EuRBPDB

Description

Ensembl ID: YDR432W (Gene tree)
Gene ID: -
Gene Symbol: NPL3
Alias: MTR13|MTS1|NAB1|NOP3
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 1245
Position: chrIV:1328783-1330027
Accession: S000002840
RBP type: canonical RBP
Summary: RNA-binding protein%3B promotes elongation%2C regulates termination%2C and carries poly(A) mRNA from nucleus to cytoplasm%3B represses translation initiation by binding eIF4G%3B required for pre-mRNA splicing%3B interacts with E3 ubiquitin ligase Bre1p%2C linking histone ubiquitination to mRNA processing%3B may have role in telomere maintenance%3B dissociation from mRNAs promoted by Mtr10p%3B phosphorylated by Sky1p in cytoplasm%3B protein abundance increases in response to DNA replication stress

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YDR432W_mRNA	RRM_1	PF00076.22	2.3e-29	1	2
YDR432W_mRNA	RRM_1	PF00076.22	2.3e-29	2	2

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
25173706	Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins	RNPxl & yeast	2014 Aug 31	Kramer K	DOI: 10.1038/nmeth.3092
25173706	Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins	RNPxl.PAR_CL & yeast	2014 Aug 31	Kramer K	DOI: 10.1038/nmeth.3092
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128
23222640	Global analysis of yeast mRNPs	IC & yeast	2012 Dec 9	Mitchell SF	DOI: 10.1038/nsmb.2468
21124907	A screen for RNA binding proteins in yeast indicates dual functions for many enzymes	ProtoArray & yeast	2010 Nov 11	DOI: 10.1371/journal.pone.0015499

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YDR432W_mRNA	-	1245	-	YDR432W_mRNA	414 (aa)	-	Q01560

Gene Model

Protein-Protein Interaction (PPI)