EuRBPDB

Description

Ensembl ID: YFR038W (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: Putative ATPase containing the DEAD/H helicase-related sequence motif%3B null mutant displays increased levels of spontaneous Rad52p foci%3B SWAT-GFP and mCherry fusion proteins localize to the nucleus
Gene Type: protein_coding
Species: Saccharomyces_cerevisiae
Status: putative
Strand: Plus strand
Length: 2562 bases
Position: chrVI:229380-231941
Accession: S000001934
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
YFR038W_mRNA	ResIII	PF04851.15	6.4e-09	1	1
YFR038W_mRNA	DEAD	PF00270.29	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
YFR038W_mRNA	-	2562	-	YFR038W_mRNA	853 (aa)	-	P43610

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
YFR038W	-	65	34.966	YAL019W	-	52	40.397
YFR038W	-	51	40.667	YBR073W	RDH54	50	40.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
YFR038W	-	68	41.500	ENSCING00000006076	-	71	41.500	Ciona_intestinalis
YFR038W	-	72	42.147	ENSCSAVG00000007529	-	84	44.283	Ciona_savignyi