EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: YDR243C (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA binding protein%3B involved in RNA isomerization at the 5' splice site and for exchange of U6 for U1 snRNA at the 5' splice site%3B similar to the RNA helicases of the DEAD-box family
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 1767 bases
Position: chrIV:948518-950284
Accession: S000002651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YDR243C_mRNA	ResIII	PF04851.15	5e-07	1	1
YDR243C_mRNA	DEAD	PF00270.29	5.1e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YDR243C_mRNA	-	1767	-	YDR243C_mRNA	588 (aa)	-	P23394

Gene Model

Click here to download YDR243C's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YDR243C's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YDR243C	-	65	36.979	YNL112W	-	66	36.979
YDR243C	-	65	31.538	YMR290C	-	72	31.538
YDR243C	-	62	30.435	YJL138C	TIF2	85	30.435
YDR243C	-	62	30.435	YKR059W	TIF1	85	30.435
YDR243C	-	67	30.049	YDL160C	-	73	30.049
YDR243C	-	68	37.408	YOR204W	DED1	65	37.408
YDR243C	-	66	33.167	YGL171W	-	67	33.167
YDR243C	-	64	34.987	YHR065C	-	71	34.987
YDR243C	-	68	33.251	YDR021W	-	93	33.251
YDR243C	-	60	33.511	YHR169W	-	80	33.511
YDR243C	-	87	35.094	YPL119C	DBP1	80	35.094
YDR243C	-	64	34.817	YLL008W	-	52	34.058
YDR243C	-	60	36.842	YGL078C	-	64	36.842
YDR243C	-	62	31.250	YDR194C	-	56	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YDR243C	-	81	38.848	ENSG00000174243	DDX23	70	37.245	Homo_sapiens
YDR243C	-	81	38.662	ENSAPOG00000003760	ddx23	71	37.075	Acanthochromis_polyacanthus
YDR243C	-	81	38.848	ENSAMEG00000007123	DDX23	70	37.245	Ailuropoda_melanoleuca
YDR243C	-	80	38.837	ENSACIG00000000022	ddx23	76	37.075	Amphilophus_citrinellus
YDR243C	-	81	38.662	ENSAOCG00000017348	ddx23	71	37.075	Amphiprion_ocellaris
YDR243C	-	81	38.662	ENSAPEG00000016857	ddx23	72	37.075	Amphiprion_percula
YDR243C	-	81	38.662	ENSATEG00000016800	ddx23	76	37.094	Anabas_testudineus
YDR243C	-	84	36.101	ENSAPLG00000002868	DDX23	70	35.314	Anas_platyrhynchos
YDR243C	-	81	39.033	ENSACAG00000025589	DDX23	67	37.415	Anolis_carolinensis
YDR243C	-	81	38.848	ENSANAG00000018663	DDX23	70	37.245	Aotus_nancymaae
YDR243C	-	81	38.476	ENSAMXG00000017597	ddx23	75	35.407	Astyanax_mexicanus
YDR243C	-	81	38.848	ENSBTAG00000021810	DDX23	70	37.245	Bos_taurus
YDR243C	-	83	36.330	WBGene00017162	ddx-23	78	34.642	Caenorhabditis_elegans
YDR243C	-	81	38.848	ENSCJAG00000020775	DDX23	70	37.245	Callithrix_jacchus
YDR243C	-	81	38.848	ENSCAFG00000025422	DDX23	70	37.245	Canis_familiaris
YDR243C	-	81	38.848	ENSCAFG00020013383	DDX23	70	37.245	Canis_lupus_dingo
YDR243C	-	81	38.848	ENSCHIG00000018783	DDX23	70	37.245	Capra_hircus
YDR243C	-	81	38.848	ENSTSYG00000005429	DDX23	70	37.245	Carlito_syrichta
YDR243C	-	81	38.848	ENSCPOG00000003278	DDX23	70	37.245	Cavia_porcellus
YDR243C	-	62	39.141	ENSCCAG00000029177	DDX23	62	36.996	Cebus_capucinus
YDR243C	-	80	35.714	ENSCATG00000032335	-	65	35.714	Cercocebus_atys
YDR243C	-	81	38.848	ENSCATG00000039797	DDX23	70	37.245	Cercocebus_atys
YDR243C	-	81	38.848	ENSCLAG00000002986	DDX23	70	37.245	Chinchilla_lanigera
YDR243C	-	81	38.848	ENSCSAG00000006240	DDX23	70	37.245	Chlorocebus_sabaeus
YDR243C	-	64	37.585	ENSCHOG00000009027	DDX23	69	35.787	Choloepus_hoffmanni
YDR243C	-	81	38.361	ENSCPBG00000019988	DDX23	71	37.075	Chrysemys_picta_bellii
YDR243C	-	78	38.846	ENSCING00000001913	-	74	37.094	Ciona_intestinalis
YDR243C	-	88	33.056	ENSCSAVG00000004158	-	93	37.708	Ciona_savignyi
YDR243C	-	81	38.848	ENSCANG00000040182	DDX23	81	37.245	Colobus_angolensis_palliatus
YDR243C	-	90	33.721	ENSCANG00000042510	-	81	33.597	Colobus_angolensis_palliatus
YDR243C	-	81	38.848	ENSCGRG00001015090	Ddx23	70	37.245	Cricetulus_griseus_chok1gshd
YDR243C	-	81	38.848	ENSCGRG00000016314	Ddx23	70	37.245	Cricetulus_griseus_crigri
YDR243C	-	81	38.361	ENSCSEG00000020970	ddx23	71	36.565	Cynoglossus_semilaevis
YDR243C	-	81	38.662	ENSCVAG00000015745	ddx23	72	37.075	Cyprinodon_variegatus
YDR243C	-	81	38.361	ENSDARG00000021945	ddx23	74	35.668	Danio_rerio
YDR243C	-	81	38.848	ENSDNOG00000043176	DDX23	70	37.245	Dasypus_novemcinctus
YDR243C	-	81	38.848	ENSDORG00000012659	Ddx23	70	37.245	Dipodomys_ordii
YDR243C	-	81	40.149	FBgn0032690	CG10333	64	40.149	Drosophila_melanogaster
YDR243C	-	81	38.848	ENSETEG00000015816	DDX23	71	36.717	Echinops_telfairi
YDR243C	-	79	38.636	ENSEBUG00000003319	ddx23	82	37.005	Eptatretus_burgeri
YDR243C	-	81	38.848	ENSEASG00005000455	DDX23	70	37.245	Equus_asinus_asinus
YDR243C	-	81	38.848	ENSECAG00000016681	DDX23	70	37.245	Equus_caballus
YDR243C	-	64	37.585	ENSEEUG00000009658	DDX23	58	35.787	Erinaceus_europaeus
YDR243C	-	80	37.828	ENSELUG00000015358	ddx23	78	35.621	Esox_lucius
YDR243C	-	81	38.848	ENSFCAG00000000082	DDX23	70	37.245	Felis_catus
YDR243C	-	81	38.361	ENSFALG00000000133	DDX23	64	38.662	Ficedula_albicollis
YDR243C	-	81	38.848	ENSFDAG00000017059	DDX23	70	37.245	Fukomys_damarensis
YDR243C	-	79	39.197	ENSFHEG00000017499	ddx23	69	39.197	Fundulus_heteroclitus
YDR243C	-	79	38.432	ENSGMOG00000009592	ddx23	71	36.760	Gadus_morhua
YDR243C	-	81	38.662	ENSGALG00000032307	DDX23	70	37.245	Gallus_gallus
YDR243C	-	81	38.848	ENSGAFG00000012366	ddx23	75	36.482	Gambusia_affinis
YDR243C	-	80	38.993	ENSGACG00000003024	ddx23	87	38.993	Gasterosteus_aculeatus
YDR243C	-	81	38.361	ENSGAGG00000007790	DDX23	71	37.075	Gopherus_agassizii
YDR243C	-	81	38.848	ENSGGOG00000015252	DDX23	86	42.045	Gorilla_gorilla
YDR243C	-	81	38.547	ENSHBUG00000011876	ddx23	65	38.662	Haplochromis_burtoni
YDR243C	-	81	38.848	ENSHGLG00000004292	DDX23	70	37.245	Heterocephalus_glaber_female
YDR243C	-	81	38.848	ENSHGLG00100017585	DDX23	70	37.245	Heterocephalus_glaber_male
YDR243C	-	81	38.476	ENSHCOG00000019338	ddx23	77	36.181	Hippocampus_comes
YDR243C	-	81	38.476	ENSIPUG00000005247	DDX23	71	36.565	Ictalurus_punctatus
YDR243C	-	81	38.848	ENSSTOG00000004219	DDX23	70	37.245	Ictidomys_tridecemlineatus
YDR243C	-	81	38.848	ENSJJAG00000018994	Ddx23	70	37.245	Jaculus_jaculus
YDR243C	-	81	38.848	ENSKMAG00000012060	ddx23	78	36.735	Kryptolebias_marmoratus
YDR243C	-	81	38.662	ENSLBEG00000019475	ddx23	72	37.075	Labrus_bergylta
YDR243C	-	81	39.033	ENSLACG00000016977	DDX23	76	36.905	Latimeria_chalumnae
YDR243C	-	81	39.033	ENSLOCG00000007385	ddx23	70	37.245	Lepisosteus_oculatus
YDR243C	-	81	38.848	ENSLAFG00000014227	DDX23	70	37.245	Loxodonta_africana
YDR243C	-	81	38.848	ENSMFAG00000038666	DDX23	70	37.245	Macaca_fascicularis
YDR243C	-	81	38.848	ENSMMUG00000008432	DDX23	86	42.045	Macaca_mulatta
YDR243C	-	80	35.328	ENSMNEG00000045260	-	80	32.394	Macaca_nemestrina
YDR243C	-	81	38.848	ENSMNEG00000040016	DDX23	70	37.245	Macaca_nemestrina
YDR243C	-	80	36.100	ENSMLEG00000035096	-	82	33.020	Mandrillus_leucophaeus
YDR243C	-	81	38.848	ENSMLEG00000042846	DDX23	70	37.245	Mandrillus_leucophaeus
YDR243C	-	81	38.662	ENSMAMG00000024144	ddx23	74	37.075	Mastacembelus_armatus
YDR243C	-	81	38.547	ENSMZEG00005026086	ddx23	74	36.672	Maylandia_zebra
YDR243C	-	81	38.848	ENSMAUG00000012336	Ddx23	70	37.245	Mesocricetus_auratus
YDR243C	-	81	38.848	ENSMICG00000017541	DDX23	70	37.245	Microcebus_murinus
YDR243C	-	81	38.848	ENSMOCG00000018987	Ddx23	70	37.245	Microtus_ochrogaster
YDR243C	-	81	37.546	ENSMMOG00000012406	ddx23	74	35.823	Mola_mola
YDR243C	-	81	38.848	ENSMODG00000009975	DDX23	70	37.245	Monodelphis_domestica
YDR243C	-	81	39.033	ENSMALG00000022366	ddx23	65	39.033	Monopterus_albus
YDR243C	-	81	38.848	MGP_CAROLIEiJ_G0020240	Ddx23	70	37.245	Mus_caroli
YDR243C	-	81	38.848	ENSMUSG00000003360	Ddx23	70	37.245	Mus_musculus
YDR243C	-	81	38.848	MGP_PahariEiJ_G0020243	Ddx23	70	37.245	Mus_pahari
YDR243C	-	81	38.848	MGP_SPRETEiJ_G0021137	Ddx23	70	37.245	Mus_spretus
YDR243C	-	81	38.848	ENSMPUG00000014739	DDX23	70	37.245	Mustela_putorius_furo
YDR243C	-	81	38.848	ENSMLUG00000003683	-	70	36.905	Myotis_lucifugus
YDR243C	-	81	38.848	ENSMLUG00000011033	-	70	37.245	Myotis_lucifugus
YDR243C	-	81	38.848	ENSNGAG00000019018	Ddx23	70	37.245	Nannospalax_galili
YDR243C	-	80	38.837	ENSNBRG00000022928	ddx23	74	36.565	Neolamprologus_brichardi
YDR243C	-	75	38.415	ENSNLEG00000017864	DDX23	68	36.716	Nomascus_leucogenys
YDR243C	-	81	38.848	ENSMEUG00000009477	DDX23	70	37.245	Notamacropus_eugenii
YDR243C	-	81	38.848	ENSOPRG00000007170	-	70	37.245	Ochotona_princeps
YDR243C	-	81	38.848	ENSODEG00000003592	DDX23	70	37.245	Octodon_degus
YDR243C	-	81	38.547	ENSONIG00000017048	ddx23	65	38.662	Oreochromis_niloticus
YDR243C	-	81	38.848	ENSOCUG00000001414	DDX23	70	37.245	Oryctolagus_cuniculus
YDR243C	-	81	38.476	ENSORLG00000012330	ddx23	74	36.842	Oryzias_latipes
YDR243C	-	81	38.476	ENSORLG00020017586	ddx23	74	36.842	Oryzias_latipes_hni
YDR243C	-	80	38.649	ENSORLG00015012361	ddx23	76	36.842	Oryzias_latipes_hsok
YDR243C	-	81	38.476	ENSOMEG00000006453	ddx23	76	37.158	Oryzias_melastigma
YDR243C	-	81	38.848	ENSOGAG00000016813	DDX23	70	37.245	Otolemur_garnettii
YDR243C	-	81	38.848	ENSOARG00000019105	DDX23	63	37.245	Ovis_aries
YDR243C	-	81	33.603	ENSPPAG00000038775	-	64	33.603	Pan_paniscus
YDR243C	-	81	38.848	ENSPPAG00000037807	DDX23	86	42.045	Pan_paniscus
YDR243C	-	81	38.848	ENSPPRG00000015345	DDX23	70	37.245	Panthera_pardus
YDR243C	-	81	38.848	ENSPTIG00000018873	DDX23	70	37.245	Panthera_tigris_altaica
YDR243C	-	81	35.830	ENSPTRG00000051972	-	63	35.830	Pan_troglodytes
YDR243C	-	81	38.848	ENSPTRG00000004887	DDX23	86	42.045	Pan_troglodytes
YDR243C	-	74	37.143	ENSPANG00000035074	-	79	34.197	Papio_anubis
YDR243C	-	81	38.848	ENSPANG00000019459	DDX23	64	37.245	Papio_anubis
YDR243C	-	81	39.591	ENSPKIG00000024110	ddx23	70	37.691	Paramormyrops_kingsleyae
YDR243C	-	80	35.838	ENSPSIG00000002834	DDX23	63	35.838	Pelodiscus_sinensis
YDR243C	-	80	38.577	ENSPMGG00000010243	ddx23	74	36.395	Periophthalmus_magnuspinnatus
YDR243C	-	81	38.848	ENSPEMG00000011305	Ddx23	70	37.245	Peromyscus_maniculatus_bairdii
YDR243C	-	79	38.403	ENSPMAG00000008625	ddx23	76	36.130	Petromyzon_marinus
YDR243C	-	81	38.848	ENSPCIG00000027691	DDX23	70	37.245	Phascolarctos_cinereus
YDR243C	-	81	38.662	ENSPFOG00000012159	ddx23	74	36.156	Poecilia_formosa
YDR243C	-	81	38.662	ENSPLAG00000005052	ddx23	80	33.172	Poecilia_latipinna
YDR243C	-	81	38.662	ENSPMEG00000015385	ddx23	75	36.156	Poecilia_mexicana
YDR243C	-	81	38.662	ENSPREG00000007074	ddx23	75	36.319	Poecilia_reticulata
YDR243C	-	81	38.848	ENSPPYG00000004468	DDX23	68	37.245	Pongo_abelii
YDR243C	-	81	38.848	ENSPCAG00000002016	DDX23	70	37.245	Procavia_capensis
YDR243C	-	81	38.848	ENSPCOG00000025915	DDX23	86	42.045	Propithecus_coquereli
YDR243C	-	81	38.848	ENSPVAG00000009818	DDX23	70	37.245	Pteropus_vampyrus
YDR243C	-	80	38.837	ENSPNYG00000021038	ddx23	76	36.181	Pundamilia_nyererei
YDR243C	-	81	38.361	ENSPNAG00000019203	ddx23	78	36.348	Pygocentrus_nattereri
YDR243C	-	81	38.848	ENSRNOG00000060154	Ddx23	70	37.245	Rattus_norvegicus
YDR243C	-	82	34.444	ENSRBIG00000036337	-	83	32.303	Rhinopithecus_bieti
YDR243C	-	64	38.889	ENSRBIG00000040362	DDX23	63	38.889	Rhinopithecus_bieti
YDR243C	-	81	38.848	ENSRROG00000028964	DDX23	70	37.245	Rhinopithecus_roxellana
YDR243C	-	82	34.074	ENSRROG00000045747	-	84	31.994	Rhinopithecus_roxellana
YDR243C	-	81	38.848	ENSSBOG00000025799	DDX23	70	37.245	Saimiri_boliviensis_boliviensis
YDR243C	-	81	38.848	ENSSHAG00000006590	DDX23	70	37.245	Sarcophilus_harrisii
YDR243C	-	81	39.219	ENSSFOG00015013273	ddx23	74	36.971	Scleropages_formosus
YDR243C	-	80	38.764	ENSSMAG00000000529	ddx23	77	37.158	Scophthalmus_maximus
YDR243C	-	81	38.662	ENSSDUG00000022459	ddx23	80	36.683	Seriola_dumerili
YDR243C	-	81	38.662	ENSSLDG00000010453	ddx23	71	36.905	Seriola_lalandi_dorsalis
YDR243C	-	69	42.154	ENSSARG00000004534	DDX23	62	42.154	Sorex_araneus
YDR243C	-	81	38.662	ENSSPUG00000016044	DDX23	70	37.075	Sphenodon_punctatus
YDR243C	-	81	38.662	ENSSPAG00000016482	ddx23	71	37.075	Stegastes_partitus
YDR243C	-	81	38.848	ENSSSCG00000000176	DDX23	70	37.245	Sus_scrofa
YDR243C	-	81	38.961	ENSTRUG00000000455	ddx23	78	34.667	Takifugu_rubripes
YDR243C	-	81	38.848	ENSTBEG00000016909	DDX23	70	37.245	Tupaia_belangeri
YDR243C	-	70	42.154	ENSTTRG00000004604	DDX23	63	42.154	Tursiops_truncatus
YDR243C	-	81	38.848	ENSUAMG00000027082	DDX23	70	37.245	Ursus_americanus
YDR243C	-	81	38.848	ENSUMAG00000006538	DDX23	70	37.245	Ursus_maritimus
YDR243C	-	81	38.848	ENSVVUG00000019648	DDX23	70	37.245	Vulpes_vulpes
YDR243C	-	74	42.544	ENSXETG00000009807	ddx23	55	42.544	Xenopus_tropicalis
YDR243C	-	81	38.993	ENSXCOG00000011648	ddx23	75	37.225	Xiphophorus_couchianus
YDR243C	-	81	38.662	ENSXMAG00000017387	ddx23	75	36.319	Xiphophorus_maculatus