EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
YDR064W (Gene tree)
Gene ID
-
Gene Symbol
RPS13
Alias
RPS13B|RPS13C
Full Name
Protein component of the small (40S) ribosomal subunit%3B homologous to mammalian ribosomal protein S13 and bacterial S15
Gene Type
protein_coding
Species
Saccharomyces_cerevisiae
Status
confidence
Strand
Plus strand
Length
995 bases
Position
chrIV:579458-580452
Accession
S000002471
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
YDR064W_mRNARibosomal_S13_NPF08069.121.8e-2911
YDR064W_mRNARibosomal_S15PF00312.224.4e-1511
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
26632259The RNA-binding proteomes from yeast to man harbour conserved enigmRBPsRIC.PAR_CL & yeast2015 Dec 3Beckmann BMDOI: 10.1038/ncomms10127
26595419Conserved mRNA-binding proteomes in eukaryotic organismsmRBPome & yeast2015 Nov 23Matia Gonzalez AMDOI: 10.1038/nsmb.3128
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
YDR064W_mRNA-456-YDR064W_mRNA151 (aa)-P05756
Gene Model
Click here to download YDR064W's gene model file
Protein-Protein Interaction (PPI)

Clik here to download YDR064W's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
YDR064WRPS139978.000ENSG00000110700RPS139978.000Homo_sapiens
YDR064WRPS139977.333ENSAPOG00000011420rps139977.333Acanthochromis_polyacanthus
YDR064WRPS139976.316ENSAMEG00000002895RPS139976.316Ailuropoda_melanoleuca
YDR064WRPS139976.000ENSACIG00000024123rps139976.000Amphilophus_citrinellus
YDR064WRPS139775.342ENSAOCG00000004688rps138175.342Amphiprion_ocellaris
YDR064WRPS139977.333ENSAPEG00000010993rps139977.333Amphiprion_percula
YDR064WRPS139977.333ENSATEG00000000336rps139977.333Anabas_testudineus
YDR064WRPS139478.169ENSAPLG00000011983RPS139478.169Anas_platyrhynchos
YDR064WRPS139978.000ENSACAG00000000044RPS139978.000Anolis_carolinensis
YDR064WRPS139978.000ENSANAG00000026703-9978.000Aotus_nancymaae
YDR064WRPS139977.333ENSACLG00000022765rps139977.333Astatotilapia_calliptera
YDR064WRPS139974.000ENSAMXG00000035883rps139974.000Astyanax_mexicanus
YDR064WRPS139976.667ENSBTAG00000003937-9976.667Bos_taurus
YDR064WRPS139978.000ENSBTAG00000040308RPS139978.000Bos_taurus
YDR064WRPS138975.556ENSBTAG00000037925-9775.556Bos_taurus
YDR064WRPS1310068.212WBGene00004482rps-1310068.212Caenorhabditis_elegans
YDR064WRPS139978.000ENSCJAG00000009564RPS139978.000Callithrix_jacchus
YDR064WRPS139960.000ENSCHIG00000026828-9960.000Capra_hircus
YDR064WRPS139966.000ENSCHIG00000010764-9966.000Capra_hircus
YDR064WRPS139948.667ENSCHIG00000015210-9948.667Capra_hircus
YDR064WRPS139978.000ENSCHIG00000023276RPS139978.000Capra_hircus
YDR064WRPS139978.000ENSTSYG00000035480-9978.000Carlito_syrichta
YDR064WRPS137060.952ENSTSYG00000033552-8060.952Carlito_syrichta
YDR064WRPS139978.000ENSTSYG00000013114RPS139978.000Carlito_syrichta
YDR064WRPS137961.667ENSTSYG00000033537-7561.667Carlito_syrichta
YDR064WRPS139367.857ENSCPOG00000000023RPS1310067.857Cavia_porcellus
YDR064WRPS139978.000ENSCCAG00000022959RPS139978.000Cebus_capucinus
YDR064WRPS137360.909ENSCATG00000041201-7560.909Cercocebus_atys
YDR064WRPS139978.000ENSCATG00000044705RPS139978.000Cercocebus_atys
YDR064WRPS139975.333ENSCATG00000018658-9975.333Cercocebus_atys
YDR064WRPS139978.000ENSCLAG00000017194RPS139978.000Chinchilla_lanigera
YDR064WRPS139968.667ENSCLAG00000017436-9968.667Chinchilla_lanigera
YDR064WRPS139377.143ENSCSAG00000004762RPS1310077.143Chlorocebus_sabaeus
YDR064WRPS139974.667ENSCSAG00000000301-9974.667Chlorocebus_sabaeus
YDR064WRPS139377.143ENSCHOG00000008721RPS1310077.143Choloepus_hoffmanni
YDR064WRPS139978.000ENSCPBG00000017607RPS139978.000Chrysemys_picta_bellii
YDR064WRPS139974.000ENSCING00000018058rps139974.000Ciona_intestinalis
YDR064WRPS139970.000ENSCSAVG00000004583-9970.000Ciona_savignyi
YDR064WRPS139978.000ENSCANG00000042702RPS139978.000Colobus_angolensis_palliatus
YDR064WRPS137367.273ENSCANG00000028391-7267.273Colobus_angolensis_palliatus
YDR064WRPS139958.824ENSCGRG00001004537-9958.824Cricetulus_griseus_chok1gshd
YDR064WRPS137673.043ENSCGRG00001012396-8573.043Cricetulus_griseus_chok1gshd
YDR064WRPS137557.018ENSCGRG00001007444-8957.018Cricetulus_griseus_chok1gshd
YDR064WRPS139971.333ENSCGRG00001008296-9971.333Cricetulus_griseus_chok1gshd
YDR064WRPS139155.797ENSCGRG00001015179-9755.797Cricetulus_griseus_chok1gshd
YDR064WRPS139978.000ENSCGRG00001014781Rps1310077.143Cricetulus_griseus_chok1gshd
YDR064WRPS137673.043ENSCGRG00000013824-8573.043Cricetulus_griseus_crigri
YDR064WRPS139072.794ENSCGRG00000007450-9872.794Cricetulus_griseus_crigri
YDR064WRPS137557.018ENSCGRG00000008340-8957.018Cricetulus_griseus_crigri
YDR064WRPS139978.000ENSCGRG00000004980Rps139978.000Cricetulus_griseus_crigri
YDR064WRPS139977.333ENSCSEG00000000978rps139977.333Cynoglossus_semilaevis
YDR064WRPS139977.333ENSCVAG00000014949rps139977.333Cyprinodon_variegatus
YDR064WRPS139976.667ENSDARG00000036298rps139976.667Danio_rerio
YDR064WRPS1310058.278ENSDNOG00000035340-10058.278Dasypus_novemcinctus
YDR064WRPS139978.000ENSDNOG00000038925RPS138178.000Dasypus_novemcinctus
YDR064WRPS139953.289ENSDNOG00000032535-9953.289Dasypus_novemcinctus
YDR064WRPS139978.667ENSDORG00000002507Rps139978.667Dipodomys_ordii
YDR064WRPS139972.000FBgn0010265RpS139972.000Drosophila_melanogaster
YDR064WRPS139363.571ENSETEG00000000912RPS1310063.571Echinops_telfairi
YDR064WRPS139976.000ENSEBUG00000009266-9175.172Eptatretus_burgeri
YDR064WRPS139978.000ENSEASG00005006041RPS137478.000Equus_asinus_asinus
YDR064WRPS139971.795ENSECAG00000014928RPS139971.795Equus_caballus
YDR064WRPS139976.000ENSELUG00000003617rps139976.000Esox_lucius
YDR064WRPS139975.333ENSELUG00000009369rps139975.333Esox_lucius
YDR064WRPS139978.000ENSFCAG00000042979RPS139978.000Felis_catus
YDR064WRPS139250.355ENSFCAG00000024804-9950.355Felis_catus
YDR064WRPS139478.169ENSFALG00000000784RPS139678.169Ficedula_albicollis
YDR064WRPS139978.000ENSFDAG00000005067RPS139978.000Fukomys_damarensis
YDR064WRPS136683.000ENSFHEG00000019826rps139383.000Fundulus_heteroclitus
YDR064WRPS139976.000ENSGMOG00000010471rps139976.000Gadus_morhua
YDR064WRPS139978.000ENSGALG00000006096RPS139978.000Gallus_gallus
YDR064WRPS139178.102ENSGAFG00000006288rps139978.102Gambusia_affinis
YDR064WRPS139975.333ENSGACG00000006703rps139975.333Gasterosteus_aculeatus
YDR064WRPS139978.000ENSGAGG00000013712RPS139978.000Gopherus_agassizii
YDR064WRPS137453.153ENSGGOG00000042830-7153.153Gorilla_gorilla
YDR064WRPS139978.000ENSGGOG00000007450RPS139978.000Gorilla_gorilla
YDR064WRPS139977.333ENSHBUG00000009000rps139977.333Haplochromis_burtoni
YDR064WRPS139965.333ENSHGLG00000013099-9965.333Heterocephalus_glaber_female
YDR064WRPS139978.000ENSHGLG00000006388RPS139978.000Heterocephalus_glaber_female
YDR064WRPS139965.333ENSHGLG00000016432-9965.333Heterocephalus_glaber_female
YDR064WRPS137063.810ENSHGLG00000005664-8563.810Heterocephalus_glaber_female
YDR064WRPS139978.000ENSHGLG00100000521RPS139978.000Heterocephalus_glaber_male
YDR064WRPS139965.333ENSHGLG00100008561-9965.333Heterocephalus_glaber_male
YDR064WRPS137063.810ENSHGLG00100016628-8563.810Heterocephalus_glaber_male
YDR064WRPS139965.333ENSHGLG00100009880-9965.333Heterocephalus_glaber_male
YDR064WRPS139977.333ENSHCOG00000017397rps139977.333Hippocampus_comes
YDR064WRPS139976.000ENSIPUG00000004636rps139976.000Ictalurus_punctatus
YDR064WRPS137964.706ENSSTOG00000032362-8764.706Ictidomys_tridecemlineatus
YDR064WRPS139978.000ENSSTOG00000008996RPS139978.000Ictidomys_tridecemlineatus
YDR064WRPS139978.000ENSJJAG00000014986Rps139978.000Jaculus_jaculus
YDR064WRPS139976.000ENSKMAG00000005963rps139976.000Kryptolebias_marmoratus
YDR064WRPS139976.667ENSLBEG00000003582rps139976.667Labrus_bergylta
YDR064WRPS139961.589ENSLACG00000017012-9961.589Latimeria_chalumnae
YDR064WRPS139978.000ENSLOCG00000002984rps139978.000Lepisosteus_oculatus
YDR064WRPS139978.000ENSLAFG00000026881RPS139978.000Loxodonta_africana
YDR064WRPS139966.225ENSMFAG00000036526-9966.225Macaca_fascicularis
YDR064WRPS139976.000ENSMFAG00000026839-9976.000Macaca_fascicularis
YDR064WRPS139978.000ENSMFAG00000032124RPS139978.000Macaca_fascicularis
YDR064WRPS139972.000ENSMFAG00000031871-9972.000Macaca_fascicularis
YDR064WRPS139978.000ENSMMUG00000022547RPS139978.000Macaca_mulatta
YDR064WRPS137370.909ENSMMUG00000030947-7370.909Macaca_mulatta
YDR064WRPS139975.333ENSMMUG00000032342-9975.333Macaca_mulatta
YDR064WRPS139965.563ENSMMUG00000032402-9965.563Macaca_mulatta
YDR064WRPS139970.000ENSMMUG00000030324-9970.000Macaca_mulatta
YDR064WRPS137368.182ENSMNEG00000039930-7668.182Macaca_nemestrina
YDR064WRPS139974.000ENSMNEG00000009507-9974.000Macaca_nemestrina
YDR064WRPS137373.636ENSMNEG00000032920-9666.000Macaca_nemestrina
YDR064WRPS137359.091ENSMNEG00000031166-7559.091Macaca_nemestrina
YDR064WRPS139978.000ENSMNEG00000043614RPS139978.000Macaca_nemestrina
YDR064WRPS139978.000ENSMLEG00000035302RPS139978.000Mandrillus_leucophaeus
YDR064WRPS139962.667ENSMLEG00000038639-9962.667Mandrillus_leucophaeus
YDR064WRPS139977.333ENSMAMG00000023002rps139977.333Mastacembelus_armatus
YDR064WRPS139977.333ENSMZEG00005012076rps139977.333Maylandia_zebra
YDR064WRPS138380.952ENSMGAG00000006867RPS139980.952Meleagris_gallopavo
YDR064WRPS139978.000ENSMAUG00000013319Rps139978.000Mesocricetus_auratus
YDR064WRPS139978.000ENSMICG00000031241RPS139978.000Microcebus_murinus
YDR064WRPS137564.912ENSMICG00000003716-7364.912Microcebus_murinus
YDR064WRPS139978.000ENSMOCG00000019112Rps139978.000Microtus_ochrogaster
YDR064WRPS139962.667ENSMOCG00000009777-9962.667Microtus_ochrogaster
YDR064WRPS139975.333ENSMOCG00000002897-9975.333Microtus_ochrogaster
YDR064WRPS139471.831ENSMOCG00000016742-9771.831Microtus_ochrogaster
YDR064WRPS139975.333ENSMOCG00000006770-9975.333Microtus_ochrogaster
YDR064WRPS139953.333ENSMOCG00000013225-9953.333Microtus_ochrogaster
YDR064WRPS139972.000ENSMMOG00000020407rps139972.000Mola_mola
YDR064WRPS139976.667ENSMODG00000007078RPS139976.667Monodelphis_domestica
YDR064WRPS139376.429ENSMALG00000011491rps1310076.429Monopterus_albus
YDR064WRPS139978.000MGP_CAROLIEiJ_G0030356Rps1310077.143Mus_caroli
YDR064WRPS139978.000ENSMUSG00000090862Rps1310077.143Mus_musculus
YDR064WRPS139978.000MGP_PahariEiJ_G0013567Rps1310077.143Mus_pahari
YDR064WRPS139978.000MGP_SPRETEiJ_G0031471Rps1310077.143Mus_spretus
YDR064WRPS139978.000ENSMPUG00000018867-9978.000Mustela_putorius_furo
YDR064WRPS139978.000ENSMPUG00000013316RPS139978.000Mustela_putorius_furo
YDR064WRPS139974.667ENSMLUG00000024960-9974.667Myotis_lucifugus
YDR064WRPS139978.000ENSMLUG00000009751RPS139978.000Myotis_lucifugus
YDR064WRPS138167.213ENSNGAG00000017845-8867.213Nannospalax_galili
YDR064WRPS138262.400ENSNGAG00000020126-8962.400Nannospalax_galili
YDR064WRPS1310064.238ENSNGAG00000011864-10064.238Nannospalax_galili
YDR064WRPS139156.204ENSNGAG00000020506-9756.204Nannospalax_galili
YDR064WRPS139956.667ENSNGAG00000021918-9956.667Nannospalax_galili
YDR064WRPS139977.333ENSNBRG00000015738rps1310076.429Neolamprologus_brichardi
YDR064WRPS139978.000ENSNLEG00000029985RPS139978.000Nomascus_leucogenys
YDR064WRPS137353.636ENSNLEG00000032166-7053.636Nomascus_leucogenys
YDR064WRPS137959.677ENSNLEG00000032854-8059.677Nomascus_leucogenys
YDR064WRPS139562.238ENSNLEG00000035285-9862.238Nomascus_leucogenys
YDR064WRPS137074.528ENSNLEG00000012076-7174.528Nomascus_leucogenys
YDR064WRPS139976.000ENSMEUG00000014986RPS139976.000Notamacropus_eugenii
YDR064WRPS139978.000ENSOPRG00000000162RPS139978.000Ochotona_princeps
YDR064WRPS139966.667ENSODEG00000014382-9966.667Octodon_degus
YDR064WRPS139977.333ENSODEG00000020081-9977.333Octodon_degus
YDR064WRPS139976.667ENSODEG00000019345-9976.667Octodon_degus
YDR064WRPS139978.000ENSODEG00000009296-9978.000Octodon_degus
YDR064WRPS139978.000ENSODEG00000020086-9978.000Octodon_degus
YDR064WRPS139976.000ENSODEG00000019422-9976.000Octodon_degus
YDR064WRPS139977.333ENSOANG00000007687RPS139977.333Ornithorhynchus_anatinus
YDR064WRPS139978.000ENSOCUG00000005536RPS139978.000Oryctolagus_cuniculus
YDR064WRPS139976.000ENSORLG00000001289rps139976.000Oryzias_latipes
YDR064WRPS139976.000ENSORLG00020002773rps139976.000Oryzias_latipes_hni
YDR064WRPS139976.000ENSORLG00015016928rps139976.000Oryzias_latipes_hsok
YDR064WRPS139976.000ENSOMEG00000003476rps139976.000Oryzias_melastigma
YDR064WRPS139976.974ENSOGAG00000002128RPS139976.974Otolemur_garnettii
YDR064WRPS139972.667ENSOARG00000001079-9972.667Ovis_aries
YDR064WRPS139976.471ENSOARG00000004920RPS139976.471Ovis_aries
YDR064WRPS139969.737ENSOARG00000003281-9969.737Ovis_aries
YDR064WRPS139970.667ENSOARG00000010091-9970.667Ovis_aries
YDR064WRPS139970.667ENSPPAG00000043780-9970.667Pan_paniscus
YDR064WRPS139660.000ENSPPAG00000044087-9760.606Pan_paniscus
YDR064WRPS139978.000ENSPPAG00000039874RPS139978.000Pan_paniscus
YDR064WRPS139978.000ENSPPRG00000005193RPS139978.000Panthera_pardus
YDR064WRPS139747.945ENSPPRG00000005104-9647.945Panthera_pardus
YDR064WRPS138955.224ENSPPRG00000006929-9255.224Panthera_pardus
YDR064WRPS139978.000ENSPTIG00000021592RPS139978.000Panthera_tigris_altaica
YDR064WRPS139978.000ENSPTRG00000044626RPS139978.000Pan_troglodytes
YDR064WRPS139960.667ENSPTRG00000003397-9960.667Pan_troglodytes
YDR064WRPS137565.487ENSPANG00000032958-7265.487Papio_anubis
YDR064WRPS139978.000ENSPANG00000033142RPS139978.000Papio_anubis
YDR064WRPS136870.874ENSPANG00000002728-7270.874Papio_anubis
YDR064WRPS139977.333ENSPKIG00000015485-9977.333Paramormyrops_kingsleyae
YDR064WRPS139976.000ENSPKIG00000023950rps139976.000Paramormyrops_kingsleyae
YDR064WRPS139478.169ENSPSIG00000011895RPS139578.169Pelodiscus_sinensis
YDR064WRPS138776.515ENSPMGG00000021573rps139476.515Periophthalmus_magnuspinnatus
YDR064WRPS1310074.834ENSPEMG00000013389-8974.834Peromyscus_maniculatus_bairdii
YDR064WRPS139969.079ENSPMAG00000001957RPS139969.079Petromyzon_marinus
YDR064WRPS139864.189ENSPCIG00000018429-8564.189Phascolarctos_cinereus
YDR064WRPS139976.667ENSPCIG00000013612RPS1310075.714Phascolarctos_cinereus
YDR064WRPS139977.333ENSPFOG00000017379rps139977.333Poecilia_formosa
YDR064WRPS139977.333ENSPLAG00000017624rps139977.333Poecilia_latipinna
YDR064WRPS139976.000ENSPMEG00000015411rps139976.000Poecilia_mexicana
YDR064WRPS139976.000ENSPREG00000004718rps139976.000Poecilia_reticulata
YDR064WRPS139978.000ENSPPYG00000003456RPS139978.000Pongo_abelii
YDR064WRPS139978.000ENSPCOG00000024432RPS139978.000Propithecus_coquereli
YDR064WRPS139978.000ENSPVAG00000012806RPS139978.000Pteropus_vampyrus
YDR064WRPS139977.333ENSPNYG00000010866rps139977.333Pundamilia_nyererei
YDR064WRPS139976.667ENSPNAG00000015511rps139976.667Pygocentrus_nattereri
YDR064WRPS139974.026ENSRNOG00000048698AABR07048031.19974.026Rattus_norvegicus
YDR064WRPS139978.000ENSRNOG00000028021Rps139978.000Rattus_norvegicus
YDR064WRPS139978.000ENSRBIG00000028294RPS139978.000Rhinopithecus_bieti
YDR064WRPS137359.091ENSRBIG00000021165-7459.091Rhinopithecus_bieti
YDR064WRPS139967.333ENSRBIG00000019960-9967.333Rhinopithecus_bieti
YDR064WRPS1310061.589ENSRROG00000045081-9361.589Rhinopithecus_roxellana
YDR064WRPS139978.000ENSRROG00000037750RPS139978.000Rhinopithecus_roxellana
YDR064WRPS139968.000ENSRROG00000041356-9968.000Rhinopithecus_roxellana
YDR064WRPS137359.459ENSSBOG00000035159-7259.459Saimiri_boliviensis_boliviensis
YDR064WRPS139978.000ENSSBOG00000031967RPS139978.000Saimiri_boliviensis_boliviensis
YDR064WRPS139972.727ENSSHAG00000004052RPS139972.727Sarcophilus_harrisii
YDR064WRPS139977.333ENSSFOG00015012346-9977.333Scleropages_formosus
YDR064WRPS139977.333ENSSFOG00015015170rps139977.333Scleropages_formosus
YDR064WRPS139977.333ENSSMAG00000019296rps139977.333Scophthalmus_maximus
YDR064WRPS139977.333ENSSDUG00000001148rps137577.333Seriola_dumerili
YDR064WRPS138771.970ENSSLDG00000006221-9671.970Seriola_lalandi_dorsalis
YDR064WRPS139977.333ENSSLDG00000003767rps139977.333Seriola_lalandi_dorsalis
YDR064WRPS139978.000ENSSPUG00000007431RPS139978.000Sphenodon_punctatus
YDR064WRPS139977.333ENSSPAG00000021104rps139977.333Stegastes_partitus
YDR064WRPS139978.000ENSSSCG00000013381RPS139978.000Sus_scrofa
YDR064WRPS136655.000ENSSSCG00000028308-9255.000Sus_scrofa
YDR064WRPS138374.603ENSSSCG00000032345-10074.603Sus_scrofa
YDR064WRPS139977.333ENSTRUG00000014967rps139977.333Takifugu_rubripes
YDR064WRPS139977.333ENSTNIG00000003101rps139977.333Tetraodon_nigroviridis
YDR064WRPS139978.000ENSTBEG00000007717RPS139978.000Tupaia_belangeri
YDR064WRPS139978.000ENSTTRG00000016321RPS139978.000Tursiops_truncatus
YDR064WRPS135980.899ENSUAMG00000015957-6680.899Ursus_americanus
YDR064WRPS136239.785ENSUAMG00000026340-9439.785Ursus_americanus
YDR064WRPS139978.000ENSUMAG00000023470RPS139978.000Ursus_maritimus
YDR064WRPS136683.838ENSVPAG00000001463RPS139983.838Vicugna_pacos
YDR064WRPS135450.617ENSVVUG00000023064-8750.617Vulpes_vulpes
YDR064WRPS137164.220ENSXETG00000026454rps1310064.220Xenopus_tropicalis
YDR064WRPS139977.333ENSXMAG00000012360rps139977.333Xiphophorus_maculatus

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