EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YDR365C (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Nucleolar protein involved in pre-rRNA processing%3B depletion causes severely decreased 18S rRNA levels
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 1887 bases
Position: chrIV:1204497-1206383
Accession: S000002773
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YDR365C_mRNA	NUC153	PF08159.12	1.5e-15	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YDR365C_mRNA	-	1887	-	YDR365C_mRNA	628 (aa)	-	Q06344

Gene Model

Click here to download YDR365C's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YDR365C's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YDR365C	-	73	35.294	ENSG00000089048	ESF1	68	37.318	Homo_sapiens
YDR365C	-	68	31.535	ENSAPOG00000003004	esf1	88	31.377	Acanthochromis_polyacanthus
YDR365C	-	73	34.241	ENSAMEG00000008830	ESF1	55	33.868	Ailuropoda_melanoleuca
YDR365C	-	68	32.842	ENSAOCG00000006033	esf1	91	33.470	Amphiprion_ocellaris
YDR365C	-	73	34.570	ENSANAG00000036778	ESF1	55	33.992	Aotus_nancymaae
YDR365C	-	73	34.113	ENSBTAG00000007130	ESF1	54	33.602	Bos_taurus
YDR365C	-	73	33.922	ENSCJAG00000004640	ESF1	55	33.661	Callithrix_jacchus
YDR365C	-	73	34.436	ENSCAFG00000005587	ESF1	55	34.469	Canis_familiaris
YDR365C	-	73	34.436	ENSCAFG00020027530	ESF1	55	34.469	Canis_lupus_dingo
YDR365C	-	73	33.528	ENSCHIG00000021188	ESF1	56	32.794	Capra_hircus
YDR365C	-	73	34.902	ENSTSYG00000009956	ESF1	55	34.004	Carlito_syrichta
YDR365C	-	65	32.333	ENSCAPG00000010466	-	54	31.765	Cavia_aperea
YDR365C	-	73	33.072	ENSCPOG00000014027	-	56	34.653	Cavia_porcellus
YDR365C	-	73	34.706	ENSCCAG00000024521	ESF1	55	33.992	Cebus_capucinus
YDR365C	-	73	35.029	ENSCATG00000042792	ESF1	55	33.794	Cercocebus_atys
YDR365C	-	73	34.503	ENSCLAG00000013266	-	56	34.122	Chinchilla_lanigera
YDR365C	-	73	35.029	ENSCSAG00000011777	ESF1	55	33.794	Chlorocebus_sabaeus
YDR365C	-	60	33.021	ENSCING00000020446	-	71	34.711	Ciona_intestinalis
YDR365C	-	71	35.421	ENSCSAVG00000009015	-	63	33.755	Ciona_savignyi
YDR365C	-	73	34.834	ENSCANG00000030674	ESF1	55	33.597	Colobus_angolensis_palliatus
YDR365C	-	73	34.185	ENSCGRG00001018257	Esf1	56	33.202	Cricetulus_griseus_chok1gshd
YDR365C	-	52	41.631	ENSCSEG00000001159	esf1	63	31.157	Cynoglossus_semilaevis
YDR365C	-	73	33.922	ENSDNOG00000019409	ESF1	55	33.858	Dasypus_novemcinctus
YDR365C	-	73	34.646	ENSDORG00000016313	Esf1	56	34.600	Dipodomys_ordii
YDR365C	-	78	36.432	FBgn0024364	CG11417	67	31.216	Drosophila_melanogaster
YDR365C	-	74	32.638	ENSEBUG00000015161	esf1	71	33.199	Eptatretus_burgeri
YDR365C	-	73	34.180	ENSEASG00005001777	ESF1	55	33.728	Equus_asinus_asinus
YDR365C	-	73	34.180	ENSECAG00000019188	ESF1	55	33.728	Equus_caballus
YDR365C	-	73	35.019	ENSFCAG00000000919	ESF1	55	34.055	Felis_catus
YDR365C	-	73	33.333	ENSFALG00000010914	ESF1	55	33.532	Ficedula_albicollis
YDR365C	-	76	31.657	ENSFHEG00000014984	esf1	93	33.267	Fundulus_heteroclitus
YDR365C	-	73	34.387	ENSGALG00000034768	ESF1	55	32.857	Gallus_gallus
YDR365C	-	73	35.294	ENSGGOG00000006692	ESF1	55	35.516	Gorilla_gorilla
YDR365C	-	73	34.375	ENSHGLG00000011505	ESF1	56	34.783	Heterocephalus_glaber_female
YDR365C	-	73	34.375	ENSHGLG00100015045	ESF1	56	34.783	Heterocephalus_glaber_male
YDR365C	-	72	34.714	ENSSTOG00000009846	ESF1	55	33.728	Ictidomys_tridecemlineatus
YDR365C	-	74	33.528	ENSJJAG00000012570	Esf1	55	32.604	Jaculus_jaculus
YDR365C	-	73	34.971	ENSLAFG00000005479	ESF1	59	34.104	Loxodonta_africana
YDR365C	-	73	35.029	ENSMFAG00000036841	ESF1	55	33.794	Macaca_fascicularis
YDR365C	-	73	35.225	ENSMNEG00000044042	ESF1	55	33.794	Macaca_nemestrina
YDR365C	-	73	35.029	ENSMLEG00000037121	ESF1	55	33.794	Mandrillus_leucophaeus
YDR365C	-	73	34.387	ENSMGAG00000004291	ESF1	55	33.061	Meleagris_gallopavo
YDR365C	-	73	34.517	ENSMAUG00000015975	Esf1	55	34.531	Mesocricetus_auratus
YDR365C	-	73	34.442	ENSMICG00000010711	ESF1	55	33.663	Microcebus_murinus
YDR365C	-	73	34.257	ENSMOCG00000005902	Esf1	56	33.598	Microtus_ochrogaster
YDR365C	-	73	33.463	ENSMODG00000005066	ESF1	57	34.190	Monodelphis_domestica
YDR365C	-	70	34.783	ENSMALG00000007338	esf1	61	33.122	Monopterus_albus
YDR365C	-	73	33.333	MGP_CAROLIEiJ_G0024365	Esf1	55	32.998	Mus_caroli
YDR365C	-	73	33.528	ENSMUSG00000045624	Esf1	55	33.400	Mus_musculus
YDR365C	-	73	33.723	MGP_PahariEiJ_G0025810	Esf1	55	33.400	Mus_pahari
YDR365C	-	73	33.333	MGP_SPRETEiJ_G0025285	Esf1	55	33.200	Mus_spretus
YDR365C	-	73	34.308	ENSMPUG00000001450	ESF1	55	33.465	Mustela_putorius_furo
YDR365C	-	73	34.241	ENSMLUG00000013080	ESF1	55	33.858	Myotis_lucifugus
YDR365C	-	73	36.345	ENSNLEG00000014563	ESF1	54	35.772	Nomascus_leucogenys
YDR365C	-	54	41.964	ENSOPRG00000004862	ESF1	67	38.488	Ochotona_princeps
YDR365C	-	73	33.988	ENSODEG00000006824	ESF1	57	34.320	Octodon_degus
YDR365C	-	73	31.898	ENSOCUG00000005414	ESF1	56	31.055	Oryctolagus_cuniculus
YDR365C	-	70	32.777	ENSORLG00000018625	esf1	55	37.097	Oryzias_latipes
YDR365C	-	72	32.094	ENSORLG00015022826	esf1	89	30.205	Oryzias_latipes_hsok
YDR365C	-	68	31.092	ENSOMEG00000009311	esf1	88	32.317	Oryzias_melastigma
YDR365C	-	71	33.065	ENSOGAG00000016912	ESF1	56	32.394	Otolemur_garnettii
YDR365C	-	73	33.528	ENSOARG00000011158	ESF1	53	32.797	Ovis_aries
YDR365C	-	73	34.902	ENSPPAG00000024379	ESF1	55	35.317	Pan_paniscus
YDR365C	-	73	35.019	ENSPPRG00000012007	ESF1	55	34.834	Panthera_pardus
YDR365C	-	73	35.019	ENSPTIG00000020063	ESF1	55	34.834	Panthera_tigris_altaica
YDR365C	-	73	35.098	ENSPTRG00000013258	ESF1	54	35.317	Pan_troglodytes
YDR365C	-	52	33.333	ENSPMGG00000016911	esf1	61	31.151	Periophthalmus_magnuspinnatus
YDR365C	-	73	32.375	ENSPCIG00000019331	ESF1	57	34.524	Phascolarctos_cinereus
YDR365C	-	73	35.167	ENSPPYG00000010715	ESF1	54	34.257	Pongo_abelii
YDR365C	-	57	40.167	ENSPCAG00000006881	ESF1	55	32.871	Procavia_capensis
YDR365C	-	73	33.789	ENSRNOG00000004777	Esf1	55	33.202	Rattus_norvegicus
YDR365C	-	73	34.834	ENSRBIG00000035763	ESF1	55	34.122	Rhinopithecus_bieti
YDR365C	-	73	35.029	ENSRROG00000032022	ESF1	55	33.794	Rhinopithecus_roxellana
YDR365C	-	73	34.578	ENSSBOG00000030387	ESF1	55	33.792	Saimiri_boliviensis_boliviensis
YDR365C	-	73	33.205	ENSSHAG00000000449	ESF1	59	33.789	Sarcophilus_harrisii
YDR365C	-	57	30.637	ENSSDUG00000019460	esf1	67	32.480	Seriola_dumerili
YDR365C	-	74	31.923	ENSSPUG00000012635	ESF1	59	31.712	Sphenodon_punctatus
YDR365C	-	73	33.918	ENSSSCG00000007077	ESF1	54	33.465	Sus_scrofa
YDR365C	-	78	32.605	ENSTGUG00000002450	ESF1	55	32.806	Taeniopygia_guttata
YDR365C	-	72	32.742	ENSTRUG00000009445	esf1	64	31.148	Takifugu_rubripes
YDR365C	-	73	32.943	ENSTTRG00000005335	ESF1	55	32.665	Tursiops_truncatus
YDR365C	-	73	33.592	ENSUMAG00000008579	ESF1	55	33.868	Ursus_maritimus
YDR365C	-	73	34.436	ENSVVUG00000014318	ESF1	51	34.469	Vulpes_vulpes
YDR365C	-	72	33.792	ENSXETG00000008079	esf1	58	33.004	Xenopus_tropicalis