EuRBPDB

Description

Ensembl ID: YDR394W (Gene tree)
Gene ID: -
Gene Symbol: RPT3
Alias: YNT1|YTA2
Full Name: ATPase of the 19S regulatory particle of the 26S proteasome%3B one of ATPases of the regulatory particle%3B involved in the degradation of ubiquitinated substrates%3B substrate of N-acetyltransferase B
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 1287
Position: chrIV: 1261681-1262967
Accession: S000002802
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YDR394W_mRNA	-	1287	-	YDR394W_mRNA	428 (aa)	-	P33298

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YDR394W	RPT3	90	70.543	WBGene00004503	rpt-3	93	70.543	Caenorhabditis_elegans
YDR394W	RPT3	85	48.493	WBGene00004502	rpt-2	82	49.315	Caenorhabditis_elegans
YDR394W	RPT3	70	47.157	WBGene00004501	rpt-1	69	47.157	Caenorhabditis_elegans
YDR394W	RPT3	87	49.330	ENSG00000100764	PSMC1	98	60.976	Homo_sapiens
YDR394W	RPT3	85	38.961	ENSG00000165916	PSMC3	93	37.942	Homo_sapiens
YDR394W	RPT3	76	46.154	ENSG00000087191	PSMC5	88	48.413	Homo_sapiens
YDR394W	RPT3	84	39.833	ENSG00000100519	PSMC6	96	46.875	Homo_sapiens
YDR394W	RPT3	66	48.944	ENSG00000161057	PSMC2	71	48.944	Homo_sapiens
YDR394W	RPT3	85	47.527	YDL007W	RPT2	86	48.138	Saccharomyces_cerevisiae
YDR394W	RPT3	88	41.902	YGL048C	RPT6	94	41.902	Saccharomyces_cerevisiae
YDR394W	RPT3	65	49.821	YKL145W	RPT1	59	49.821	Saccharomyces_cerevisiae