EuRBPDB

Description

Ensembl ID: YER029C (Gene tree)
Gene ID: -
Gene Symbol: SMB1
Alias: -
Full Name: Core Sm protein Sm B%3B part of heteroheptameric complex (with Smd1p%2C Smd2p%2C Smd3p%2C Sme1p%2C Smx3p%2C and Smx2p) that is part of the spliceosomal U1%2C U2%2C U4%2C and U5 snRNPs%3B homolog of human Sm B and Sm B'
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 591 bases
Position: chrV:212587-213177
Accession: S000000831
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YER029C_mRNA	LSM	PF01423.22	4.4e-22	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YER029C_mRNA	-	591	-	YER029C_mRNA	196 (aa)	-	P40018

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YER029C	SMB1	50	36.364	WBGene00004915	snr-2	54	36.364	Caenorhabditis_elegans