EuRBPDB

Description

Ensembl ID: YDL081C (Gene tree)
Gene ID: -
Gene Symbol: RPP1A
Alias: RPLA1
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 321
Position: chrIV:309802-310122
Accession: S000002239
RBP type: canonical RBP
Summary: Ribosomal stalk protein P1 alpha%3B involved in the interaction between translational elongation factors and the ribosome%3B free (non-ribosomal) P1 stimulates the phosphorylation of the eIF2 alpha subunit (Sui2p) by Gcn2p%3B accumulation of P1 in the cytoplasm is regulated by phosphorylation and interaction with the P2 stalk component

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YDL081C_mRNA	Ribosomal_60s	PF00428.19	6.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YDL081C_mRNA	-	321	-	YDL081C_mRNA	106 (aa)	-	P05318

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YDL081C	RPP1A	98	55.238	YDL130W	RPP1B	99	55.238

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YDL081C	RPP1A	99	50.000	WBGene00004409	rla-1	95	49.057	Caenorhabditis_elegans
YDL081C	RPP1A	98	46.154	ENSCSAVG00000007412	-	97	44.231	Ciona_savignyi
YDL081C	RPP1A	100	47.321	FBgn0002593	RpLP1	100	46.429	Drosophila_melanogaster
YDL081C	RPP1A	98	43.119	ENSOMEG00000012182	-	96	45.872	Oryzias_melastigma