EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YDR083W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 1179
Position: chrIV:612073-613251
Accession: S000002490
RBP type: canonical RBP
Summary: Nucleolar S-adenosylmethionine-dependent rRNA methyltransferase%3B methylates adenine (m1A) of the large subunit (LSU) rRNA at position 645%3B involved in pre-rRNA cleavage at site A2%3B mutation is synthetically lethal with a gar1 mutation%3B deletion disrupts telomere maintenance by influencing the expression of neighboring gene STN1

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YDR083W_mRNA	Methyltransf_8	PF05148.15	1.2e-68	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YDR083W_mRNA	-	1179	-	YDR083W_mRNA	392 (aa)	-	P38961

Gene Model

Click here to download YDR083W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YDR083W's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YDR083W	-	84	33.141	ENSG00000132275	RRP8	76	36.296	Homo_sapiens
YDR083W	-	59	38.627	ENSAMEG00000016307	RRP8	58	35.000	Ailuropoda_melanoleuca
YDR083W	-	81	32.222	ENSANAG00000028524	RRP8	81	34.722	Aotus_nancymaae
YDR083W	-	70	34.066	WBGene00020296	T07A9.8	62	33.333	Caenorhabditis_elegans
YDR083W	-	80	34.513	ENSCJAG00000014012	RRP8	81	34.722	Callithrix_jacchus
YDR083W	-	72	34.884	ENSCAFG00020009685	RRP8	58	35.548	Canis_lupus_dingo
YDR083W	-	71	35.461	ENSCHIG00000019002	RRP8	51	36.525	Capra_hircus
YDR083W	-	72	35.216	ENSTSYG00000003391	RRP8	76	35.766	Carlito_syrichta
YDR083W	-	61	39.004	ENSCAPG00000013284	RRP8	52	39.004	Cavia_aperea
YDR083W	-	82	32.143	ENSCCAG00000035197	RRP8	81	35.417	Cebus_capucinus
YDR083W	-	72	35.667	ENSCATG00000029344	RRP8	61	46.591	Cercocebus_atys
YDR083W	-	72	36.513	ENSCLAG00000016099	RRP8	59	36.513	Chinchilla_lanigera
YDR083W	-	72	35.667	ENSCSAG00000004345	RRP8	58	36.333	Chlorocebus_sabaeus
YDR083W	-	51	38.679	ENSCING00000003281	-	57	38.679	Ciona_intestinalis
YDR083W	-	82	37.758	ENSCSAVG00000006435	-	70	37.500	Ciona_savignyi
YDR083W	-	72	35.333	ENSCANG00000040771	RRP8	61	46.591	Colobus_angolensis_palliatus
YDR083W	-	69	34.643	ENSCGRG00001003103	Rrp8	54	34.643	Cricetulus_griseus_chok1gshd
YDR083W	-	69	34.286	ENSCGRG00000014009	Rrp8	54	34.286	Cricetulus_griseus_crigri
YDR083W	-	58	40.611	ENSCSEG00000007330	rrp8	51	40.611	Cynoglossus_semilaevis
YDR083W	-	72	37.589	ENSDARG00000071652	rrp8	80	37.589	Danio_rerio
YDR083W	-	84	32.571	ENSDORG00000000103	Rrp8	70	33.143	Dipodomys_ordii
YDR083W	-	60	35.319	FBgn0034422	CG7137	54	36.087	Drosophila_melanogaster
YDR083W	-	86	32.869	ENSETEG00000008877	RRP8	61	34.839	Echinops_telfairi
YDR083W	-	85	31.921	ENSEASG00005001761	RRP8	83	34.932	Equus_asinus_asinus
YDR083W	-	59	38.559	ENSFCAG00000015384	RRP8	70	44.000	Felis_catus
YDR083W	-	71	36.429	ENSGMOG00000007188	rrp8	60	36.071	Gadus_morhua
YDR083W	-	63	33.829	ENSGAFG00000012331	rrp8	51	33.829	Gambusia_affinis
YDR083W	-	58	40.611	ENSGACG00000011343	rrp8	56	39.331	Gasterosteus_aculeatus
YDR083W	-	84	33.141	ENSGGOG00000000389	RRP8	81	35.211	Gorilla_gorilla
YDR083W	-	85	32.857	ENSSTOG00000016272	RRP8	63	33.046	Ictidomys_tridecemlineatus
YDR083W	-	85	31.609	ENSJJAG00000020608	-	59	34.884	Jaculus_jaculus
YDR083W	-	71	38.214	ENSLBEG00000019937	rrp8	57	38.214	Labrus_bergylta
YDR083W	-	58	41.921	ENSLACG00000001252	-	50	42.358	Latimeria_chalumnae
YDR083W	-	56	36.323	ENSLOCG00000013776	-	75	36.323	Lepisosteus_oculatus
YDR083W	-	85	33.333	ENSLAFG00000000112	RRP8	63	33.238	Loxodonta_africana
YDR083W	-	72	35.667	ENSMFAG00000046084	RRP8	61	46.591	Macaca_fascicularis
YDR083W	-	72	35.667	ENSMMUG00000007738	RRP8	61	46.591	Macaca_mulatta
YDR083W	-	73	35.294	ENSMNEG00000029648	RRP8	61	46.591	Macaca_nemestrina
YDR083W	-	72	35.667	ENSMLEG00000035110	RRP8	61	46.591	Mandrillus_leucophaeus
YDR083W	-	67	33.688	ENSMAUG00000000324	Rrp8	51	33.688	Mesocricetus_auratus
YDR083W	-	59	39.056	ENSMICG00000038472	RRP8	83	34.932	Microcebus_murinus
YDR083W	-	59	37.768	ENSMUSG00000030888	Rrp8	58	33.887	Mus_musculus
YDR083W	-	72	34.219	MGP_SPRETEiJ_G0031348	Rrp8	58	34.219	Mus_spretus
YDR083W	-	72	35.570	ENSMPUG00000005510	RRP8	58	36.242	Mustela_putorius_furo
YDR083W	-	85	31.897	ENSMLUG00000008938	RRP8	59	35.216	Myotis_lucifugus
YDR083W	-	85	31.143	ENSNGAG00000012450	Rrp8	59	34.106	Nannospalax_galili
YDR083W	-	58	40.175	ENSNBRG00000023416	rrp8	77	36.765	Neolamprologus_brichardi
YDR083W	-	71	32.500	ENSMEUG00000004945	-	81	32.500	Notamacropus_eugenii
YDR083W	-	59	40.773	ENSOPRG00000008052	RRP8	58	36.667	Ochotona_princeps
YDR083W	-	76	34.483	ENSOCUG00000027619	RRP8	63	34.483	Oryctolagus_cuniculus
YDR083W	-	84	32.951	ENSPPAG00000040792	RRP8	76	36.296	Pan_paniscus
YDR083W	-	59	40.343	ENSPPRG00000022654	RRP8	70	44.000	Panthera_pardus
YDR083W	-	59	40.343	ENSPTIG00000011321	RRP8	70	44.000	Panthera_tigris_altaica
YDR083W	-	84	32.853	ENSPTRG00000003297	RRP8	76	36.296	Pan_troglodytes
YDR083W	-	72	35.667	ENSPANG00000006537	RRP8	61	46.591	Papio_anubis
YDR083W	-	84	33.141	ENSPPYG00000003538	RRP8	63	33.718	Pongo_abelii
YDR083W	-	85	32.386	ENSPCAG00000016176	RRP8	58	35.667	Procavia_capensis
YDR083W	-	71	35.599	ENSPCOG00000024627	RRP8	83	34.932	Propithecus_coquereli
YDR083W	-	85	33.046	ENSPVAG00000002420	RRP8	59	35.880	Pteropus_vampyrus
YDR083W	-	59	38.197	ENSRNOG00000018766	Rrp8	90	38.428	Rattus_norvegicus
YDR083W	-	72	36.000	ENSRBIG00000044485	RRP8	61	46.591	Rhinopithecus_bieti
YDR083W	-	72	36.000	ENSRROG00000045322	RRP8	66	45.745	Rhinopithecus_roxellana
YDR083W	-	72	36.213	ENSSBOG00000035280	RRP8	81	34.722	Saimiri_boliviensis_boliviensis
YDR083W	-	68	38.060	ENSSPAG00000006664	rrp8	78	36.296	Stegastes_partitus
YDR083W	-	52	37.321	ENSTGUG00000000591	RRP8	87	35.965	Taeniopygia_guttata
YDR083W	-	69	35.816	ENSTTRG00000004867	RRP8	54	36.525	Tursiops_truncatus
YDR083W	-	72	34.333	ENSUAMG00000025756	RRP8	61	45.455	Ursus_americanus
YDR083W	-	72	34.333	ENSUMAG00000000528	RRP8	56	35.000	Ursus_maritimus
YDR083W	-	85	33.711	ENSVVUG00000024346	RRP8	64	35.110	Vulpes_vulpes
YDR083W	-	58	38.865	ENSXCOG00000006156	rrp8	51	38.865	Xiphophorus_couchianus