EuRBPDB

Description

Ensembl ID: YER056C-A (Gene tree)
Gene ID: -
Gene Symbol: RPL34A
Alias: -
Full Name: Ribosomal 60S subunit protein L34A%3B homologous to mammalian ribosomal protein L34%2C no bacterial homolog%3B RPL34A has a paralog%2C RPL34B%2C that arose from the whole genome duplication
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Minus strand
Length: 763 bases
Position: chrV:269423-270185
Accession: S000002135
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YER056C-A_mRNA	Ribosomal_L34e	PF01199.18	2.5e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YER056C-A_mRNA	-	366	-	YER056C-A_mRNA	121 (aa)	-	P87262

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YER056C-A	RPL34A	100	98.347	YIL052C	RPL34B	100	98.347

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YER056C-A	RPL34A	91	54.545	WBGene00004448	rpl-34	98	55.556	Caenorhabditis_elegans
YER056C-A	RPL34A	91	50.000	ENSCING00000000338	-	97	50.926	Ciona_intestinalis
YER056C-A	RPL34A	91	51.818	ENSCSAVG00000009906	-	97	52.778	Ciona_savignyi
YER056C-A	RPL34A	92	58.559	FBgn0039406	RpL34a	63	59.804	Drosophila_melanogaster
YER056C-A	RPL34A	92	58.559	FBgn0037686	RpL34b	61	59.804	Drosophila_melanogaster
YER056C-A	RPL34A	90	56.757	ENSSLDG00000008715	-	95	56.757	Seriola_lalandi_dorsalis