EuRBPDB

Description

Ensembl ID: YER110C (Gene tree)
Gene ID: -
Gene Symbol: KAP123
Alias: YRB4
Full Name: Karyopherin beta%3B mediates nuclear import of ribosomal proteins prior to assembly into ribosomes and import of histones H3 and H4%3B localizes to the nuclear pore%2C nucleus%2C and cytoplasm%3B exhibits genetic interactions with RAI1
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Minus strand
Length: 3342 bases
Position: chrV:378762-382103
Accession: S000000912
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YER110C_mRNA	IBN_N	PF03810.19	5e-18	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127
26595419	Conserved mRNA-binding proteomes in eukaryotic organisms	mRBPome & yeast	2015 Nov 23	Matia Gonzalez AM	DOI: 10.1038/nsmb.3128
20844764	Proteome-wide search reveals unexpected RNA binding proteins in Saccharomyces cerevisiae	MS & yeast	2010 Sep 10	Tsvetanova NG	DOI: 10.1371/journal.pone.0012671

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YER110C_mRNA	-	3342	-	YER110C_mRNA	1113 (aa)	-	P40069

Gene Model

Protein-Protein Interaction (PPI)

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YER110C	KAP123	72	31.967	ENSFHEG00000009351	ipo4	84	31.967	Fundulus_heteroclitus