EuRBPDB

Description

Ensembl ID: YDL185W (Gene tree)
Gene ID: -
Gene Symbol: VMA1
Alias: CLS8|TFP1
Full Name: Subunit A of the V1 peripheral membrane domain of V-ATPase%3B protein precursor undergoes self-catalyzed splicing to yield the extein Tfp1p and the intein Vde (PI-SceI)%2C which is a site-specific endonuclease%3B the V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) has eight subunits%3B involved in methionine restriction extension of chronological lifespan in an autophagy-dependent manner
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 3216
Position: chrIV: 126787-130002
Accession: S000002344
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
25173706	Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins	RNPxl.PAR_CL & yeast	2014 Aug 31	Kramer K	DOI: 10.1038/nmeth.3092
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128
23222640	Global analysis of yeast mRNPs	IC & yeast	2012 Dec 9	Mitchell SF	DOI: 10.1038/nsmb.2468

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YDL185W_mRNA	-	3216	-	YDL185W_mRNA	1071 (aa)	-	P17255

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YDL185W	VMA1	59	68.750	WBGene00013025	vha-13	99	68.750	Caenorhabditis_elegans
YDL185W	VMA1	60	65.320	ENSG00000114573	ATP6V1A	100	66.486	Homo_sapiens
YDL185W	VMA1	60	63.696	ENSMUSG00000052459	Atp6v1a	99	63.696	Mus_musculus