	ENSCAPG00000006895	-	83	45.174	Cavia_aperea
YDL036C	-	63	46.735	ENSCPOG00000013201	RPUSD2	51	46.735	Cavia_porcellus
YDL036C	-	63	46.048	ENSCCAG00000024378	RPUSD2	51	46.048	Cebus_capucinus
YDL036C	-	63	45.017	ENSCATG00000043734	RPUSD2	51	45.017	Cercocebus_atys
YDL036C	-	63	44.674	ENSCLAG00000011862	RPUSD2	52	44.674	Chinchilla_lanigera
YDL036C	-	79	35.934	ENSCSAG00000007538	RPUSD2	55	45.017	Chlorocebus_sabaeus
YDL036C	-	60	48.214	ENSCPBG00000013419	RPUSD2	51	48.214	Chrysemys_picta_bellii
YDL036C	-	59	38.182	ENSCSAVG00000007812	-	88	38.095	Ciona_savignyi
YDL036C	-	63	45.361	ENSCANG00000003659	RPUSD2	51	45.361	Colobus_angolensis_palliatus
YDL036C	-	61	47.203	ENSCGRG00000012348	Rpusd2	50	47.203	Cricetulus_griseus_crigri
YDL036C	-	65	45.246	ENSCSEG00000001953	rpusd2	51	45.246	Cynoglossus_semilaevis
YDL036C	-	63	46.392	ENSDNOG00000047745	RPUSD2	69	40.103	Dasypus_novemcinctus
YDL036C	-	71	44.277	ENSDORG00000009092	Rpusd2	72	44.277	Dipodomys_ordii
YDL036C	-	63	45.704	ENSETEG00000008581	RPUSD2	52	45.704	Echinops_telfairi
YDL036C	-	63	45.704	ENSEASG00005016463	RPUSD2	50	45.704	Equus_asinus_asinus
YDL036C	-	63	45.361	ENSECAG00000024178	RPUSD2	50	45.361	Equus_caballus
YDL036C	-	63	36.770	ENSEEUG00000005132	RPUSD2	53	36.770	Erinaceus_europaeus
YDL036C	-	59	44.322	ENSELUG00000016786	rpusd2	60	39.706	Esox_lucius
YDL036C	-	63	45.361	ENSFCAG00000040796	RPUSD2	51	45.361	Felis_catus
YDL036C	-	60	47.122	ENSFALG00000001122	RPUSD2	61	46.392	Ficedula_albicollis
YDL036C	-	70	43.519	ENSFDAG00000003070	RPUSD2	60	43.519	Fukomys_damarensis
YDL036C	-	61	44.983	ENSGMOG00000011014	rpusd2	58	44.983	Gadus_morhua
YDL036C	-	57	48.689	ENSGALG00000041216	RPUSD2	55	48.727	Gallus_gallus
YDL036C	-	79	37.713	ENSGAFG00000003390	rpusd2	50	46.403	Gambusia_affinis
YDL036C	-	60	47.122	ENSGACG00000008656	rpusd2	52	47.122	Gasterosteus_aculeatus
YDL036C	-	63	47.945	ENSGAGG00000013098	RPUSD2	54	48.432	Gopherus_agassizii
YDL036C	-	60	44.964	ENSGGOG00000006684	RPUSD2	50	44.964	Gorilla_gorilla
YDL036C	-	63	44.674	ENSHGLG00000012765	RPUSD2	52	44.674	Heterocephalus_glaber_female
YDL036C	-	63	44.674	ENSHGLG00100006653	RPUSD2	52	44.674	Heterocephalus_glaber_male
YDL036C	-	63	46.048	ENSSTOG00000025619	RPUSD2	51	46.048	Ictidomys_tridecemlineatus
YDL036C	-	60	47.122	ENSJJAG00000023160	Rpusd2	52	47.122	Jaculus_jaculus
YDL036C	-	59	44.565	ENSLACG00000017338	RPUSD2	59	44.565	Latimeria_chalumnae
YDL036C	-	60	43.165	ENSLOCG00000014755	rpusd2	57	42.756	Lepisosteus_oculatus
YDL036C	-	63	45.017	ENSLAFG00000015588	RPUSD2	53	45.017	Loxodonta_africana
YDL036C	-	63	45.017	ENSMFAG00000045062	RPUSD2	51	45.017	Macaca_fascicularis
YDL036C	-	63	45.017	ENSMMUG00000001483	RPUSD2	51	45.017	Macaca_mulatta
YDL036C	-	63	39.116	ENSMNEG00000041429	RPUSD2	51	39.116	Macaca_nemestrina
YDL036C	-	58	47.212	ENSMZEG00005006947	rpusd2	52	46.043	Maylandia_zebra
YDL036C	-	57	48.689	ENSMGAG00000003058	RPUSD2	59	48.727	Meleagris_gallopavo
YDL036C	-	61	46.853	ENSMAUG00000020467	Rpusd2	50	46.853	Mesocricetus_auratus
YDL036C	-	63	46.048	ENSMICG00000028637	RPUSD2	51	46.048	Microcebus_murinus
YDL036C	-	61	47.552	ENSMOCG00000020061	Rpusd2	50	47.552	Microtus_ochrogaster
YDL036C	-	60	44.444	ENSMODG00000000300	RPUSD2	51	44.444	Monodelphis_domestica
YDL036C	-	61	46.853	MGP_CAROLIEiJ_G0024130	Rpusd2	50	46.853	Mus_caroli
YDL036C	-	61	46.853	ENSMUSG00000027324	Rpusd2	50	46.853	Mus_musculus
YDL036C	-	61	46.853	MGP_PahariEiJ_G0025573	Rpusd2	50	46.853	Mus_pahari
YDL036C	-	61	46.853	MGP_SPRETEiJ_G0025046	Rpusd2	50	46.853	Mus_spretus
YDL036C	-	73	40.688	ENSMPUG00000008517	RPUSD2	61	40.688	Mustela_putorius_furo
YDL036C	-	63	45.704	ENSMLUG00000007971	RPUSD2	55	45.704	Myotis_lucifugus
YDL036C	-	63	46.048	ENSNGAG00000014126	Rpusd2	51	46.048	Nannospalax_galili
YDL036C	-	60	45.878	ENSNLEG00000035735	RPUSD2	50	45.878	Nomascus_leucogenys
YDL036C	-	60	45.161	ENSMEUG00000008500	RPUSD2	53	45.161	Notamacropus_eugenii
YDL036C	-	79	36.993	ENSOPRG00000014177	-	57	44.479	Ochotona_princeps
YDL036C	-	63	45.704	ENSODEG00000017193	RPUSD2	53	45.704	Octodon_degus
YDL036C	-	77	38.084	ENSONIG00000020102	rpusd2	80	37.838	Oreochromis_niloticus
YDL036C	-	55	45.349	ENSOANG00000011262	-	99	45.349	Ornithorhynchus_anatinus
YDL036C	-	71	44.411	ENSOCUG00000015745	RPUSD2	56	44.411	Oryctolagus_cuniculus
YDL036C	-	63	46.048	ENSORLG00000015516	rpusd2	52	46.048	Oryzias_latipes
YDL036C	-	63	46.048	ENSORLG00020010533	rpusd2	52	46.048	Oryzias_latipes_hni
YDL036C	-	60	46.763	ENSORLG00015009206	rpusd2	53	45.238	Oryzias_latipes_hsok
YDL036C	-	63	46.048	ENSOGAG00000004867	RPUSD2	54	46.048	Otolemur_garnettii
YDL036C	-	63	46.048	ENSOARG00000020235	RPUSD2	51	46.048	Ovis_aries
YDL036C	-	60	45.683	ENSPPAG00000032874	RPUSD2	50	45.683	Pan_paniscus
YDL036C	-	63	45.361	ENSPPRG00000010446	RPUSD2	51	45.361	Panthera_pardus
YDL036C	-	63	45.361	ENSPTIG00000013316	RPUSD2	51	45.361	Panthera_tigris_altaica
YDL036C	-	60	45.683	ENSPTRG00000006924	RPUSD2	50	45.683	Pan_troglodytes
YDL036C	-	63	45.017	ENSPANG00000019339	RPUSD2	51	45.017	Papio_anubis
YDL036C	-	77	39.623	ENSPMGG00000018165	rpusd2	69	39.353	Periophthalmus_magnuspinnatus
YDL036C	-	61	46.503	ENSPEMG00000012878	Rpusd2	52	46.503	Peromyscus_maniculatus_bairdii
YDL036C	-	79	37.913	ENSPCIG00000023199	RPUSD2	53	45.161	Phascolarctos_cinereus
YDL036C	-	60	47.122	ENSPFOG00000006829	rpusd2	50	47.122	Poecilia_formosa
YDL036C	-	60	47.122	ENSPLAG00000022914	rpusd2	57	47.122	Poecilia_latipinna
YDL036C	-	59	47.619	ENSPMEG00000009835	rpusd2	56	47.619	Poecilia_mexicana
YDL036C	-	60	46.403	ENSPPYG00000006355	RPUSD2	50	46.403	Pongo_abelii
YDL036C	-	61	47.163	ENSPCOG00000028019	RPUSD2	50	47.163	Propithecus_coquereli
YDL036C	-	63	46.048	ENSPVAG00000001837	RPUSD2	51	46.048	Pteropus_vampyrus
YDL036C	-	79	38.107	ENSPNYG00000021507	rpusd2	55	46.403	Pundamilia_nyererei
YDL036C	-	61	46.853	ENSRNOG00000010528	LOC100911166	50	46.853	Rattus_norvegicus
YDL036C	-	61	46.853	ENSRNOG00000046797	Rpusd2	50	46.853	Rattus_norvegicus
YDL036C	-	63	45.361	ENSRBIG00000030813	RPUSD2	51	45.361	Rhinopithecus_bieti
YDL036C	-	63	45.017	ENSRROG00000026664	RPUSD2	51	45.017	Rhinopithecus_roxellana
YDL036C	-	63	46.392	ENSSBOG00000035031	RPUSD2	51	46.392	Saimiri_boliviensis_boliviensis
YDL036C	-	60	47.842	ENSSMAG00000000903	rpusd2	52	47.842	Scophthalmus_maximus
YDL036C	-	71	42.515	ENSSDUG00000019139	rpusd2	55	42.515	Seriola_dumerili
YDL036C	-	63	46.735	ENSSARG00000002792	RPUSD2	51	46.735	Sorex_araneus
YDL036C	-	59	49.458	ENSSPUG00000001206	RPUSD2	54	48.936	Sphenodon_punctatus
YDL036C	-	63	45.017	ENSSSCG00000036700	RPUSD2	51	45.017	Sus_scrofa
YDL036C	-	60	46.763	ENSTRUG00000025880	rpusd2	51	46.763	Takifugu_rubripes
YDL036C	-	60	46.975	ENSTNIG00000017329	rpusd2	55	46.975	Tetraodon_nigroviridis
YDL036C	-	63	37.586	ENSTBEG00000007933	RPUSD2	51	37.586	Tupaia_belangeri
YDL036C	-	60	45.907	ENSTTRG00000010585	RPUSD2	50	45.907	Tursiops_truncatus
YDL036C	-	63	46.048	ENSUAMG00000001470	RPUSD2	55	46.048	Ursus_americanus
YDL036C	-	63	45.361	ENSVPAG00000003844	RPUSD2	52	45.361	Vicugna_pacos
YDL036C	-	63	45.361	ENSVVUG00000026590	RPUSD2	51	45.361	Vulpes_vulpes
YDL036C	-	60	49.104	ENSXETG00000015973	rpusd2	59	49.104	Xenopus_tropicalis
YDL036C	-	79	37.956	ENSXMAG00000021821	rpusd2	57	46.763	Xiphophorus_maculatus