EuRBPDB

Description

Ensembl ID: YDR050C (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Triose phosphate isomerase%2C abundant glycolytic enzyme%3B mRNA half-life is regulated by iron availability%3B transcription is controlled by activators Reb1p%2C Gcr1p%2C and Rap1p through binding sites in the 5' non-coding region%3B inhibition of Tpi1p activity by PEP (phosphoenolpyruvate) stimulates redox metabolism in respiring cells%3B E104D mutation in human homolog TPI1 causes a rare autosomal disease%3B human TPI1 can complement yeast null mutant
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 747
Position: chrIV: 555726-556472
Accession: S000002457
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YDR050C_mRNA	-	747	-	YDR050C_mRNA	248 (aa)	-	P00942

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YDR050C	100	54.032	WBGene00006601	tpi-1	100	54.032	Caenorhabditis_elegans
YDR050C	100	56.048	FBgn0086355	Tpi	100	56.048	Drosophila_melanogaster
YDR050C	99	53.036	ENSG00000111669	TPI1	99	58.763	Homo_sapiens
YDR050C	99	52.439	ENSMUSG00000023456	Tpi1	99	56.024	Mus_musculus