EuRBPDB

Description

Ensembl ID: YDR087C (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Essential evolutionarily conserved nucleolar protein%3B necessary for biogenesis of 60S ribosomal subunits and for processing of pre-rRNAs to mature rRNA%3B associated with several distinct 66S pre-ribosomal particles
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 837 bases
Position: chrIV:617470-618306
Accession: S000002494
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YDR087C_mRNA	Nop52	PF05997.12	5.2e-72	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YDR087C_mRNA	-	837	-	YDR087C_mRNA	278 (aa)	-	P35178

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YDR087C	-	63	30.337	ENSACLG00000010281	-	64	30.337	Astatotilapia_calliptera
YDR087C	-	79	30.000	ENSCSAG00000007936	RRP1	50	31.285	Chlorocebus_sabaeus
YDR087C	-	79	33.478	ENSCGRG00001023882	-	51	36.207	Cricetulus_griseus_chok1gshd
YDR087C	-	63	31.461	MGP_CAROLIEiJ_G0021376	Rrp1b	54	35.938	Mus_caroli
YDR087C	-	87	31.496	MGP_PahariEiJ_G0023695	Rrp1b	54	35.938	Mus_pahari
YDR087C	-	87	30.709	MGP_SPRETEiJ_G0022290	Rrp1b	54	35.938	Mus_spretus
YDR087C	-	83	30.041	ENSOANG00000006472	-	50	30.882	Ornithorhynchus_anatinus