EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YER007C-A (Gene tree)
Gene ID: -
Gene Symbol: TMA20
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 649
Position: chrV:166237-166885
Accession: S000002957
RBP type: canonical RBP
Summary: Protein of unknown function that associates with ribosomes%3B has a putative RNA binding domain%3B interacts with Tma22p%3B null mutant exhibits translation defects%3B has homology to human oncogene MCT-1%3B protein abundance increases in response to DNA replication stress

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YER007C-A_mRNA	PUA	PF01472.20	2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YER007C-A_mRNA	-	546	-	YER007C-A_mRNA	181 (aa)	-	P89886

Gene Model

Click here to download YER007C-A's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YER007C-A's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YER007C-A	TMA20	98	47.778	ENSG00000232119	MCTS1	98	47.778	Homo_sapiens
YER007C-A	TMA20	98	47.222	ENSG00000101898	MCTS2P	98	47.222	Homo_sapiens
YER007C-A	TMA20	98	46.667	ENSAPOG00000012469	mcts1	98	46.667	Acanthochromis_polyacanthus
YER007C-A	TMA20	98	47.222	ENSAMEG00000019372	-	98	47.222	Ailuropoda_melanoleuca
YER007C-A	TMA20	95	46.243	ENSACIG00000013270	mcts1	90	46.243	Amphilophus_citrinellus
YER007C-A	TMA20	98	46.667	ENSAOCG00000000691	mcts1	98	46.667	Amphiprion_ocellaris
YER007C-A	TMA20	98	46.667	ENSAPEG00000005866	mcts1	98	46.667	Amphiprion_percula
YER007C-A	TMA20	98	47.486	ENSATEG00000018544	mcts1	97	47.486	Anabas_testudineus
YER007C-A	TMA20	95	45.665	ENSAPLG00000009809	-	96	45.665	Anas_platyrhynchos
YER007C-A	TMA20	98	47.222	ENSACAG00000010791	-	98	47.222	Anolis_carolinensis
YER007C-A	TMA20	95	35.795	ENSANAG00000024745	-	96	35.795	Aotus_nancymaae
YER007C-A	TMA20	98	47.778	ENSANAG00000033714	-	98	47.778	Aotus_nancymaae
YER007C-A	TMA20	98	47.222	ENSACLG00000001364	mcts1	98	47.222	Astatotilapia_calliptera
YER007C-A	TMA20	88	42.331	ENSAMXG00000039064	-	88	42.331	Astyanax_mexicanus
YER007C-A	TMA20	98	46.667	ENSAMXG00000034833	mcts1	98	46.667	Astyanax_mexicanus
YER007C-A	TMA20	98	47.778	ENSBTAG00000034992	MCTS1	98	47.778	Bos_taurus
YER007C-A	TMA20	99	46.154	WBGene00015703	C11D2.7	97	46.154	Caenorhabditis_elegans
YER007C-A	TMA20	98	47.778	ENSCJAG00000002593	MCTS1	98	47.778	Callithrix_jacchus
YER007C-A	TMA20	95	45.665	ENSCJAG00000032451	MCTS2P	93	45.665	Callithrix_jacchus
YER007C-A	TMA20	98	47.222	ENSCAFG00000005346	-	98	47.222	Canis_familiaris
YER007C-A	TMA20	98	47.778	ENSCAFG00000018545	MCTS1	98	47.778	Canis_familiaris
YER007C-A	TMA20	98	47.222	ENSCAFG00020004450	-	98	47.222	Canis_lupus_dingo
YER007C-A	TMA20	98	47.778	ENSCAFG00020003887	-	98	47.778	Canis_lupus_dingo
YER007C-A	TMA20	98	47.778	ENSCHIG00000016396	-	98	47.778	Capra_hircus
YER007C-A	TMA20	95	46.243	ENSCHIG00000021551	-	93	46.243	Capra_hircus
YER007C-A	TMA20	98	47.778	ENSTSYG00000001440	MCTS1	98	47.778	Carlito_syrichta
YER007C-A	TMA20	95	47.977	ENSTSYG00000036289	MCTS2P	93	47.977	Carlito_syrichta
YER007C-A	TMA20	98	47.778	ENSCPOG00000005502	MCTS1	98	47.778	Cavia_porcellus
YER007C-A	TMA20	98	47.778	ENSCCAG00000024478	-	98	47.778	Cebus_capucinus
YER007C-A	TMA20	97	31.522	ENSCCAG00000035857	-	95	31.522	Cebus_capucinus
YER007C-A	TMA20	95	46.243	ENSCCAG00000024986	-	95	46.243	Cebus_capucinus
YER007C-A	TMA20	98	47.778	ENSCATG00000045065	MCTS1	98	47.778	Cercocebus_atys
YER007C-A	TMA20	98	47.778	ENSCLAG00000000154	MCTS1	98	47.778	Chinchilla_lanigera
YER007C-A	TMA20	98	47.778	ENSCSAG00000018337	MCTS1	98	47.778	Chlorocebus_sabaeus
YER007C-A	TMA20	98	47.222	ENSCPBG00000012825	-	62	47.222	Chrysemys_picta_bellii
YER007C-A	TMA20	99	47.802	ENSCING00000011506	-	99	47.802	Ciona_intestinalis
YER007C-A	TMA20	99	47.253	ENSCSAVG00000005603	-	99	47.253	Ciona_savignyi
YER007C-A	TMA20	98	47.778	ENSCANG00000043353	MCTS1	98	47.778	Colobus_angolensis_palliatus
YER007C-A	TMA20	98	47.778	ENSCGRG00001022838	Mcts1	98	47.778	Cricetulus_griseus_chok1gshd
YER007C-A	TMA20	95	46.821	ENSCGRG00000007931	Mcts1	93	46.821	Cricetulus_griseus_crigri
YER007C-A	TMA20	98	46.667	ENSCSEG00000002120	mcts1	98	46.667	Cynoglossus_semilaevis
YER007C-A	TMA20	98	46.667	ENSCVAG00000005236	mcts1	98	46.667	Cyprinodon_variegatus
YER007C-A	TMA20	98	46.667	ENSDARG00000025972	mcts1	98	46.667	Danio_rerio
YER007C-A	TMA20	99	47.514	ENSDNOG00000046770	-	98	47.514	Dasypus_novemcinctus
YER007C-A	TMA20	98	47.778	ENSDORG00000027394	Mcts1	98	47.778	Dipodomys_ordii
YER007C-A	TMA20	97	49.721	FBgn0029833	MCTS1	97	49.721	Drosophila_melanogaster
YER007C-A	TMA20	95	45.087	ENSETEG00000015462	-	93	45.087	Echinops_telfairi
YER007C-A	TMA20	95	45.665	ENSETEG00000012151	-	96	45.665	Echinops_telfairi
YER007C-A	TMA20	98	45.556	ENSEBUG00000012532	mcts1	86	45.556	Eptatretus_burgeri
YER007C-A	TMA20	98	47.222	ENSEASG00005019107	-	98	47.222	Equus_asinus_asinus
YER007C-A	TMA20	98	48.333	ENSEASG00005023018	-	98	48.333	Equus_asinus_asinus
YER007C-A	TMA20	98	48.333	ENSECAG00000014597	MCTS1	98	48.333	Equus_caballus
YER007C-A	TMA20	98	47.222	ENSECAG00000020565	-	98	47.222	Equus_caballus
YER007C-A	TMA20	95	46.243	ENSEEUG00000007258	-	93	46.243	Erinaceus_europaeus
YER007C-A	TMA20	98	46.111	ENSELUG00000020077	mcts1	98	46.111	Esox_lucius
YER007C-A	TMA20	98	47.222	ENSFCAG00000038539	-	98	47.222	Felis_catus
YER007C-A	TMA20	95	46.243	ENSFCAG00000029331	-	93	46.243	Felis_catus
YER007C-A	TMA20	95	45.665	ENSFALG00000001531	-	96	45.665	Ficedula_albicollis
YER007C-A	TMA20	98	47.778	ENSFDAG00000009644	MCTS1	98	47.778	Fukomys_damarensis
YER007C-A	TMA20	98	46.111	ENSFHEG00000017670	mcts1	98	46.111	Fundulus_heteroclitus
YER007C-A	TMA20	98	46.667	ENSGMOG00000005450	mcts1	98	46.667	Gadus_morhua
YER007C-A	TMA20	98	46.111	ENSGALG00000008517	MCTS1	98	46.111	Gallus_gallus
YER007C-A	TMA20	98	46.111	ENSGAFG00000000561	mcts1	98	46.111	Gambusia_affinis
YER007C-A	TMA20	98	47.222	ENSGAGG00000009284	-	98	47.222	Gopherus_agassizii
YER007C-A	TMA20	98	47.778	ENSGGOG00000009420	MCTS1	98	47.778	Gorilla_gorilla
YER007C-A	TMA20	98	47.222	ENSHBUG00000017135	mcts1	98	47.222	Haplochromis_burtoni
YER007C-A	TMA20	98	47.222	ENSHGLG00000000956	MCTS1	98	47.222	Heterocephalus_glaber_female
YER007C-A	TMA20	98	47.222	ENSHGLG00100011793	MCTS1	98	47.222	Heterocephalus_glaber_male
YER007C-A	TMA20	89	46.296	ENSHGLG00100009458	MCTS2P	89	46.296	Heterocephalus_glaber_male
YER007C-A	TMA20	98	46.111	ENSHCOG00000015082	mcts1	98	46.111	Hippocampus_comes
YER007C-A	TMA20	98	46.667	ENSIPUG00000019053	mcts1	98	46.667	Ictalurus_punctatus
YER007C-A	TMA20	92	44.578	ENSSTOG00000033476	-	96	44.578	Ictidomys_tridecemlineatus
YER007C-A	TMA20	98	47.778	ENSSTOG00000011496	-	98	47.778	Ictidomys_tridecemlineatus
YER007C-A	TMA20	98	37.989	ENSSTOG00000019938	-	88	37.989	Ictidomys_tridecemlineatus
YER007C-A	TMA20	95	45.665	ENSSTOG00000028611	MCTS2P	93	45.665	Ictidomys_tridecemlineatus
YER007C-A	TMA20	95	42.775	ENSJJAG00000014683	-	93	42.775	Jaculus_jaculus
YER007C-A	TMA20	98	47.778	ENSJJAG00000000514	Mcts1	98	47.778	Jaculus_jaculus
YER007C-A	TMA20	98	46.667	ENSKMAG00000000443	mcts1	98	46.667	Kryptolebias_marmoratus
YER007C-A	TMA20	98	46.667	ENSLBEG00000028699	mcts1	98	46.667	Labrus_bergylta
YER007C-A	TMA20	98	46.111	ENSLOCG00000015255	mcts1	98	46.111	Lepisosteus_oculatus
YER007C-A	TMA20	98	48.333	ENSLAFG00000015272	-	98	48.333	Loxodonta_africana
YER007C-A	TMA20	98	47.778	ENSMFAG00000032574	MCTS1	98	47.778	Macaca_fascicularis
YER007C-A	TMA20	98	47.778	ENSMMUG00000009043	MCTS1	98	47.778	Macaca_mulatta
YER007C-A	TMA20	98	47.778	ENSMNEG00000041580	MCTS1	98	47.778	Macaca_nemestrina
YER007C-A	TMA20	98	47.778	ENSMLEG00000040575	MCTS1	98	47.778	Mandrillus_leucophaeus
YER007C-A	TMA20	98	47.222	ENSMAMG00000020164	mcts1	98	47.222	Mastacembelus_armatus
YER007C-A	TMA20	98	47.222	ENSMZEG00005007740	mcts1	98	47.222	Maylandia_zebra
YER007C-A	TMA20	95	45.087	ENSMGAG00000007561	-	94	45.087	Meleagris_gallopavo
YER007C-A	TMA20	98	47.222	ENSMAUG00000000385	Mcts1	98	47.222	Mesocricetus_auratus
YER007C-A	TMA20	98	43.575	ENSMICG00000035625	-	98	43.575	Microcebus_murinus
YER007C-A	TMA20	94	40.116	ENSMICG00000045427	-	100	40.116	Microcebus_murinus
YER007C-A	TMA20	98	47.222	ENSMICG00000014551	-	98	47.222	Microcebus_murinus
YER007C-A	TMA20	98	47.778	ENSMOCG00000018373	Mcts1	98	47.778	Microtus_ochrogaster
YER007C-A	TMA20	89	46.296	ENSMMOG00000004204	mcts1	98	46.296	Mola_mola
YER007C-A	TMA20	98	46.111	ENSMODG00000025135	-	98	46.111	Monodelphis_domestica
YER007C-A	TMA20	98	47.778	ENSMODG00000010354	-	98	47.778	Monodelphis_domestica
YER007C-A	TMA20	98	46.667	ENSMALG00000008278	mcts1	98	46.667	Monopterus_albus
YER007C-A	TMA20	98	47.778	MGP_CAROLIEiJ_G0033019	Mcts1	98	47.778	Mus_caroli
YER007C-A	TMA20	98	45.556	MGP_CAROLIEiJ_G0024470	Mcts2	98	45.556	Mus_caroli
YER007C-A	TMA20	98	47.778	ENSMUSG00000000355	Mcts1	98	47.778	Mus_musculus
YER007C-A	TMA20	98	45.556	ENSMUSG00000042814	Mcts2	98	45.556	Mus_musculus
YER007C-A	TMA20	98	45.556	MGP_PahariEiJ_G0025913	Mcts2	98	45.556	Mus_pahari
YER007C-A	TMA20	98	47.778	MGP_PahariEiJ_G0031565	Mcts1	98	47.778	Mus_pahari
YER007C-A	TMA20	98	47.778	MGP_SPRETEiJ_G0034177	Mcts1	98	47.778	Mus_spretus
YER007C-A	TMA20	98	30.000	MGP_SPRETEiJ_G0025391	-	97	30.000	Mus_spretus
YER007C-A	TMA20	98	46.667	ENSMPUG00000019567	-	98	46.667	Mustela_putorius_furo
YER007C-A	TMA20	98	47.222	ENSMPUG00000001407	-	98	47.222	Mustela_putorius_furo
YER007C-A	TMA20	98	46.369	ENSMLUG00000015101	-	97	46.369	Myotis_lucifugus
YER007C-A	TMA20	98	47.222	ENSMLUG00000024089	-	98	47.222	Myotis_lucifugus
YER007C-A	TMA20	98	47.778	ENSNGAG00000010362	Mcts1	98	47.778	Nannospalax_galili
YER007C-A	TMA20	56	53.465	ENSNBRG00000002861	mcts1	83	53.465	Neolamprologus_brichardi
YER007C-A	TMA20	98	47.778	ENSNLEG00000015021	MCTS1	98	47.778	Nomascus_leucogenys
YER007C-A	TMA20	95	41.040	ENSMEUG00000014328	-	96	41.040	Notamacropus_eugenii
YER007C-A	TMA20	51	57.609	ENSOPRG00000009991	-	96	57.609	Ochotona_princeps
YER007C-A	TMA20	98	46.369	ENSODEG00000001941	-	97	46.369	Octodon_degus
YER007C-A	TMA20	98	41.667	ENSODEG00000011493	MCTS2P	99	41.667	Octodon_degus
YER007C-A	TMA20	95	46.821	ENSODEG00000000920	-	93	46.821	Octodon_degus
YER007C-A	TMA20	98	47.222	ENSONIG00000002566	mcts1	98	47.222	Oreochromis_niloticus
YER007C-A	TMA20	98	45.251	ENSOANG00000002577	-	97	45.251	Ornithorhynchus_anatinus
YER007C-A	TMA20	98	46.667	ENSOCUG00000013711	-	98	46.667	Oryctolagus_cuniculus
YER007C-A	TMA20	98	46.369	ENSOCUG00000014315	-	97	46.369	Oryctolagus_cuniculus
YER007C-A	TMA20	98	46.667	ENSORLG00000030590	mcts1	98	46.667	Oryzias_latipes
YER007C-A	TMA20	98	46.667	ENSORLG00020003467	mcts1	98	46.667	Oryzias_latipes_hni
YER007C-A	TMA20	98	46.667	ENSORLG00015012756	mcts1	98	46.667	Oryzias_latipes_hsok
YER007C-A	TMA20	98	46.667	ENSOMEG00000000379	mcts1	98	46.667	Oryzias_melastigma
YER007C-A	TMA20	98	47.222	ENSOARG00000004635	-	97	47.222	Ovis_aries
YER007C-A	TMA20	95	46.243	ENSOARG00000013384	-	93	46.243	Ovis_aries
YER007C-A	TMA20	98	47.778	ENSPPAG00000040584	MCTS1	98	47.778	Pan_paniscus
YER007C-A	TMA20	98	47.222	ENSPPRG00000023309	-	98	47.222	Panthera_pardus
YER007C-A	TMA20	83	34.000	ENSPPRG00000011672	-	91	34.000	Panthera_pardus
YER007C-A	TMA20	95	46.243	ENSPPRG00000002628	-	93	46.243	Panthera_pardus
YER007C-A	TMA20	98	47.222	ENSPTIG00000011124	-	98	47.222	Panthera_tigris_altaica
YER007C-A	TMA20	95	46.243	ENSPTIG00000010906	-	93	46.243	Panthera_tigris_altaica
YER007C-A	TMA20	95	46.243	ENSPTRG00000047770	-	93	46.243	Pan_troglodytes
YER007C-A	TMA20	98	47.778	ENSPTRG00000022241	MCTS1	98	47.778	Pan_troglodytes
YER007C-A	TMA20	95	46.243	ENSPTRG00000047072	-	93	46.243	Pan_troglodytes
YER007C-A	TMA20	98	47.778	ENSPANG00000011471	MCTS1	98	47.778	Papio_anubis
YER007C-A	TMA20	98	47.222	ENSPKIG00000021497	mcts1	98	47.222	Paramormyrops_kingsleyae
YER007C-A	TMA20	75	51.095	ENSPSIG00000016796	-	97	51.095	Pelodiscus_sinensis
YER007C-A	TMA20	97	45.763	ENSPMGG00000016319	mcts1	96	45.763	Periophthalmus_magnuspinnatus
YER007C-A	TMA20	98	47.778	ENSPEMG00000014914	Mcts1	98	47.778	Peromyscus_maniculatus_bairdii
YER007C-A	TMA20	98	46.369	ENSPCIG00000020929	-	83	46.369	Phascolarctos_cinereus
YER007C-A	TMA20	98	46.667	ENSPFOG00000017218	mcts1	98	46.667	Poecilia_formosa
YER007C-A	TMA20	98	46.667	ENSPLAG00000020181	mcts1	98	46.667	Poecilia_latipinna
YER007C-A	TMA20	98	46.667	ENSPMEG00000023805	mcts1	98	46.667	Poecilia_mexicana
YER007C-A	TMA20	98	46.667	ENSPREG00000011974	mcts1	98	46.667	Poecilia_reticulata
YER007C-A	TMA20	98	47.222	ENSPPYG00000020687	MCTS1	98	47.222	Pongo_abelii
YER007C-A	TMA20	98	47.778	ENSPCOG00000020584	MCTS1	98	47.778	Propithecus_coquereli
YER007C-A	TMA20	95	43.023	ENSPVAG00000013249	-	93	43.023	Pteropus_vampyrus
YER007C-A	TMA20	98	47.222	ENSPNYG00000010081	mcts1	98	47.222	Pundamilia_nyererei
YER007C-A	TMA20	98	46.111	ENSPNAG00000003671	mcts1	98	46.111	Pygocentrus_nattereri
YER007C-A	TMA20	98	47.778	ENSRNOG00000002563	Mcts1	98	47.778	Rattus_norvegicus
YER007C-A	TMA20	52	58.511	ENSRBIG00000035074	MCTS1	94	58.511	Rhinopithecus_bieti
YER007C-A	TMA20	98	47.778	ENSRROG00000039816	MCTS1	98	47.778	Rhinopithecus_roxellana
YER007C-A	TMA20	98	47.778	ENSSBOG00000031550	MCTS1	98	47.778	Saimiri_boliviensis_boliviensis
YER007C-A	TMA20	98	46.667	ENSSHAG00000008366	-	98	46.667	Sarcophilus_harrisii
YER007C-A	TMA20	98	46.667	ENSSFOG00015005757	mcts1	98	46.667	Scleropages_formosus
YER007C-A	TMA20	98	46.667	ENSSMAG00000013065	mcts1	98	46.667	Scophthalmus_maximus
YER007C-A	TMA20	98	46.111	ENSSDUG00000005874	mcts1	98	46.111	Seriola_dumerili
YER007C-A	TMA20	98	46.111	ENSSLDG00000002831	mcts1	98	46.111	Seriola_lalandi_dorsalis
YER007C-A	TMA20	98	46.111	ENSSPUG00000012942	-	98	46.111	Sphenodon_punctatus
YER007C-A	TMA20	98	47.222	ENSSPAG00000009797	mcts1	98	47.222	Stegastes_partitus
YER007C-A	TMA20	98	47.778	ENSSSCG00000039612	-	98	47.778	Sus_scrofa
YER007C-A	TMA20	93	47.059	ENSSSCG00000030833	-	98	47.059	Sus_scrofa
YER007C-A	TMA20	98	45.251	ENSTGUG00000003338	-	98	45.251	Taeniopygia_guttata
YER007C-A	TMA20	98	46.667	ENSTRUG00000009679	mcts1	98	46.667	Takifugu_rubripes
YER007C-A	TMA20	98	46.667	ENSTNIG00000000134	mcts1	98	46.667	Tetraodon_nigroviridis
YER007C-A	TMA20	69	53.600	ENSTBEG00000010666	MCTS1	67	53.600	Tupaia_belangeri
YER007C-A	TMA20	95	46.821	ENSTTRG00000007208	-	93	46.821	Tursiops_truncatus
YER007C-A	TMA20	98	47.222	ENSUAMG00000007223	-	98	47.222	Ursus_americanus
YER007C-A	TMA20	98	47.778	ENSUAMG00000007558	-	98	47.778	Ursus_americanus
YER007C-A	TMA20	98	47.778	ENSUMAG00000022978	-	98	47.778	Ursus_maritimus
YER007C-A	TMA20	98	47.222	ENSUMAG00000012117	-	98	47.222	Ursus_maritimus
YER007C-A	TMA20	95	46.821	ENSVPAG00000001801	-	96	46.821	Vicugna_pacos
YER007C-A	TMA20	89	48.148	ENSVVUG00000028136	-	98	48.148	Vulpes_vulpes
YER007C-A	TMA20	98	47.486	ENSVVUG00000007626	-	85	47.486	Vulpes_vulpes
YER007C-A	TMA20	97	41.573	ENSVVUG00000028523	-	93	41.573	Vulpes_vulpes
YER007C-A	TMA20	98	46.667	ENSXETG00000004472	mcts1	98	46.667	Xenopus_tropicalis
YER007C-A	TMA20	95	45.087	ENSXCOG00000016543	mcts1	89	45.087	Xiphophorus_couchianus
YER007C-A	TMA20	98	46.111	ENSXMAG00000023339	mcts1	98	46.111	Xiphophorus_maculatus