EuRBPDB

Description

RBDs

RBPome

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: YFL036W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: confidence
Strand: Plus strand
Length: 4056
Position: chrVI:58782-62837
Accession: S000001858
RBP type: canonical RBP
Summary: Mitochondrial RNA polymerase%3B single subunit enzyme similar to those of T3 and T7 bacteriophages%3B requires a specificity subunit encoded by MTF1 for promoter recognition%3B Mtf1p interacts with and stabilizes the Rpo41p-promoter complex%2C enhancing DNA bending and melting to facilitate pre-initiation open complex formation%3B Rpo41p also synthesizes RNA primers for mitochondrial DNA replication

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YFL036W_mRNA	RNA_pol	PF00940.19	2.8e-180	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
26632259	The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs	RIC.PAR_CL & yeast	2015 Dec 3	Beckmann BM	DOI: 10.1038/ncomms10127

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YFL036W_mRNA	-	4056	-	YFL036W_mRNA	1351 (aa)	-	P13433

Gene Model

Click here to download YFL036W's gene model file

Protein-Protein Interaction (PPI)

Clik here to download YFL036W's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YFL036W	-	57	38.734	ENSACIG00000016078	polrmt	67	38.734	Amphilophus_citrinellus
YFL036W	-	57	36.704	ENSATEG00000024025	polrmt	63	36.579	Anabas_testudineus
YFL036W	-	55	36.979	ENSANAG00000032916	POLRMT	59	36.979	Aotus_nancymaae
YFL036W	-	53	37.332	ENSCCAG00000025014	POLRMT	57	37.332	Cebus_capucinus
YFL036W	-	58	34.024	FBgn0261938	mtRNApol	58	34.428	Drosophila_melanogaster
YFL036W	-	50	36.984	ENSEBUG00000013453	-	72	36.467	Eptatretus_burgeri
YFL036W	-	55	37.484	ENSELUG00000019319	polrmt	55	37.484	Esox_lucius
YFL036W	-	57	36.948	ENSHCOG00000001565	polrmt	63	36.783	Hippocampus_comes
YFL036W	-	57	37.922	ENSKMAG00000004426	polrmt	60	37.922	Kryptolebias_marmoratus
YFL036W	-	61	37.266	ENSLBEG00000016529	polrmt	61	37.266	Labrus_bergylta
YFL036W	-	53	37.450	ENSLACG00000011518	POLRMT	59	37.450	Latimeria_chalumnae
YFL036W	-	52	38.533	MGP_PahariEiJ_G0030951	Polrmt	91	41.966	Mus_pahari
YFL036W	-	54	37.666	ENSMLUG00000009223	POLRMT	59	37.666	Myotis_lucifugus
YFL036W	-	57	38.306	ENSONIG00000002405	polrmt	66	38.306	Oreochromis_niloticus
YFL036W	-	57	37.688	ENSORLG00000004329	polrmt	57	37.688	Oryzias_latipes
YFL036W	-	57	37.688	ENSORLG00020003896	polrmt	60	37.688	Oryzias_latipes_hni
YFL036W	-	57	38.279	ENSORLG00015022238	polrmt	57	38.279	Oryzias_latipes_hsok
YFL036W	-	55	37.813	ENSOMEG00000008292	polrmt	56	37.813	Oryzias_melastigma
YFL036W	-	50	39.797	ENSPTRG00000010157	POLRMT	51	39.797	Pan_troglodytes
YFL036W	-	56	37.563	ENSPKIG00000024580	polrmt	59	37.563	Paramormyrops_kingsleyae
YFL036W	-	58	35.000	ENSPVAG00000008403	POLRMT	63	35.000	Pteropus_vampyrus
YFL036W	-	57	38.375	ENSPNAG00000019790	polrmt	62	38.375	Pygocentrus_nattereri
YFL036W	-	53	37.483	ENSSBOG00000025388	POLRMT	57	37.483	Saimiri_boliviensis_boliviensis
YFL036W	-	61	37.470	ENSSLDG00000010643	polrmt	67	37.470	Seriola_lalandi_dorsalis
YFL036W	-	57	37.875	ENSSPAG00000018740	polrmt	59	37.875	Stegastes_partitus
YFL036W	-	59	36.823	ENSTNIG00000010642	polrmt	79	36.823	Tetraodon_nigroviridis