EuRBPDB

Description

Ensembl ID: YER025W (Gene tree)
Gene ID: -
Gene Symbol: GCD11
Alias: SUI4
Full Name: Gamma subunit of the translation initiation factor eIF2%3B involved in the identification of the start codon%3B binds GTP when forming the ternary complex with GTP and tRNAi-Met%3B mutations in human ortholog cause X-linked intellectual disability (XLID)
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 1584 bases
Position: chrV:205251-206834
Accession: S000000827
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YER025W_mRNA	GTP_EFTU	PF00009.27	1.4e-23	1	1
YER025W_mRNA	GTP_EFTU_D2	PF03144.25	2.8e-12	1	1
YER025W_mRNA	eIF2_C	PF09173.11	4.2e-35	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YER025W_mRNA	-	1584	-	YER025W_mRNA	527 (aa)	-	P32481

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YER025W	GCD11	83	66.591	WBGene00021466	eif-2gamma	94	66.591	Caenorhabditis_elegans
YER025W	GCD11	85	72.483	FBgn0263740	eIF2gamma	95	72.584	Drosophila_melanogaster