EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YDR060W (Gene tree)
Gene ID: -
Gene Symbol: MAK21
Alias: NOC1
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 3078
Position: chrIV:570649-573726
Accession: S000002467
RBP type: canonical RBP
Summary: Constituent of 66S pre-ribosomal particles%3B required for large (60S) ribosomal subunit biogenesis%3B acts as part of a Mak21p-Noc2p-Rrp5p module that associates with nascent pre-rRNA during transcription and has a role in bigenesis of the large ribosomal subunit%3B involved in nuclear export of pre-ribosomes%3B required for maintenance of dsRNA virus%3B homolog of human CAATT-binding protein

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YDR060W_mRNA	CBF	PF03914.17	1.3e-48	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
23222640	Global analysis of yeast mRNPs	IC & yeast	2012 Dec 9	Mitchell SF	DOI: 10.1038/nsmb.2468

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YDR060W_mRNA	-	3078	-	YDR060W_mRNA	1025 (aa)	-	Q12176

Gene Model

Click here to download YDR060W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YDR060W's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YDR060W	MAK21	63	31.818	ENSAPOG00000010013	cebpz	60	31.824	Acanthochromis_polyacanthus
YDR060W	MAK21	81	30.273	ENSAMEG00000017580	CEBPZ	58	33.382	Ailuropoda_melanoleuca
YDR060W	MAK21	63	32.057	ENSAOCG00000007301	cebpz	60	32.050	Amphiprion_ocellaris
YDR060W	MAK21	61	31.370	ENSATEG00000001538	cebpz	67	31.003	Anabas_testudineus
YDR060W	MAK21	72	32.988	ENSAPLG00000014239	CEBPZ	62	33.684	Anas_platyrhynchos
YDR060W	MAK21	57	33.858	ENSACAG00000001411	CEBPZ	58	33.383	Anolis_carolinensis
YDR060W	MAK21	66	31.874	ENSACLG00000006896	cebpz	55	32.132	Astatotilapia_calliptera
YDR060W	MAK21	65	33.103	ENSAMXG00000018270	cebpz	62	33.333	Astyanax_mexicanus
YDR060W	MAK21	87	30.134	ENSCAFG00000006085	CEBPZ	58	33.480	Canis_familiaris
YDR060W	MAK21	87	30.269	ENSCAFG00020022832	CEBPZ	58	33.676	Canis_lupus_dingo
YDR060W	MAK21	80	30.469	ENSCHIG00000020789	CEBPZ	58	33.041	Capra_hircus
YDR060W	MAK21	76	30.760	ENSTSYG00000005691	CEBPZ	63	32.400	Carlito_syrichta
YDR060W	MAK21	73	31.333	ENSCLAG00000009453	CEBPZ	58	33.676	Chinchilla_lanigera
YDR060W	MAK21	79	31.126	ENSCPBG00000023684	CEBPZ	63	33.110	Chrysemys_picta_bellii
YDR060W	MAK21	85	30.245	ENSDARG00000045857	cebpz	65	32.791	Danio_rerio
YDR060W	MAK21	74	30.668	ENSDNOG00000002209	CEBPZ	58	32.840	Dasypus_novemcinctus
YDR060W	MAK21	84	30.374	ENSDORG00000027348	Cebpz	58	33.580	Dipodomys_ordii
YDR060W	MAK21	59	33.384	ENSETEG00000002400	CEBPZ	61	33.136	Echinops_telfairi
YDR060W	MAK21	86	30.155	ENSFCAG00000015764	CEBPZ	60	33.921	Felis_catus
YDR060W	MAK21	66	32.973	ENSFALG00000011758	CEBPZ	64	33.333	Ficedula_albicollis
YDR060W	MAK21	50	34.545	ENSFHEG00000012867	cebpz	73	32.982	Fundulus_heteroclitus
YDR060W	MAK21	52	31.570	ENSGMOG00000017880	cebpz	55	32.526	Gadus_morhua
YDR060W	MAK21	72	31.133	ENSGALG00000040335	CEBPZ	58	33.089	Gallus_gallus
YDR060W	MAK21	65	30.780	ENSGACG00000011855	cebpz	64	31.287	Gasterosteus_aculeatus
YDR060W	MAK21	92	30.068	ENSGGOG00000011349	CEBPZ	63	33.185	Gorilla_gorilla
YDR060W	MAK21	66	31.874	ENSHBUG00000004917	cebpz	55	32.132	Haplochromis_burtoni
YDR060W	MAK21	71	30.719	ENSHCOG00000012132	cebpz	62	33.891	Hippocampus_comes
YDR060W	MAK21	62	33.143	ENSIPUG00000006584	cebpz	57	33.735	Ictalurus_punctatus
YDR060W	MAK21	64	32.102	ENSKMAG00000001280	cebpz	62	32.244	Kryptolebias_marmoratus
YDR060W	MAK21	68	32.937	ENSLACG00000012928	CEBPZ	63	33.238	Latimeria_chalumnae
YDR060W	MAK21	63	32.208	ENSLOCG00000016867	cebpz	60	31.857	Lepisosteus_oculatus
YDR060W	MAK21	66	31.874	ENSMZEG00005013159	cebpz	57	32.221	Maylandia_zebra
YDR060W	MAK21	64	32.539	ENSMGAG00000011280	CEBPZ	58	33.139	Meleagris_gallopavo
YDR060W	MAK21	60	33.383	ENSMAUG00000008610	Cebpz	59	33.530	Mesocricetus_auratus
YDR060W	MAK21	78	30.857	ENSMICG00000003324	CEBPZ	64	33.819	Microcebus_murinus
YDR060W	MAK21	57	31.719	ENSMMOG00000017553	cebpz	57	32.385	Mola_mola
YDR060W	MAK21	74	31.280	ENSMODG00000023074	CEBPZ	58	32.996	Monodelphis_domestica
YDR060W	MAK21	74	30.964	MGP_CAROLIEiJ_G0021891	-	53	34.615	Mus_caroli
YDR060W	MAK21	87	30.218	ENSMPUG00000010216	CEBPZ	56	33.579	Mustela_putorius_furo
YDR060W	MAK21	66	31.924	ENSONIG00000018713	cebpz	58	32.272	Oreochromis_niloticus
YDR060W	MAK21	78	30.892	ENSOANG00000005120	CEBPZ	58	34.842	Ornithorhynchus_anatinus
YDR060W	MAK21	69	33.623	ENSORLG00000017177	cebpz	62	33.023	Oryzias_latipes
YDR060W	MAK21	69	34.870	ENSORLG00020001900	cebpz	62	32.987	Oryzias_latipes_hni
YDR060W	MAK21	78	30.173	ENSORLG00015019923	cebpz	52	38.725	Oryzias_latipes_hsok
YDR060W	MAK21	81	30.383	ENSOARG00000009540	CEBPZ	58	32.845	Ovis_aries
YDR060W	MAK21	74	32.113	ENSPPAG00000043370	CEBPZ	59	33.333	Pan_paniscus
YDR060W	MAK21	81	30.626	ENSPPRG00000003326	CEBPZ	58	34.361	Panthera_pardus
YDR060W	MAK21	81	30.516	ENSPTIG00000014858	CEBPZ	58	34.214	Panthera_tigris_altaica
YDR060W	MAK21	74	32.113	ENSPTRG00000011836	CEBPZ	59	33.333	Pan_troglodytes
YDR060W	MAK21	63	34.294	ENSPKIG00000023192	cebpz	57	34.718	Paramormyrops_kingsleyae
YDR060W	MAK21	81	31.027	ENSPSIG00000006455	CEBPZ	64	33.651	Pelodiscus_sinensis
YDR060W	MAK21	58	33.333	ENSPMGG00000017825	cebpz	59	33.333	Periophthalmus_magnuspinnatus
YDR060W	MAK21	81	30.110	ENSPEMG00000017978	Cebpz	60	33.676	Peromyscus_maniculatus_bairdii
YDR060W	MAK21	78	30.068	ENSPCIG00000007283	CEBPZ	58	32.706	Phascolarctos_cinereus
YDR060W	MAK21	68	35.897	ENSPFOG00000003831	cebpz	59	35.897	Poecilia_formosa
YDR060W	MAK21	66	31.394	ENSPVAG00000013834	CEBPZ	59	32.456	Pteropus_vampyrus
YDR060W	MAK21	64	31.837	ENSPNYG00000001483	cebpz	60	32.701	Pundamilia_nyererei
YDR060W	MAK21	63	33.333	ENSPNAG00000010829	cebpz	61	33.014	Pygocentrus_nattereri
YDR060W	MAK21	68	31.812	ENSSDUG00000013019	cebpz	61	32.119	Seriola_dumerili
YDR060W	MAK21	69	31.572	ENSSLDG00000021173	cebpz	61	32.162	Seriola_lalandi_dorsalis
YDR060W	MAK21	81	30.401	ENSSPUG00000017394	CEBPZ	64	32.928	Sphenodon_punctatus
YDR060W	MAK21	81	30.187	ENSSSCG00000008493	CEBPZ	59	33.333	Sus_scrofa
YDR060W	MAK21	91	30.661	ENSTGUG00000008585	CEBPZ	69	30.891	Taeniopygia_guttata
YDR060W	MAK21	83	30.769	ENSUAMG00000006489	CEBPZ	63	33.832	Ursus_americanus
YDR060W	MAK21	87	30.507	ENSVVUG00000018894	CEBPZ	58	33.828	Vulpes_vulpes
YDR060W	MAK21	78	30.841	ENSXETG00000000654	cebpz	60	33.778	Xenopus_tropicalis