EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YER087W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Protein with similarity to tRNA synthetases%3B non-tagged protein is detected in purified mitochondria%3B null mutant is viable and displays elevated frequency of mitochondrial genome loss
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 1731 bases
Position: chrV:330576-332306
Accession: S000000889
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YER087W_mRNA	tRNA-synt_2b	PF00587.25	5.2e-37	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
21124907	A screen for RNA binding proteins in yeast indicates dual functions for many enzymes	ProtoArray & yeast	2010 Nov 11	DOI: 10.1371/journal.pone.0015499

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YER087W_mRNA	-	1731	-	YER087W_mRNA	576 (aa)	-	P39965

Gene Model

Click here to download YER087W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YER087W's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YER087W	-	66	40.244	ENSG00000162396	PARS2	83	40.244	Homo_sapiens
YER087W	-	66	38.528	ENSAPOG00000016537	pars2	82	38.528	Acanthochromis_polyacanthus
YER087W	-	66	38.400	ENSAMEG00000019649	PARS2	83	38.400	Ailuropoda_melanoleuca
YER087W	-	63	40.385	ENSACIG00000013596	pars2	76	40.385	Amphilophus_citrinellus
YER087W	-	65	38.528	ENSAOCG00000023902	pars2	81	38.528	Amphiprion_ocellaris
YER087W	-	62	40.291	ENSAPEG00000010009	pars2	80	40.291	Amphiprion_percula
YER087W	-	67	38.095	ENSATEG00000019329	-	82	38.095	Anabas_testudineus
YER087W	-	67	38.095	ENSATEG00000019166	pars2	82	38.095	Anabas_testudineus
YER087W	-	62	38.942	ENSACAG00000000115	PARS2	76	38.942	Anolis_carolinensis
YER087W	-	63	39.837	ENSANAG00000034319	PARS2	85	39.837	Aotus_nancymaae
YER087W	-	67	36.735	ENSACLG00000009522	pars2	83	36.735	Astatotilapia_calliptera
YER087W	-	60	36.929	ENSAMXG00000033563	-	85	35.878	Astyanax_mexicanus
YER087W	-	66	37.344	ENSAMXG00000032578	pars2	81	37.344	Astyanax_mexicanus
YER087W	-	64	40.090	ENSBTAG00000040313	PARS2	57	40.090	Bos_taurus
YER087W	-	60	32.512	WBGene00004190	pars-2	76	32.512	Caenorhabditis_elegans
YER087W	-	66	39.024	ENSCJAG00000015633	PARS2	83	39.024	Callithrix_jacchus
YER087W	-	64	39.640	ENSCAFG00020012254	PARS2	78	39.640	Canis_lupus_dingo
YER087W	-	66	40.991	ENSCHIG00000004850	PARS2	78	40.991	Capra_hircus
YER087W	-	65	40.773	ENSCAPG00000007226	PARS2	79	40.773	Cavia_aperea
YER087W	-	65	40.773	ENSCPOG00000025477	PARS2	79	40.773	Cavia_porcellus
YER087W	-	66	39.357	ENSCLAG00000016176	PARS2	81	39.357	Chinchilla_lanigera
YER087W	-	66	39.837	ENSCSAG00000000146	PARS2	83	39.837	Chlorocebus_sabaeus
YER087W	-	71	36.735	ENSCPBG00000003691	PARS2	80	36.735	Chrysemys_picta_bellii
YER087W	-	61	37.584	ENSCING00000000992	-	87	37.584	Ciona_intestinalis
YER087W	-	62	34.965	ENSCSAVG00000004773	-	84	34.965	Ciona_savignyi
YER087W	-	66	40.244	ENSCANG00000018730	PARS2	83	40.244	Colobus_angolensis_palliatus
YER087W	-	67	37.805	ENSCGRG00001013821	Pars2	83	37.805	Cricetulus_griseus_chok1gshd
YER087W	-	67	36.992	ENSCGRG00000012554	Pars2	83	36.992	Cricetulus_griseus_crigri
YER087W	-	66	38.528	ENSCSEG00000017559	pars2	82	38.528	Cynoglossus_semilaevis
YER087W	-	65	39.827	ENSCVAG00000011283	pars2	80	39.827	Cyprinodon_variegatus
YER087W	-	70	39.834	ENSDARG00000044404	pars2	82	39.834	Danio_rerio
YER087W	-	69	40.486	ENSDORG00000013567	Pars2	83	40.486	Dipodomys_ordii
YER087W	-	89	34.783	FBgn0027082	ProRS-m	89	34.783	Drosophila_melanogaster
YER087W	-	69	38.372	ENSETEG00000017674	PARS2	89	38.372	Echinops_telfairi
YER087W	-	63	42.857	ENSEBUG00000012814	pars2	71	42.857	Eptatretus_burgeri
YER087W	-	70	39.300	ENSEASG00005014595	PARS2	85	39.300	Equus_asinus_asinus
YER087W	-	69	38.462	ENSFCAG00000022858	PARS2	85	38.462	Felis_catus
YER087W	-	64	36.486	ENSFALG00000012136	PARS2	72	36.486	Ficedula_albicollis
YER087W	-	66	38.400	ENSFDAG00000013750	PARS2	83	38.400	Fukomys_damarensis
YER087W	-	63	39.423	ENSFHEG00000011032	pars2	76	39.423	Fundulus_heteroclitus
YER087W	-	72	34.981	ENSGALG00000010789	PARS2	60	39.024	Gallus_gallus
YER087W	-	65	38.095	ENSGACG00000007240	pars2	81	38.095	Gasterosteus_aculeatus
YER087W	-	52	43.529	ENSGAGG00000014148	PARS2	72	43.529	Gopherus_agassizii
YER087W	-	66	40.244	ENSGGOG00000005426	PARS2	83	40.244	Gorilla_gorilla
YER087W	-	67	36.735	ENSHBUG00000013678	pars2	83	36.735	Haplochromis_burtoni
YER087W	-	66	41.518	ENSHGLG00000003221	PARS2	78	41.518	Heterocephalus_glaber_female
YER087W	-	66	41.518	ENSHGLG00100002370	PARS2	78	41.518	Heterocephalus_glaber_male
YER087W	-	63	41.827	ENSHCOG00000006282	pars2	76	41.827	Hippocampus_comes
YER087W	-	65	39.035	ENSIPUG00000007836	pars2	79	39.035	Ictalurus_punctatus
YER087W	-	63	41.176	ENSSTOG00000012213	PARS2	78	41.176	Ictidomys_tridecemlineatus
YER087W	-	64	38.095	ENSKMAG00000012222	pars2	78	38.095	Kryptolebias_marmoratus
YER087W	-	65	38.362	ENSLBEG00000005842	pars2	83	38.362	Labrus_bergylta
YER087W	-	57	41.954	ENSLBEG00000006420	-	84	41.954	Labrus_bergylta
YER087W	-	66	38.793	ENSLACG00000004845	PARS2	81	38.793	Latimeria_chalumnae
YER087W	-	66	39.301	ENSLOCG00000008678	pars2	77	39.301	Lepisosteus_oculatus
YER087W	-	68	39.394	ENSLAFG00000008727	PARS2	86	39.394	Loxodonta_africana
YER087W	-	66	40.244	ENSMMUG00000032084	PARS2	83	40.244	Macaca_mulatta
YER087W	-	66	40.574	ENSMLEG00000027947	PARS2	83	40.574	Mandrillus_leucophaeus
YER087W	-	64	37.885	ENSMAMG00000008843	pars2	78	37.885	Mastacembelus_armatus
YER087W	-	67	36.735	ENSMZEG00005018397	pars2	83	36.735	Maylandia_zebra
YER087W	-	72	34.981	ENSMGAG00000011416	PARS2	79	34.981	Meleagris_gallopavo
YER087W	-	65	38.889	ENSMAUG00000022043	Pars2	81	38.889	Mesocricetus_auratus
YER087W	-	66	39.819	ENSMOCG00000018351	Pars2	78	39.819	Microtus_ochrogaster
YER087W	-	61	40.670	ENSMMOG00000006550	pars2	74	40.670	Mola_mola
YER087W	-	69	38.934	ENSMODG00000025123	PARS2	83	38.934	Monodelphis_domestica
YER087W	-	65	38.767	ENSMALG00000018954	pars2	80	38.767	Monopterus_albus
YER087W	-	68	38.211	MGP_CAROLIEiJ_G0026236	Pars2	83	38.211	Mus_caroli
YER087W	-	68	37.398	ENSMUSG00000043572	Pars2	83	37.398	Mus_musculus
YER087W	-	66	39.367	MGP_PahariEiJ_G0028570	Pars2	83	36.992	Mus_pahari
YER087W	-	66	39.819	MGP_SPRETEiJ_G0027205	Pars2	83	37.398	Mus_spretus
YER087W	-	64	40.991	ENSMPUG00000020180	PARS2	78	40.991	Mustela_putorius_furo
YER087W	-	63	40.724	ENSMLUG00000016899	PARS2	72	40.724	Myotis_lucifugus
YER087W	-	66	37.805	ENSNGAG00000015140	Pars2	83	37.805	Nannospalax_galili
YER087W	-	63	40.385	ENSNBRG00000020304	pars2	76	40.385	Neolamprologus_brichardi
YER087W	-	66	40.244	ENSNLEG00000003040	PARS2	83	40.244	Nomascus_leucogenys
YER087W	-	64	43.304	ENSOPRG00000016102	PARS2	78	43.304	Ochotona_princeps
YER087W	-	65	40.948	ENSODEG00000020020	PARS2	79	40.948	Octodon_degus
YER087W	-	65	38.739	ENSONIG00000009984	pars2	79	38.739	Oreochromis_niloticus
YER087W	-	60	36.842	ENSOANG00000007752	PARS2	75	36.842	Ornithorhynchus_anatinus
YER087W	-	69	41.296	ENSOCUG00000001045	PARS2	67	41.767	Oryctolagus_cuniculus
YER087W	-	65	37.229	ENSORLG00000025001	pars2	82	37.229	Oryzias_latipes
YER087W	-	65	37.229	ENSORLG00020011316	pars2	75	38.942	Oryzias_latipes_hni
YER087W	-	62	38.942	ENSORLG00015007461	pars2	79	38.942	Oryzias_latipes_hsok
YER087W	-	67	36.735	ENSOMEG00000007136	pars2	84	36.735	Oryzias_melastigma
YER087W	-	66	39.837	ENSOGAG00000031493	PARS2	83	39.837	Otolemur_garnettii
YER087W	-	66	40.991	ENSOARG00000009941	PARS2	77	40.991	Ovis_aries
YER087W	-	66	40.244	ENSPPAG00000001589	PARS2	80	40.244	Pan_paniscus
YER087W	-	68	38.462	ENSPPRG00000020447	PARS2	85	38.462	Panthera_pardus
YER087W	-	68	38.115	ENSPTIG00000004031	PARS2	85	38.115	Panthera_tigris_altaica
YER087W	-	66	40.244	ENSPTRG00000000776	PARS2	83	40.244	Pan_troglodytes
YER087W	-	62	40.385	ENSPKIG00000001336	pars2	68	40.385	Paramormyrops_kingsleyae
YER087W	-	64	37.611	ENSPMGG00000021953	pars2	79	37.611	Periophthalmus_magnuspinnatus
YER087W	-	67	37.398	ENSPEMG00000004864	Pars2	83	37.398	Peromyscus_maniculatus_bairdii
YER087W	-	70	37.278	ENSPMAG00000009138	pars2	93	37.278	Petromyzon_marinus
YER087W	-	65	39.352	ENSPCIG00000018193	PARS2	78	39.352	Phascolarctos_cinereus
YER087W	-	63	40.385	ENSPFOG00000010522	pars2	76	40.385	Poecilia_formosa
YER087W	-	64	39.070	ENSPLAG00000022589	pars2	75	39.070	Poecilia_latipinna
YER087W	-	63	40.385	ENSPMEG00000007151	pars2	74	40.385	Poecilia_mexicana
YER087W	-	64	38.605	ENSPREG00000009788	pars2	78	38.605	Poecilia_reticulata
YER087W	-	67	36.735	ENSPNYG00000012698	pars2	83	36.735	Pundamilia_nyererei
YER087W	-	65	38.596	ENSPNAG00000003869	pars2	79	38.596	Pygocentrus_nattereri
YER087W	-	66	39.819	ENSRNOG00000007327	Pars2	78	39.819	Rattus_norvegicus
YER087W	-	66	40.650	ENSRBIG00000030034	PARS2	83	40.650	Rhinopithecus_bieti
YER087W	-	66	40.650	ENSRROG00000000487	PARS2	83	40.650	Rhinopithecus_roxellana
YER087W	-	68	41.150	ENSSHAG00000004206	PARS2	79	41.150	Sarcophilus_harrisii
YER087W	-	63	40.385	ENSSFOG00015000170	pars2	76	40.385	Scleropages_formosus
YER087W	-	66	37.662	ENSSMAG00000020710	pars2	76	37.662	Scophthalmus_maximus
YER087W	-	65	38.696	ENSSDUG00000012630	pars2	86	38.696	Seriola_dumerili
YER087W	-	65	37.607	ENSSPUG00000014688	PARS2	80	37.607	Sphenodon_punctatus
YER087W	-	64	39.631	ENSSPAG00000023092	pars2	78	39.631	Stegastes_partitus
YER087W	-	71	37.652	ENSSSCG00000003843	PARS2	90	37.652	Sus_scrofa
YER087W	-	67	36.000	ENSTGUG00000009489	PARS2	89	36.000	Taeniopygia_guttata
YER087W	-	66	37.190	ENSTRUG00000018560	pars2	84	37.190	Takifugu_rubripes
YER087W	-	63	39.269	ENSTNIG00000018113	pars2	76	39.269	Tetraodon_nigroviridis
YER087W	-	65	37.652	ENSUAMG00000003814	-	78	37.652	Ursus_americanus
YER087W	-	65	37.652	ENSUAMG00000010990	-	78	37.652	Ursus_americanus
YER087W	-	65	38.057	ENSUMAG00000022250	PARS2	77	38.057	Ursus_maritimus
YER087W	-	64	40.090	ENSVVUG00000026785	PARS2	78	40.090	Vulpes_vulpes
YER087W	-	63	40.865	ENSXCOG00000008574	pars2	78	40.865	Xiphophorus_couchianus
YER087W	-	64	39.535	ENSXMAG00000002269	pars2	78	39.535	Xiphophorus_maculatus