EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: YDR312W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Protein required for ribosomal large subunit maturation%3B functionally redundant with Ssf1p%3B member of the Brix family%3B SSF2 has a paralog%2C SSF1%2C that arose from the whole genome duplication
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 1362 bases
Position: chrIV:1087581-1088942
Accession: S000002720
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YDR312W_mRNA	Brix	PF04427.18	3.9e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YDR312W_mRNA	-	1362	-	YDR312W_mRNA	453 (aa)	-	Q12153

Gene Model

Click here to download YDR312W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YDR312W's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YDR312W	-	100	94.040	YHR066W	-	100	94.040

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YDR312W	-	90	35.337	ENSG00000243207	PPAN-P2RY11	67	35.059	Homo_sapiens
YDR312W	-	90	34.856	ENSG00000130810	PPAN	86	48.837	Homo_sapiens
YDR312W	-	99	34.141	ENSAPOG00000017687	ppan	67	34.442	Acanthochromis_polyacanthus
YDR312W	-	99	32.613	ENSAMEG00000011989	-	73	34.541	Ailuropoda_melanoleuca
YDR312W	-	99	36.501	ENSACIG00000007417	ppan	69	37.736	Amphilophus_citrinellus
YDR312W	-	99	33.698	ENSAOCG00000005416	ppan	68	33.958	Amphiprion_ocellaris
YDR312W	-	99	33.921	ENSAPEG00000010382	ppan	68	33.724	Amphiprion_percula
YDR312W	-	99	33.479	ENSATEG00000021221	ppan	69	33.492	Anabas_testudineus
YDR312W	-	99	35.076	ENSACAG00000003838	-	73	34.211	Anolis_carolinensis
YDR312W	-	89	35.381	ENSANAG00000020371	-	75	35.545	Aotus_nancymaae
YDR312W	-	79	33.989	ENSANAG00000038012	-	81	34.426	Aotus_nancymaae
YDR312W	-	99	34.341	ENSACLG00000019215	ppan	71	34.332	Astatotilapia_calliptera
YDR312W	-	94	34.018	ENSAMXG00000032540	ppan	61	34.264	Astyanax_mexicanus
YDR312W	-	99	33.261	ENSBTAG00000012745	PPAN	77	34.670	Bos_taurus
YDR312W	-	89	34.889	ENSCJAG00000039296	PPAN	75	35.071	Callithrix_jacchus
YDR312W	-	93	33.958	ENSCAFG00000017917	P2RY11	71	32.829	Canis_familiaris
YDR312W	-	93	33.958	ENSCAFG00020023621	-	85	33.261	Canis_lupus_dingo
YDR312W	-	99	33.043	ENSCHIG00000006450	-	79	34.353	Capra_hircus
YDR312W	-	93	34.732	ENSCPOG00000025539	-	97	34.332	Cavia_porcellus
YDR312W	-	89	35.872	ENSCCAG00000032527	-	75	35.782	Cebus_capucinus
YDR312W	-	90	34.375	ENSCATG00000040554	-	73	34.123	Cercocebus_atys
YDR312W	-	99	33.766	ENSCLAG00000009362	-	77	35.129	Chinchilla_lanigera
YDR312W	-	92	34.515	ENSCSAG00000007423	-	76	34.515	Chlorocebus_sabaeus
YDR312W	-	96	34.694	ENSCPBG00000005372	-	71	34.014	Chrysemys_picta_bellii
YDR312W	-	93	35.377	ENSCING00000005420	ppan	73	37.302	Ciona_intestinalis
YDR312W	-	98	34.452	ENSCSAVG00000005816	-	80	34.615	Ciona_savignyi
YDR312W	-	77	34.857	ENSCANG00000036259	-	70	34.551	Colobus_angolensis_palliatus
YDR312W	-	99	34.047	ENSCGRG00001015990	Ppan	70	36.041	Cricetulus_griseus_chok1gshd
YDR312W	-	86	34.165	ENSCGRG00000012785	Ppan	66	36.585	Cricetulus_griseus_crigri
YDR312W	-	86	35.476	ENSCSEG00000021023	ppan	59	35.309	Cynoglossus_semilaevis
YDR312W	-	99	35.730	ENSCVAG00000013547	ppan	74	35.667	Cyprinodon_variegatus
YDR312W	-	99	35.512	ENSDARG00000022232	ppan	68	35.731	Danio_rerio
YDR312W	-	78	34.722	ENSDNOG00000047670	-	68	34.795	Dasypus_novemcinctus
YDR312W	-	88	35.062	ENSDORG00000003829	Ppan	98	35.024	Dipodomys_ordii
YDR312W	-	78	31.073	FBgn0010770	ppan	67	31.903	Drosophila_melanogaster
YDR312W	-	92	33.019	ENSETEG00000019286	-	84	32.609	Echinops_telfairi
YDR312W	-	54	38.934	ENSEBUG00000004335	ppan	60	36.496	Eptatretus_burgeri
YDR312W	-	99	32.538	ENSEASG00005010574	-	72	34.541	Equus_asinus_asinus
YDR312W	-	99	32.684	ENSECAG00000024469	-	72	34.541	Equus_caballus
YDR312W	-	99	35.371	ENSELUG00000024160	ppan	68	35.663	Esox_lucius
YDR312W	-	98	32.533	ENSFCAG00000009388	-	72	33.726	Felis_catus
YDR312W	-	99	36.842	ENSFHEG00000001554	ppan	67	37.857	Fundulus_heteroclitus
YDR312W	-	89	33.911	ENSGMOG00000003431	ppan	68	33.898	Gadus_morhua
YDR312W	-	96	31.034	ENSGALG00000051597	-	81	35.393	Gallus_gallus
YDR312W	-	99	35.512	ENSGAFG00000015832	ppan	67	36.342	Gambusia_affinis
YDR312W	-	94	35.321	ENSGACG00000013723	ppan	64	35.930	Gasterosteus_aculeatus
YDR312W	-	96	34.467	ENSGAGG00000009455	-	64	34.828	Gopherus_agassizii
YDR312W	-	79	35.734	ENSGGOG00000039459	PPAN	71	35.422	Gorilla_gorilla
YDR312W	-	99	34.557	ENSHBUG00000021830	ppan	71	34.332	Haplochromis_burtoni
YDR312W	-	96	33.716	ENSHGLG00000006964	-	72	34.550	Heterocephalus_glaber_female
YDR312W	-	96	33.716	ENSHGLG00100011618	-	72	34.550	Heterocephalus_glaber_male
YDR312W	-	70	37.629	ENSHCOG00000016751	ppan	54	41.935	Hippocampus_comes
YDR312W	-	91	36.277	ENSIPUG00000005082	ppan	64	36.277	Ictalurus_punctatus
YDR312W	-	99	33.623	ENSSTOG00000010828	-	72	34.793	Ictidomys_tridecemlineatus
YDR312W	-	99	32.688	ENSJJAG00000016362	Ppan	73	34.300	Jaculus_jaculus
YDR312W	-	99	34.934	ENSKMAG00000016509	ppan	67	34.928	Kryptolebias_marmoratus
YDR312W	-	96	33.857	ENSLBEG00000020897	ppan	86	34.204	Labrus_bergylta
YDR312W	-	98	33.853	ENSLACG00000001451	ppan	76	34.845	Latimeria_chalumnae
YDR312W	-	99	33.479	ENSLOCG00000007381	ppan	63	35.369	Lepisosteus_oculatus
YDR312W	-	86	33.504	ENSLAFG00000016399	-	68	34.109	Loxodonta_africana
YDR312W	-	90	34.615	ENSMFAG00000042854	-	73	34.360	Macaca_fascicularis
YDR312W	-	90	34.856	ENSMMUG00000017211	PPAN	86	47.674	Macaca_mulatta
YDR312W	-	90	34.615	ENSMNEG00000031363	-	73	34.360	Macaca_nemestrina
YDR312W	-	90	34.615	ENSMLEG00000042991	-	73	34.360	Mandrillus_leucophaeus
YDR312W	-	99	34.205	ENSMAMG00000012418	ppan	65	34.889	Mastacembelus_armatus
YDR312W	-	99	34.341	ENSMZEG00005018872	ppan	92	34.259	Maylandia_zebra
YDR312W	-	99	34.120	ENSMAUG00000000310	Ppan	73	35.990	Mesocricetus_auratus
YDR312W	-	99	34.773	ENSMICG00000047321	-	85	34.773	Microcebus_murinus
YDR312W	-	99	34.125	ENSMOCG00000016402	Ppan	78	35.129	Microtus_ochrogaster
YDR312W	-	99	33.333	ENSMMOG00000011584	ppan	70	34.123	Mola_mola
YDR312W	-	95	34.014	ENSMODG00000005158	PPAN	84	32.829	Monodelphis_domestica
YDR312W	-	99	33.553	ENSMALG00000015931	ppan	61	34.021	Monopterus_albus
YDR312W	-	99	34.557	MGP_CAROLIEiJ_G0031850	Ppan	85	33.693	Mus_caroli
YDR312W	-	99	34.341	ENSMUSG00000004100	Ppan	85	38.462	Mus_musculus
YDR312W	-	99	34.773	MGP_PahariEiJ_G0014716	Ppan	85	33.693	Mus_pahari
YDR312W	-	99	34.341	MGP_SPRETEiJ_G0032974	Ppan	85	33.477	Mus_spretus
YDR312W	-	99	32.829	ENSMPUG00000006866	-	85	33.261	Mustela_putorius_furo
YDR312W	-	99	33.691	ENSMLUG00000014186	-	78	34.426	Myotis_lucifugus
YDR312W	-	77	33.520	ENSNGAG00000012813	Ppan	66	34.194	Nannospalax_galili
YDR312W	-	99	33.917	ENSNBRG00000008460	ppan	69	34.679	Neolamprologus_brichardi
YDR312W	-	90	34.856	ENSNLEG00000012048	-	73	34.597	Nomascus_leucogenys
YDR312W	-	92	32.775	ENSMEUG00000007968	-	77	33.086	Notamacropus_eugenii
YDR312W	-	98	33.703	ENSODEG00000016743	-	72	35.266	Octodon_degus
YDR312W	-	99	34.136	ENSONIG00000001598	ppan	69	34.917	Oreochromis_niloticus
YDR312W	-	98	33.917	ENSOANG00000006740	PPAN	73	34.762	Ornithorhynchus_anatinus
YDR312W	-	99	33.333	ENSORLG00000005634	ppan	68	34.217	Oryzias_latipes
YDR312W	-	99	33.407	ENSORLG00020003966	ppan	68	34.217	Oryzias_latipes_hni
YDR312W	-	99	33.553	ENSORLG00015016869	ppan	82	36.723	Oryzias_latipes_hsok
YDR312W	-	99	34.430	ENSOMEG00000023943	ppan	76	33.626	Oryzias_melastigma
YDR312W	-	89	34.146	ENSOGAG00000014454	-	74	34.118	Otolemur_garnettii
YDR312W	-	88	33.252	ENSOARG00000014981	-	67	34.316	Ovis_aries
YDR312W	-	90	34.856	ENSPPAG00000039744	-	73	34.597	Pan_paniscus
YDR312W	-	98	33.406	ENSPPRG00000023895	-	78	34.670	Panthera_pardus
YDR312W	-	88	33.744	ENSPTIG00000015960	-	76	35.215	Panthera_tigris_altaica
YDR312W	-	90	34.856	ENSPTRG00000010459	PPAN	73	34.597	Pan_troglodytes
YDR312W	-	90	34.615	ENSPANG00000005948	-	73	34.360	Papio_anubis
YDR312W	-	99	33.553	ENSPMGG00000001212	ppan	64	34.190	Periophthalmus_magnuspinnatus
YDR312W	-	99	34.341	ENSPEMG00000015393	Ppan	85	34.125	Peromyscus_maniculatus_bairdii
YDR312W	-	95	34.240	ENSPCIG00000018786	-	74	33.333	Phascolarctos_cinereus
YDR312W	-	99	35.512	ENSPFOG00000005396	ppan	67	36.342	Poecilia_formosa
YDR312W	-	99	35.076	ENSPLAG00000021445	ppan	67	35.867	Poecilia_latipinna
YDR312W	-	99	35.512	ENSPMEG00000011625	ppan	67	36.342	Poecilia_mexicana
YDR312W	-	99	35.011	ENSPREG00000006330	ppan	67	36.105	Poecilia_reticulata
YDR312W	-	86	32.653	ENSPCAG00000007303	-	84	31.841	Procavia_capensis
YDR312W	-	94	35.731	ENSPCOG00000027096	-	78	35.831	Propithecus_coquereli
YDR312W	-	99	32.609	ENSPVAG00000003673	-	77	33.724	Pteropus_vampyrus
YDR312W	-	99	34.557	ENSPNYG00000013872	ppan	71	34.332	Pundamilia_nyererei
YDR312W	-	90	36.520	ENSPNAG00000017058	ppan	64	36.275	Pygocentrus_nattereri
YDR312W	-	99	33.906	ENSRNOG00000020608	Ppan	85	34.335	Rattus_norvegicus
YDR312W	-	92	34.123	ENSRBIG00000041320	-	74	34.118	Rhinopithecus_bieti
YDR312W	-	92	34.123	ENSRROG00000038245	-	92	34.118	Rhinopithecus_roxellana
YDR312W	-	92	34.123	ENSRROG00000034660	-	74	34.118	Rhinopithecus_roxellana
YDR312W	-	89	35.627	ENSSBOG00000026246	-	75	35.545	Saimiri_boliviensis_boliviensis
YDR312W	-	87	34.406	ENSSHAG00000009305	-	84	33.911	Sarcophilus_harrisii
YDR312W	-	99	36.026	ENSSFOG00015023726	ppan	69	36.386	Scleropages_formosus
YDR312W	-	94	34.633	ENSSMAG00000004098	ppan	63	35.176	Scophthalmus_maximus
YDR312W	-	99	34.868	ENSSDUG00000021301	ppan	67	35.167	Seriola_dumerili
YDR312W	-	99	34.868	ENSSLDG00000016106	ppan	67	35.167	Seriola_lalandi_dorsalis
YDR312W	-	99	34.061	ENSSPAG00000000160	ppan	67	34.606	Stegastes_partitus
YDR312W	-	99	33.261	ENSSSCG00000013662	PPAN	83	39.823	Sus_scrofa
YDR312W	-	99	34.725	ENSTRUG00000007656	ppan	70	35.646	Takifugu_rubripes
YDR312W	-	92	35.000	ENSTNIG00000018564	ppan	77	35.000	Tetraodon_nigroviridis
YDR312W	-	57	36.742	ENSTBEG00000002721	-	50	36.742	Tupaia_belangeri
YDR312W	-	99	31.590	ENSTTRG00000004530	-	78	31.840	Tursiops_truncatus
YDR312W	-	93	34.192	ENSVVUG00000028309	-	85	33.477	Vulpes_vulpes
YDR312W	-	96	36.036	ENSXETG00000022055	ppan	62	37.000	Xenopus_tropicalis
YDR312W	-	99	35.242	ENSXMAG00000028708	ppan	67	36.124	Xiphophorus_maculatus