EuRBPDB

Description

Ensembl ID: YDL130W (Gene tree)
Gene ID: -
Gene Symbol: RPP1B
Alias: RPL44'|RPLA3
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 622
Position: chrIV:229906-230527
Accession: S000002288
RBP type: canonical RBP
Summary: Ribosomal protein P1 beta%3B component of the ribosomal stalk%2C which is involved in interaction of translational elongation factors with ribosome%3B free (non-ribosomal) P1 stimulates the phosphorylation of the eIF2 alpha subunit (Sui2p) by Gcn2p%3B accumulation is regulated by phosphorylation and interaction with the P2 stalk component

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YDL130W_mRNA	Ribosomal_60s	PF00428.19	1.2e-26	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128
21124907	A screen for RNA binding proteins in yeast indicates dual functions for many enzymes	ProtoArray & yeast	2010 Nov 11	DOI: 10.1371/journal.pone.0015499

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YDL130W_mRNA	-	321	-	YDL130W_mRNA	106 (aa)	-	P10622

Gene Model

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YDL130W	RPP1B	99	55.238	YDL081C	RPP1A	98	55.238